RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 C5P01031 1676 aa29.57■■■□□ 2.32
SMARCD2-206ENST00000577990 PHACTR3Q96KR7 559 aa29.57■■■□□ 2.32
SMARCD2-206ENST00000577990 TAF1LQ8IZX4 1826 aa29.57■■■□□ 2.32
SMARCD2-206ENST00000577990 ASAP1Q9ULH1 1129 aa29.56■■■□□ 2.32
SMARCD2-206ENST00000577990 ADAMTS7Q9UKP4 1686 aa29.56■■■□□ 2.32
SMARCD2-206ENST00000577990 MAP3K5Q99683 1374 aa29.55■■■□□ 2.32
SMARCD2-206ENST00000577990 RNMTO43148 476 aaKnown RBP29.55■■■□□ 2.32
SMARCD2-206ENST00000577990 LGR6Q9HBX8 967 aa29.54■■■□□ 2.32
SMARCD2-206ENST00000577990 ATG3Q9NT62 314 aa29.54■■■□□ 2.32
SMARCD2-206ENST00000577990 MRC1P22897 1456 aa29.54■■■□□ 2.32
SMARCD2-206ENST00000577990 PNPLA7Q6ZV29 1317 aa29.53■■■□□ 2.32
SMARCD2-206ENST00000577990 SGIP1Q9BQI5 828 aa29.53■■■□□ 2.32
SMARCD2-206ENST00000577990 GNAT3A8MTJ3 354 aa29.52■■■□□ 2.32
SMARCD2-206ENST00000577990 NFATC2IPQ8NCF5 419 aa29.52■■■□□ 2.32
SMARCD2-206ENST00000577990 TFCP2L1Q9NZI6 479 aa29.52■■■□□ 2.32
SMARCD2-206ENST00000577990 SLC52A2Q9HAB3 445 aa29.51■■■□□ 2.31
SMARCD2-206ENST00000577990 LOC102724428A0A0B4J2F2 783 aa29.5■■■□□ 2.31
SMARCD2-206ENST00000577990 SIK1P57059 783 aa29.5■■■□□ 2.31
SMARCD2-206ENST00000577990 HMGB2P26583 209 aaKnown RBP29.49■■■□□ 2.31
SMARCD2-206ENST00000577990 COL24A1Q17RW2 1714 aa29.48■■■□□ 2.31
SMARCD2-206ENST00000577990 NEFMP07197 916 aa29.48■■■□□ 2.31
SMARCD2-206ENST00000577990 FHDC1Q9C0D6 1143 aaPredicted RBP29.48■■■□□ 2.31
SMARCD2-206ENST00000577990 PNNQ9H307 717 aaKnown RBP29.47■■■□□ 2.31
SMARCD2-206ENST00000577990 PLEKHF1Q96S99 279 aa29.46■■■□□ 2.31
SMARCD2-206ENST00000577990 IL17REQ8NFR9 667 aa29.45■■■□□ 2.31
SMARCD2-206ENST00000577990 ARXQ96QS3 562 aa29.44■■■□□ 2.3
SMARCD2-206ENST00000577990 C4BP0C0L5 1744 aa29.44■■■□□ 2.3
SMARCD2-206ENST00000577990 ATP6V1AP38606 617 aa29.43■■■□□ 2.3
SMARCD2-206ENST00000577990 RBM42Q9BTD8 480 aaKnown RBP29.43■■■□□ 2.3
SMARCD2-206ENST00000577990 ZNF831Q5JPB2 1677 aa29.43■■■□□ 2.3
SMARCD2-206ENST00000577990 MAPK8IP3Q9UPT6 1336 aa29.43■■■□□ 2.3
SMARCD2-206ENST00000577990 CEMIPQ8WUJ3 1361 aa29.42■■■□□ 2.3
SMARCD2-206ENST00000577990 WDR43Q15061 677 aaKnown RBP eCLIP29.42■■■□□ 2.3
SMARCD2-206ENST00000577990 SYT17Q9BSW7 474 aa29.42■■■□□ 2.3
SMARCD2-206ENST00000577990 UTRNP46939 3433 aa29.42■■■□□ 2.3
SMARCD2-206ENST00000577990 MSH5O43196 834 aa29.41■■■□□ 2.3
SMARCD2-206ENST00000577990 ANP32CO43423 234 aa29.41■■■□□ 2.3
SMARCD2-206ENST00000577990 TEFQ10587 303 aa29.41■■■□□ 2.3
SMARCD2-206ENST00000577990 ITPK1Q13572 414 aa29.41■■■□□ 2.3
SMARCD2-206ENST00000577990 SLC16A10Q8TF71 515 aa29.41■■■□□ 2.3
SMARCD2-206ENST00000577990 SIPA1L3O60292 1781 aaPredicted RBP29.4■■■□□ 2.3
SMARCD2-206ENST00000577990 LINC00116Q8NCU8 138 aa29.4■■■□□ 2.3
SMARCD2-206ENST00000577990 RTF1Q92541 710 aaKnown RBP29.4■■■□□ 2.3
SMARCD2-206ENST00000577990 SLC4A9Q96Q91 983 aa29.4■■■□□ 2.3
SMARCD2-206ENST00000577990 DCAF8L1A6NGE4 600 aa29.39■■■□□ 2.3
SMARCD2-206ENST00000577990 PTCD1O75127 700 aaKnown RBP29.39■■■□□ 2.3
SMARCD2-206ENST00000577990 COL23A1Q86Y22 540 aaPredicted RBP29.39■■■□□ 2.3
SMARCD2-206ENST00000577990 UBR3Q6ZT12 1888 aa29.39■■■□□ 2.3
SMARCD2-206ENST00000577990 HTATSF1O43719 755 aaKnown RBP29.38■■■□□ 2.29
SMARCD2-206ENST00000577990 DLG5Q8TDM6 1919 aa29.37■■■□□ 2.29
SMARCD2-206ENST00000577990 SLC39A6Q13433 755 aa29.37■■■□□ 2.29
SMARCD2-206ENST00000577990 NFE2L2Q16236 605 aa29.37■■■□□ 2.29
SMARCD2-206ENST00000577990 AK7Q96M32 723 aa29.37■■■□□ 2.29
SMARCD2-206ENST00000577990 POLD1P28340 1107 aa29.36■■■□□ 2.29
SMARCD2-206ENST00000577990 KLHL34Q8N239 644 aa29.36■■■□□ 2.29
SMARCD2-206ENST00000577990 COL5A3P25940 1745 aaPredicted RBP29.35■■■□□ 2.29
SMARCD2-206ENST00000577990 MCM10Q7L590 875 aa29.35■■■□□ 2.29
SMARCD2-206ENST00000577990 KCPQ6ZWJ8 1503 aa29.35■■■□□ 2.29
SMARCD2-206ENST00000577990 CICQ96RK0 1608 aaPredicted RBP29.34■■■□□ 2.29
SMARCD2-206ENST00000577990 MSL1Q68DK7 614 aa29.34■■■□□ 2.29
SMARCD2-206ENST00000577990 DCTN1Q14203 1278 aa29.33■■■□□ 2.29
SMARCD2-206ENST00000577990 AMIGO3Q86WK7 504 aa29.33■■■□□ 2.29
SMARCD2-206ENST00000577990 ADAMTS8Q9UP79 889 aa29.33■■■□□ 2.29
SMARCD2-206ENST00000577990 TJP1Q07157 1748 aa29.33■■■□□ 2.29
SMARCD2-206ENST00000577990 UBR2Q8IWV8 1755 aa29.33■■■□□ 2.29
SMARCD2-206ENST00000577990 SMIM5Q71RC9 77 aa29.32■■■□□ 2.28
SMARCD2-206ENST00000577990 TTC5Q8N0Z6 440 aa29.32■■■□□ 2.28
SMARCD2-206ENST00000577990 GOLGB1Q14789 3259 aaKnown RBP29.31■■■□□ 2.28
SMARCD2-206ENST00000577990 YY1P25490 414 aa29.31■■■□□ 2.28
SMARCD2-206ENST00000577990 CCDC146Q8IYE0 955 aa29.31■■■□□ 2.28
SMARCD2-206ENST00000577990 FLAD1Q8NFF5 587 aa29.3■■■□□ 2.28
SMARCD2-206ENST00000577990 CNTNAP4Q9C0A0 1308 aa29.29■■■□□ 2.28
SMARCD2-206ENST00000577990 CCDC184Q52MB2 194 aa29.29■■■□□ 2.28
SMARCD2-206ENST00000577990 ZNF790Q6PG37 636 aa29.29■■■□□ 2.28
SMARCD2-206ENST00000577990 RUNDC1Q96C34 613 aa29.29■■■□□ 2.28
SMARCD2-206ENST00000577990 BTBD11A6QL63 1104 aa29.28■■■□□ 2.28
SMARCD2-206ENST00000577990 GNPATO15228 680 aa29.28■■■□□ 2.28
SMARCD2-206ENST00000577990 PHF14O94880 888 aa29.28■■■□□ 2.28
SMARCD2-206ENST00000577990 SSFA2P28290 1259 aa29.27■■■□□ 2.28
SMARCD2-206ENST00000577990 RC3H1Q5TC82 1133 aaKnown RBP29.27■■■□□ 2.28
SMARCD2-206ENST00000577990 TMPOP42166 694 aaKnown RBP29.26■■■□□ 2.27
SMARCD2-206ENST00000577990 VSIG10Q8N0Z9 540 aa29.26■■■□□ 2.27
SMARCD2-206ENST00000577990 MYH14Q7Z406 1995 aaKnown RBP29.25■■■□□ 2.27
SMARCD2-206ENST00000577990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.25■■■□□ 2.27
SMARCD2-206ENST00000577990 RIPK4P57078 832 aa29.25■■■□□ 2.27
SMARCD2-206ENST00000577990 DNAJC10Q8IXB1 793 aa29.25■■■□□ 2.27
SMARCD2-206ENST00000577990 CHD4Q14839 1912 aa29.25■■■□□ 2.27
SMARCD2-206ENST00000577990 CRKLP46109 303 aaKnown RBP29.23■■■□□ 2.27
SMARCD2-206ENST00000577990 NLGN2Q8NFZ4 835 aa29.23■■■□□ 2.27
SMARCD2-206ENST00000577990 ZNF496Q96IT1 587 aaPredicted RBP29.23■■■□□ 2.27
SMARCD2-206ENST00000577990 MRS2Q9HD23 443 aa29.23■■■□□ 2.27
SMARCD2-206ENST00000577990 LMOD3Q0VAK6 560 aa29.22■■■□□ 2.27
SMARCD2-206ENST00000577990 TAF7Q15545 349 aaPredicted RBP29.22■■■□□ 2.27
SMARCD2-206ENST00000577990 FMNL2Q96PY5 1086 aa29.22■■■□□ 2.27
SMARCD2-206ENST00000577990 THUMPD2Q9BTF0 503 aaKnown RBP29.22■■■□□ 2.27
SMARCD2-206ENST00000577990 RTCBQ9Y3I0 505 aaKnown RBP29.22■■■□□ 2.27
SMARCD2-206ENST00000577990 HEG1Q9ULI3 1381 aa29.22■■■□□ 2.27
SMARCD2-206ENST00000577990 KCNQ3O43525 872 aa29.21■■■□□ 2.27
SMARCD2-206ENST00000577990 RRP7AQ9Y3A4 280 aaKnown RBP29.21■■■□□ 2.27
SMARCD2-206ENST00000577990 RPS6KA4O75676 772 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms