RNA–Protein interactions for RNA: ENST00000577681.1

CCL13-202, Transcript of C-C motif chemokine ligand 13, humanhuman

TSL 1 (best)

Gene CCL13, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-202ENST00000577681 AKAP4Q5JQC9 854 aa10.6□□□□□ -0.71
CCL13-202ENST00000577681 IFNL2Q8IZJ0 200 aa10.6□□□□□ -0.71
CCL13-202ENST00000577681 MARCH10Q8NA82 808 aaPredicted RBP10.6□□□□□ -0.71
CCL13-202ENST00000577681 PHACTR3Q96KR7 559 aa10.6□□□□□ -0.71
CCL13-202ENST00000577681 PPP1R1BQ9UD71 204 aaPredicted RBP10.6□□□□□ -0.71
CCL13-202ENST00000577681 APBA3O96018 575 aa10.59□□□□□ -0.71
CCL13-202ENST00000577681 PHKG2P15735 406 aa10.59□□□□□ -0.71
CCL13-202ENST00000577681 PDE3BQ13370 1112 aa10.59□□□□□ -0.71
CCL13-202ENST00000577681 MTHFSDQ2M296 383 aaKnown RBP10.59□□□□□ -0.71
CCL13-202ENST00000577681 NEFMP07197 916 aa10.58□□□□□ -0.72
CCL13-202ENST00000577681 NFE2L2Q16236 605 aa10.58□□□□□ -0.72
CCL13-202ENST00000577681 FAM196AQ6ZSG2 479 aa10.58□□□□□ -0.72
CCL13-202ENST00000577681 CAMKK2Q96RR4 588 aa10.58□□□□□ -0.72
CCL13-202ENST00000577681 ITGB4P16144 1822 aa10.58□□□□□ -0.72
CCL13-202ENST00000577681 SIPA1L3O60292 1781 aaPredicted RBP10.57□□□□□ -0.72
CCL13-202ENST00000577681 NHSQ6T4R5 1651 aa10.57□□□□□ -0.72
CCL13-202ENST00000577681 MRC1P22897 1456 aa10.57□□□□□ -0.72
CCL13-202ENST00000577681 CEMIPQ8WUJ3 1361 aa10.57□□□□□ -0.72
CCL13-202ENST00000577681 TMPOP42166 694 aaKnown RBP10.57□□□□□ -0.72
CCL13-202ENST00000577681 CCDC27Q2M243 656 aa10.57□□□□□ -0.72
CCL13-202ENST00000577681 NBPF14Q5TI25 921 aa10.57□□□□□ -0.72
CCL13-202ENST00000577681 ZNF530Q6P9A1 599 aaPredicted RBP10.57□□□□□ -0.72
CCL13-202ENST00000577681 DCAF5Q96JK2 942 aa10.57□□□□□ -0.72
CCL13-202ENST00000577681 TOGARAM1Q9Y4F4 1720 aa10.57□□□□□ -0.72
CCL13-202ENST00000577681 MAPK8IP3Q9UPT6 1336 aa10.57□□□□□ -0.72
CCL13-202ENST00000577681 MAP3K5Q99683 1374 aa10.56□□□□□ -0.72
CCL13-202ENST00000577681 GNAT3A8MTJ3 354 aa10.56□□□□□ -0.72
CCL13-202ENST00000577681 ERVV-2B6SEH9 535 aa10.56□□□□□ -0.72
CCL13-202ENST00000577681 C1orf141Q5JVX7 400 aa10.56□□□□□ -0.72
CCL13-202ENST00000577681 KDM6AO15550 1401 aaPredicted RBP10.56□□□□□ -0.72
CCL13-202ENST00000577681 DOT1LQ8TEK3 1739 aa10.55□□□□□ -0.72
CCL13-202ENST00000577681 LMOD3Q0VAK6 560 aa10.55□□□□□ -0.72
CCL13-202ENST00000577681 RGPD3A6NKT7 1758 aaPredicted RBP10.54□□□□□ -0.72
CCL13-202ENST00000577681 RGPD4Q7Z3J3 1758 aa10.54□□□□□ -0.72
CCL13-202ENST00000577681 KAT6BQ8WYB5 2073 aa10.54□□□□□ -0.72
CCL13-202ENST00000577681 DDX54Q8TDD1 881 aaKnown RBP10.54□□□□□ -0.72
CCL13-202ENST00000577681 SPON1Q9HCB6 807 aa10.54□□□□□ -0.72
CCL13-202ENST00000577681 ZNF831Q5JPB2 1677 aa10.53□□□□□ -0.72
CCL13-202ENST00000577681 TNS1Q9HBL0 1735 aaKnown RBP10.53□□□□□ -0.72
CCL13-202ENST00000577681 APAF1O14727 1248 aa10.53□□□□□ -0.72
CCL13-202ENST00000577681 RNMTO43148 476 aaKnown RBP10.53□□□□□ -0.72
CCL13-202ENST00000577681 FAM9BQ8IZU0 186 aa10.53□□□□□ -0.72
CCL13-202ENST00000577681 IL17REQ8NFR9 667 aa10.53□□□□□ -0.72
CCL13-202ENST00000577681 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
CCL13-202ENST00000577681 BABAM1Q9NWV8 329 aa10.53□□□□□ -0.72
CCL13-202ENST00000577681 TRIM35Q9UPQ4 493 aa10.53□□□□□ -0.72
CCL13-202ENST00000577681 BTAF1O14981 1849 aa10.52□□□□□ -0.73
CCL13-202ENST00000577681 RIPK4P57078 832 aa10.52□□□□□ -0.73
CCL13-202ENST00000577681 CCDC146Q8IYE0 955 aa10.52□□□□□ -0.73
CCL13-202ENST00000577681 PAPPAQ13219 1627 aa10.51□□□□□ -0.73
CCL13-202ENST00000577681 CICQ96RK0 1608 aaPredicted RBP10.51□□□□□ -0.73
CCL13-202ENST00000577681 KCNQ2O43526 872 aa10.51□□□□□ -0.73
CCL13-202ENST00000577681 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
CCL13-202ENST00000577681 SLC52A2Q9HAB3 445 aa10.51□□□□□ -0.73
CCL13-202ENST00000577681 LGR6Q9HBX8 967 aa10.51□□□□□ -0.73
CCL13-202ENST00000577681 UTRNP46939 3433 aa10.51□□□□□ -0.73
CCL13-202ENST00000577681 ZNF521Q96K83 1311 aa10.51□□□□□ -0.73
CCL13-202ENST00000577681 LY75O60449 1722 aa10.5□□□□□ -0.73
CCL13-202ENST00000577681 UBR2Q8IWV8 1755 aa10.5□□□□□ -0.73
CCL13-202ENST00000577681 PLSCR1O15162 318 aa10.5□□□□□ -0.73
CCL13-202ENST00000577681 FXR2P51116 673 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCL13-202ENST00000577681 MPRIPQ6WCQ1 1025 aa10.5□□□□□ -0.73
CCL13-202ENST00000577681 WDR63Q8IWG1 891 aa10.5□□□□□ -0.73
CCL13-202ENST00000577681 RTF1Q92541 710 aaKnown RBP10.5□□□□□ -0.73
CCL13-202ENST00000577681 IL16Q14005 1332 aa10.5□□□□□ -0.73
CCL13-202ENST00000577681 KDM3BQ7LBC6 1761 aa10.49□□□□□ -0.73
CCL13-202ENST00000577681 PRIM1P49642 420 aaKnown RBP10.49□□□□□ -0.73
CCL13-202ENST00000577681 CALD1Q05682 793 aaKnown RBP10.49□□□□□ -0.73
CCL13-202ENST00000577681 WWC1Q8IX03 1113 aa10.49□□□□□ -0.73
CCL13-202ENST00000577681 PIGBQ92521 554 aa10.49□□□□□ -0.73
CCL13-202ENST00000577681 SENP3-EIF4A1A0A087X0R7 540 aa10.48□□□□□ -0.73
CCL13-202ENST00000577681 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
CCL13-202ENST00000577681 ZNF853P0CG23 659 aa10.48□□□□□ -0.73
CCL13-202ENST00000577681 HMGB2P26583 209 aaKnown RBP10.48□□□□□ -0.73
CCL13-202ENST00000577681 CABP4P57796 275 aa10.48□□□□□ -0.73
CCL13-202ENST00000577681 TAF7Q15545 349 aaPredicted RBP10.48□□□□□ -0.73
CCL13-202ENST00000577681 NFATC2IPQ8NCF5 419 aa10.48□□□□□ -0.73
CCL13-202ENST00000577681 TMOD3Q9NYL9 352 aa10.48□□□□□ -0.73
CCL13-202ENST00000577681 CHL1O00533 1208 aa10.47□□□□□ -0.73
CCL13-202ENST00000577681 TEFQ10587 303 aa10.47□□□□□ -0.73
CCL13-202ENST00000577681 MCM10Q7L590 875 aa10.47□□□□□ -0.73
CCL13-202ENST00000577681 ZNF784Q8NCA9 323 aaPredicted RBP10.47□□□□□ -0.73
CCL13-202ENST00000577681 SMARCC1Q92922 1105 aaPredicted RBP10.47□□□□□ -0.73
CCL13-202ENST00000577681 CFAP44Q96MT7 982 aa10.47□□□□□ -0.73
CCL13-202ENST00000577681 HEG1Q9ULI3 1381 aa10.47□□□□□ -0.73
CCL13-202ENST00000577681 ATG3Q9NT62 314 aa10.46□□□□□ -0.73
CCL13-202ENST00000577681 IFT57Q9NWB7 429 aa10.46□□□□□ -0.73
CCL13-202ENST00000577681 RRP7AQ9Y3A4 280 aaKnown RBP10.46□□□□□ -0.73
CCL13-202ENST00000577681 TAF1LQ8IZX4 1826 aa10.45□□□□□ -0.74
CCL13-202ENST00000577681 RREB1Q92766 1687 aa10.45□□□□□ -0.74
CCL13-202ENST00000577681 KCPQ6ZWJ8 1503 aa10.45□□□□□ -0.74
CCL13-202ENST00000577681 DCTN1Q14203 1278 aa10.45□□□□□ -0.74
CCL13-202ENST00000577681 CHADLQ6NUI6 762 aa10.45□□□□□ -0.74
CCL13-202ENST00000577681 PTF1AQ7RTS3 328 aa10.45□□□□□ -0.74
CCL13-202ENST00000577681 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
CCL13-202ENST00000577681 ACSBG1Q96GR2 724 aa10.45□□□□□ -0.74
CCL13-202ENST00000577681 SOS1Q07889 1333 aaPredicted RBP10.44□□□□□ -0.74
CCL13-202ENST00000577681 ZBED9Q6R2W3 1325 aa10.44□□□□□ -0.74
CCL13-202ENST00000577681 ZBTB7AO95365 584 aa10.44□□□□□ -0.74
CCL13-202ENST00000577681 GNAI1P63096 354 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms