RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
CDK5RAP3-203ENST00000577442 STK32BQ9NY57 414 aa16.8■□□□□ 0.28
CDK5RAP3-203ENST00000577442 CEMIPQ8WUJ3 1361 aa16.79■□□□□ 0.28
CDK5RAP3-203ENST00000577442 RUNDC1Q96C34 613 aa16.79■□□□□ 0.28
CDK5RAP3-203ENST00000577442 ATG3Q9NT62 314 aa16.79■□□□□ 0.28
CDK5RAP3-203ENST00000577442 ASAP1Q9ULH1 1129 aa16.79■□□□□ 0.28
CDK5RAP3-203ENST00000577442 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
CDK5RAP3-203ENST00000577442 LRRC4BQ9NT99 713 aa16.78■□□□□ 0.28
CDK5RAP3-203ENST00000577442 SIPA1L3O60292 1781 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-203ENST00000577442 C5P01031 1676 aa16.78■□□□□ 0.28
CDK5RAP3-203ENST00000577442 ZNF831Q5JPB2 1677 aa16.78■□□□□ 0.28
CDK5RAP3-203ENST00000577442 TAF1LQ8IZX4 1826 aa16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 LOC102724428A0A0B4J2F2 783 aa16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 SIK1P57059 783 aa16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 LMOD3Q0VAK6 560 aa16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 R3HDM1Q15032 1099 aaKnown RBP16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 IL17REQ8NFR9 667 aa16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 ANO8Q9HCE9 1232 aaPredicted RBP16.77■□□□□ 0.28
CDK5RAP3-203ENST00000577442 CCDC146Q8IYE0 955 aa16.76■□□□□ 0.27
CDK5RAP3-203ENST00000577442 PSDA5PKW4 1024 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-203ENST00000577442 SLC15A2Q16348 729 aa16.75■□□□□ 0.27
CDK5RAP3-203ENST00000577442 CCDC184Q52MB2 194 aa16.75■□□□□ 0.27
CDK5RAP3-203ENST00000577442 TTC5Q8N0Z6 440 aa16.75■□□□□ 0.27
CDK5RAP3-203ENST00000577442 QSER1Q2KHR3 1735 aa16.74■□□□□ 0.27
CDK5RAP3-203ENST00000577442 TMPOP42166 694 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-203ENST00000577442 MCM10Q7L590 875 aa16.74■□□□□ 0.27
CDK5RAP3-203ENST00000577442 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-203ENST00000577442 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-203ENST00000577442 ATP6V1AP38606 617 aa16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 KCNQ4P56696 695 aa16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 RIPK4P57078 832 aa16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 UBR2Q8IWV8 1755 aa16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
CDK5RAP3-203ENST00000577442 PTCD1O75127 700 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-203ENST00000577442 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
CDK5RAP3-203ENST00000577442 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
CDK5RAP3-203ENST00000577442 KCPQ6ZWJ8 1503 aa16.71■□□□□ 0.27
CDK5RAP3-203ENST00000577442 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
CDK5RAP3-203ENST00000577442 DCTN1Q14203 1278 aa16.71■□□□□ 0.27
CDK5RAP3-203ENST00000577442 AK7Q96M32 723 aa16.71■□□□□ 0.27
CDK5RAP3-203ENST00000577442 COL5A3P25940 1745 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 BTBD11A6QL63 1104 aa16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 TAF7Q15545 349 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 DIEXFQ68CQ4 756 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 ZNF790Q6PG37 636 aa16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 TFCP2L1Q9NZI6 479 aa16.7■□□□□ 0.26
CDK5RAP3-203ENST00000577442 CASZ1Q86V15 1759 aa16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 ITPK1Q13572 414 aa16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 VSIG10Q8N0Z9 540 aa16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 LINC00116Q8NCU8 138 aa16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 RRP7AQ9Y3A4 280 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 TJP1Q07157 1748 aa16.69■□□□□ 0.26
CDK5RAP3-203ENST00000577442 UBR3Q6ZT12 1888 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 CCER2I3L3R5 266 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 FLAD1Q8NFF5 587 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 FMNL2Q96PY5 1086 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 SLC4A9Q96Q91 983 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 CNTNAP4Q9C0A0 1308 aa16.68■□□□□ 0.26
CDK5RAP3-203ENST00000577442 APAF1O14727 1248 aa16.67■□□□□ 0.26
CDK5RAP3-203ENST00000577442 HEG1Q9ULI3 1381 aa16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 RC3H1Q5TC82 1133 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 THUMPD2Q9BTF0 503 aaKnown RBP16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 LRP5O75197 1615 aa16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 PNPLA7Q6ZV29 1317 aa16.66■□□□□ 0.26
CDK5RAP3-203ENST00000577442 GNPATO15228 680 aa16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 SSFA2P28290 1259 aa16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 ZNF496Q96IT1 587 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 TEX13AQ9BXU3 409 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 BABAM1Q9NWV8 329 aa16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 MYH14Q7Z406 1995 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-203ENST00000577442 DNAJC10Q8IXB1 793 aa16.64■□□□□ 0.25
CDK5RAP3-203ENST00000577442 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.25
CDK5RAP3-203ENST00000577442 SLC16A10Q8TF71 515 aa16.64■□□□□ 0.25
CDK5RAP3-203ENST00000577442 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
CDK5RAP3-203ENST00000577442 STARD3NLO95772 234 aa16.63■□□□□ 0.25
CDK5RAP3-203ENST00000577442 CRKLP46109 303 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-203ENST00000577442 TSPYL4Q9UJ04 414 aa16.63■□□□□ 0.25
CDK5RAP3-203ENST00000577442 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-203ENST00000577442 SRCAPQ6ZRS2 3230 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 KCNQ3O43525 872 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 ADRA2BP18089 450 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 MTFR1LQ9H019 292 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 SPON1Q9HCB6 807 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 CCDC87Q9NVE4 849 aa16.62■□□□□ 0.25
CDK5RAP3-203ENST00000577442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-203ENST00000577442 MSH5O43196 834 aa16.61■□□□□ 0.25
CDK5RAP3-203ENST00000577442 RPS6KA4O75676 772 aa16.61■□□□□ 0.25
CDK5RAP3-203ENST00000577442 SNRPA1P09661 255 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-203ENST00000577442 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
CDK5RAP3-203ENST00000577442 PHF14O94880 888 aa16.6■□□□□ 0.25
CDK5RAP3-203ENST00000577442 CYP19A1P11511 503 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-203ENST00000577442 CCDC27Q2M243 656 aa16.6■□□□□ 0.25
CDK5RAP3-203ENST00000577442 COL23A1Q86Y22 540 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-203ENST00000577442 NGEFQ8N5V2 710 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms