RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 RTN4Q9NQC3 1192 aaKnown RBP21.73■■□□□ 1.07
ERBB2-205ENST00000578199 HDGFL1Q5TGJ6 251 aa21.73■■□□□ 1.07
ERBB2-205ENST00000578199 KCNQ3O43525 872 aa21.72■■□□□ 1.07
ERBB2-205ENST00000578199 DDIT3P35638 169 aa21.72■■□□□ 1.07
ERBB2-205ENST00000578199 USP54Q70EL1 1684 aa21.72■■□□□ 1.07
ERBB2-205ENST00000578199 FAM208AQ9UK61 1670 aaKnown RBP21.71■■□□□ 1.07
ERBB2-205ENST00000578199 NCOA3Q9Y6Q9 1424 aa21.71■■□□□ 1.07
ERBB2-205ENST00000578199 RGPD2P0DJD1 1756 aa21.71■■□□□ 1.07
ERBB2-205ENST00000578199 NFAT5O94916 1531 aa21.7■■□□□ 1.06
ERBB2-205ENST00000578199 GZF1Q9H116 711 aaPredicted RBP21.7■■□□□ 1.06
ERBB2-205ENST00000578199 LRRFIP2Q9Y608 721 aaKnown RBP21.7■■□□□ 1.06
ERBB2-205ENST00000578199 MPRIPQ6WCQ1 1025 aa21.7■■□□□ 1.06
ERBB2-205ENST00000578199 USP26Q9BXU7 913 aa21.7■■□□□ 1.06
ERBB2-205ENST00000578199 ADGRL3Q9HAR2 1447 aa21.7■■□□□ 1.06
ERBB2-205ENST00000578199 HSP90AA1P07900 732 aaKnown RBP21.69■■□□□ 1.06
ERBB2-205ENST00000578199 K7ELQ4 463 aaPredicted RBP21.68■■□□□ 1.06
ERBB2-205ENST00000578199 GCP02774 474 aa21.68■■□□□ 1.06
ERBB2-205ENST00000578199 PDE1AP54750 535 aa21.68■■□□□ 1.06
ERBB2-205ENST00000578199 ARXQ96QS3 562 aa21.68■■□□□ 1.06
ERBB2-205ENST00000578199 USP44Q9H0E7 712 aa21.68■■□□□ 1.06
ERBB2-205ENST00000578199 ANXA1P04083 346 aa21.68■■□□□ 1.06
ERBB2-205ENST00000578199 GNAI3P08754 354 aa21.68■■□□□ 1.06
ERBB2-205ENST00000578199 KCNH5Q8NCM2 988 aa21.68■■□□□ 1.06
ERBB2-205ENST00000578199 CEMIPQ8WUJ3 1361 aa21.67■■□□□ 1.06
ERBB2-205ENST00000578199 ATP8B2P98198 1209 aa21.67■■□□□ 1.06
ERBB2-205ENST00000578199 EIF4A1P60842 406 aaKnown RBP21.66■■□□□ 1.06
ERBB2-205ENST00000578199 ZNF530Q6P9A1 599 aaPredicted RBP21.66■■□□□ 1.06
ERBB2-205ENST00000578199 TNPO1Q92973 898 aaKnown RBP21.65■■□□□ 1.06
ERBB2-205ENST00000578199 LRRCC1Q9C099 1032 aa21.65■■□□□ 1.06
ERBB2-205ENST00000578199 BABAM1Q9NWV8 329 aa21.65■■□□□ 1.06
ERBB2-205ENST00000578199 CHPF2Q9P2E5 772 aa21.65■■□□□ 1.06
ERBB2-205ENST00000578199 AXIN2Q9Y2T1 843 aa21.64■■□□□ 1.06
ERBB2-205ENST00000578199 NPHP4O75161 1426 aaPredicted RBP21.64■■□□□ 1.05
ERBB2-205ENST00000578199 BTBD11A6QL63 1104 aa21.63■■□□□ 1.05
ERBB2-205ENST00000578199 TRAK2O60296 914 aa21.63■■□□□ 1.05
ERBB2-205ENST00000578199 UBTFL1P0CB47 393 aaPredicted RBP21.63■■□□□ 1.05
ERBB2-205ENST00000578199 TEFQ10587 303 aa21.63■■□□□ 1.05
ERBB2-205ENST00000578199 CASC1Q6TDU7 716 aa21.63■■□□□ 1.05
ERBB2-205ENST00000578199 ARHGEF25Q86VW2 580 aa21.63■■□□□ 1.05
ERBB2-205ENST00000578199 ZNF142P52746 1687 aaPredicted RBP21.62■■□□□ 1.05
ERBB2-205ENST00000578199 OSBPL3Q9H4L5 887 aa21.62■■□□□ 1.05
ERBB2-205ENST00000578199 ANKRD24Q8TF21 1146 aa21.62■■□□□ 1.05
ERBB2-205ENST00000578199 IL1RAPL2Q9NP60 686 aa21.62■■□□□ 1.05
ERBB2-205ENST00000578199 AKAP4Q5JQC9 854 aa21.61■■□□□ 1.05
ERBB2-205ENST00000578199 SALL3Q9BXA9 1300 aa21.61■■□□□ 1.05
ERBB2-205ENST00000578199 PI4KAP2A4QPH2 592 aa21.61■■□□□ 1.05
ERBB2-205ENST00000578199 NBPF7P0C2Y1 421 aaPredicted RBP21.61■■□□□ 1.05
ERBB2-205ENST00000578199 PLEKHO1Q53GL0 409 aaPredicted RBP21.61■■□□□ 1.05
ERBB2-205ENST00000578199 PI4KAP1Q8N8J0 262 aa21.61■■□□□ 1.05
ERBB2-205ENST00000578199 CACNA1FO60840 1977 aa21.61■■□□□ 1.05
ERBB2-205ENST00000578199 SOS1Q07889 1333 aaPredicted RBP21.6■■□□□ 1.05
ERBB2-205ENST00000578199 MX1P20591 662 aa21.6■■□□□ 1.05
ERBB2-205ENST00000578199 RABEP1Q15276 862 aa21.6■■□□□ 1.05
ERBB2-205ENST00000578199 PROSER2Q86WR7 435 aaPredicted RBP21.6■■□□□ 1.05
ERBB2-205ENST00000578199 IBTKQ9P2D0 1353 aaPredicted RBP21.6■■□□□ 1.05
ERBB2-205ENST00000578199 RAB3GAP1Q15042 981 aa21.6■■□□□ 1.05
ERBB2-205ENST00000578199 KRT28Q7Z3Y7 464 aa21.6■■□□□ 1.05
ERBB2-205ENST00000578199 SRCIN1Q9C0H9 1055 aa21.6■■□□□ 1.05
ERBB2-205ENST00000578199 PRAMEF22A3QJZ6 481 aa21.59■■□□□ 1.05
ERBB2-205ENST00000578199 RILPL2Q969X0 211 aa21.59■■□□□ 1.05
ERBB2-205ENST00000578199 PXDNQ92626 1479 aa21.59■■□□□ 1.05
ERBB2-205ENST00000578199 PPP1R42Q7Z4L9 355 aa21.59■■□□□ 1.05
ERBB2-205ENST00000578199 ERC2O15083 957 aa21.58■■□□□ 1.05
ERBB2-205ENST00000578199 ZC3H6P61129 1189 aaKnown RBP21.58■■□□□ 1.05
ERBB2-205ENST00000578199 DDX17Q92841 729 aaKnown RBP21.58■■□□□ 1.05
ERBB2-205ENST00000578199 TRIM6-TRIM34B2RNG4 842 aa21.58■■□□□ 1.04
ERBB2-205ENST00000578199 RNMTO43148 476 aaKnown RBP21.58■■□□□ 1.04
ERBB2-205ENST00000578199 ADAMTSL3P82987 1691 aa21.57■■□□□ 1.04
ERBB2-205ENST00000578199 SSFA2P28290 1259 aa21.57■■□□□ 1.04
ERBB2-205ENST00000578199 C1orf141Q5JVX7 400 aa21.57■■□□□ 1.04
ERBB2-205ENST00000578199 NUTM1Q86Y26 1132 aa21.57■■□□□ 1.04
ERBB2-205ENST00000578199 UNC5CLQ8IV45 518 aa21.57■■□□□ 1.04
ERBB2-205ENST00000578199 CIZ1Q9ULV3 898 aaPredicted RBP21.57■■□□□ 1.04
ERBB2-205ENST00000578199 AK9Q5TCS8 1911 aa21.57■■□□□ 1.04
ERBB2-205ENST00000578199 SURF6O75683 361 aaKnown RBP21.56■■□□□ 1.04
ERBB2-205ENST00000578199 REC8O95072 547 aa21.56■■□□□ 1.04
ERBB2-205ENST00000578199 BEND3Q5T5X7 828 aa21.56■■□□□ 1.04
ERBB2-205ENST00000578199 DNAAF4Q8WXU2 420 aa21.56■■□□□ 1.04
ERBB2-205ENST00000578199 MED1Q15648 1581 aaPredicted RBP21.55■■□□□ 1.04
ERBB2-205ENST00000578199 PROSER3Q2NL68 480 aa21.55■■□□□ 1.04
ERBB2-205ENST00000578199 SSH3Q8TE77 659 aa21.55■■□□□ 1.04
ERBB2-205ENST00000578199 SRGAP3O43295 1099 aa21.55■■□□□ 1.04
ERBB2-205ENST00000578199 AMOTQ4VCS5 1084 aa21.55■■□□□ 1.04
ERBB2-205ENST00000578199 KDM3BQ7LBC6 1761 aa21.54■■□□□ 1.04
ERBB2-205ENST00000578199 DDX11L8A8MPP1 907 aa21.54■■□□□ 1.04
ERBB2-205ENST00000578199 EIF5BO60841 1220 aaKnown RBP21.54■■□□□ 1.04
ERBB2-205ENST00000578199 MAP4K4O95819 1239 aaPredicted RBP21.54■■□□□ 1.04
ERBB2-205ENST00000578199 PXDNLA1KZ92 1463 aa21.54■■□□□ 1.04
ERBB2-205ENST00000578199 ESYT1Q9BSJ8 1104 aa21.53■■□□□ 1.04
ERBB2-205ENST00000578199 LMO7Q8WWI1 1683 aa21.52■■□□□ 1.04
ERBB2-205ENST00000578199 ADCY9O60503 1353 aa21.52■■□□□ 1.04
ERBB2-205ENST00000578199 GIGYF1O75420 1035 aaPredicted RBP21.51■■□□□ 1.03
ERBB2-205ENST00000578199 HOXB7P09629 217 aa21.51■■□□□ 1.03
ERBB2-205ENST00000578199 CHMLP26374 656 aa21.51■■□□□ 1.03
ERBB2-205ENST00000578199 PKP1Q13835 747 aa21.51■■□□□ 1.03
ERBB2-205ENST00000578199 GBP4Q96PP9 640 aa21.51■■□□□ 1.03
ERBB2-205ENST00000578199 ZGPATQ8N5A5 531 aaKnown RBP21.51■■□□□ 1.03
ERBB2-205ENST00000578199 STAP2Q9UGK3 403 aa21.51■■□□□ 1.03
ERBB2-205ENST00000578199 SLIT3O75094 1523 aa21.51■■□□□ 1.03
ERBB2-205ENST00000578199 PHRF1Q9P1Y6 1649 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms