RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 LOC102724428A0A0B4J2F2 783 aa20.84■□□□□ 0.93
NCBP3-207ENST00000577169 SIK1P57059 783 aa20.84■□□□□ 0.93
NCBP3-207ENST00000577169 ZNF827Q17R98 1081 aa20.84■□□□□ 0.93
NCBP3-207ENST00000577169 RBM42Q9BTD8 480 aaKnown RBP20.83■□□□□ 0.93
NCBP3-207ENST00000577169 ATP6V1AP38606 617 aa20.82■□□□□ 0.92
NCBP3-207ENST00000577169 WDR43Q15061 677 aaKnown RBP eCLIP20.82■□□□□ 0.92
NCBP3-207ENST00000577169 CCDC184Q52MB2 194 aa20.82■□□□□ 0.92
NCBP3-207ENST00000577169 PDGFDQ9GZP0 370 aaPredicted RBP20.82■□□□□ 0.92
NCBP3-207ENST00000577169 PAPPAQ13219 1627 aa20.82■□□□□ 0.92
NCBP3-207ENST00000577169 RTF1Q92541 710 aaKnown RBP20.81■□□□□ 0.92
NCBP3-207ENST00000577169 ADAMTS8Q9UP79 889 aa20.81■□□□□ 0.92
NCBP3-207ENST00000577169 ADAMTS7Q9UKP4 1686 aa20.8■□□□□ 0.92
NCBP3-207ENST00000577169 PTCD1O75127 700 aaKnown RBP20.8■□□□□ 0.92
NCBP3-207ENST00000577169 HMGB2P26583 209 aaKnown RBP20.8■□□□□ 0.92
NCBP3-207ENST00000577169 TEFQ10587 303 aa20.8■□□□□ 0.92
NCBP3-207ENST00000577169 SLC39A6Q13433 755 aa20.8■□□□□ 0.92
NCBP3-207ENST00000577169 ITPK1Q13572 414 aa20.8■□□□□ 0.92
NCBP3-207ENST00000577169 SLC4A9Q96Q91 983 aa20.8■□□□□ 0.92
NCBP3-207ENST00000577169 TFCP2L1Q9NZI6 479 aa20.8■□□□□ 0.92
NCBP3-207ENST00000577169 HTATSF1O43719 755 aaKnown RBP20.79■□□□□ 0.92
NCBP3-207ENST00000577169 DCTN1Q14203 1278 aa20.79■□□□□ 0.92
NCBP3-207ENST00000577169 NFE2L2Q16236 605 aa20.79■□□□□ 0.92
NCBP3-207ENST00000577169 MCM10Q7L590 875 aa20.79■□□□□ 0.92
NCBP3-207ENST00000577169 MAPK8IP3Q9UPT6 1336 aa20.78■□□□□ 0.92
NCBP3-207ENST00000577169 CCDC146Q8IYE0 955 aa20.78■□□□□ 0.92
NCBP3-207ENST00000577169 LINC00116Q8NCU8 138 aa20.78■□□□□ 0.92
NCBP3-207ENST00000577169 TAF1LQ8IZX4 1826 aa20.77■□□□□ 0.92
NCBP3-207ENST00000577169 MRC1P22897 1456 aa20.76■□□□□ 0.91
NCBP3-207ENST00000577169 CEMIPQ8WUJ3 1361 aa20.76■□□□□ 0.91
NCBP3-207ENST00000577169 C5P01031 1676 aa20.76■□□□□ 0.91
NCBP3-207ENST00000577169 RUNDC1Q96C34 613 aa20.75■□□□□ 0.91
NCBP3-207ENST00000577169 PNPLA7Q6ZV29 1317 aa20.75■□□□□ 0.91
NCBP3-207ENST00000577169 DLG5Q8TDM6 1919 aa20.74■□□□□ 0.91
NCBP3-207ENST00000577169 BTBD11A6QL63 1104 aa20.73■□□□□ 0.91
NCBP3-207ENST00000577169 ZBTB7AO95365 584 aa20.73■□□□□ 0.91
NCBP3-207ENST00000577169 TMPOP42166 694 aaKnown RBP20.73■□□□□ 0.91
NCBP3-207ENST00000577169 RIPK4P57078 832 aa20.73■□□□□ 0.91
NCBP3-207ENST00000577169 AK7Q96M32 723 aa20.73■□□□□ 0.91
NCBP3-207ENST00000577169 ATF5Q9Y2D1 282 aaPredicted RBP20.73■□□□□ 0.91
NCBP3-207ENST00000577169 ZNF790Q6PG37 636 aa20.72■□□□□ 0.91
NCBP3-207ENST00000577169 SMIM5Q71RC9 77 aa20.72■□□□□ 0.91
NCBP3-207ENST00000577169 COL23A1Q86Y22 540 aaPredicted RBP20.72■□□□□ 0.91
NCBP3-207ENST00000577169 SPON1Q9HCB6 807 aa20.72■□□□□ 0.91
NCBP3-207ENST00000577169 C4BP0C0L5 1744 aa20.72■□□□□ 0.91
NCBP3-207ENST00000577169 CASZ1Q86V15 1759 aa20.72■□□□□ 0.91
NCBP3-207ENST00000577169 MSH5O43196 834 aa20.71■□□□□ 0.91
NCBP3-207ENST00000577169 KCNQ3O43525 872 aa20.71■□□□□ 0.91
NCBP3-207ENST00000577169 TAF7Q15545 349 aaPredicted RBP20.71■□□□□ 0.91
NCBP3-207ENST00000577169 NEUROD2Q15784 382 aa20.71■□□□□ 0.91
NCBP3-207ENST00000577169 TTC5Q8N0Z6 440 aa20.71■□□□□ 0.91
NCBP3-207ENST00000577169 MRS2Q9HD23 443 aa20.71■□□□□ 0.91
NCBP3-207ENST00000577169 RRP7AQ9Y3A4 280 aaKnown RBP20.71■□□□□ 0.91
NCBP3-207ENST00000577169 SIPA1L3O60292 1781 aaPredicted RBP20.71■□□□□ 0.91
NCBP3-207ENST00000577169 TUBGCP6Q96RT7 1819 aa20.7■□□□□ 0.9
NCBP3-207ENST00000577169 RC3H1Q5TC82 1133 aaKnown RBP20.7■□□□□ 0.9
NCBP3-207ENST00000577169 AMIGO3Q86WK7 504 aa20.7■□□□□ 0.9
NCBP3-207ENST00000577169 DNAJC10Q8IXB1 793 aa20.7■□□□□ 0.9
NCBP3-207ENST00000577169 THUMPD2Q9BTF0 503 aaKnown RBP20.7■□□□□ 0.9
NCBP3-207ENST00000577169 ZNF831Q5JPB2 1677 aa20.7■□□□□ 0.9
NCBP3-207ENST00000577169 FLAD1Q8NFF5 587 aa20.69■□□□□ 0.9
NCBP3-207ENST00000577169 PNISRQ8TF01 805 aaKnown RBP20.69■□□□□ 0.9
NCBP3-207ENST00000577169 SLC16A10Q8TF71 515 aa20.69■□□□□ 0.9
NCBP3-207ENST00000577169 ZNF496Q96IT1 587 aaPredicted RBP20.69■□□□□ 0.9
NCBP3-207ENST00000577169 QSER1Q2KHR3 1735 aa20.69■□□□□ 0.9
NCBP3-207ENST00000577169 GNPATO15228 680 aa20.68■□□□□ 0.9
NCBP3-207ENST00000577169 MTFR1LQ9H019 292 aa20.68■□□□□ 0.9
NCBP3-207ENST00000577169 MIS18AQ9NYP9 233 aa20.68■□□□□ 0.9
NCBP3-207ENST00000577169 PHF14O94880 888 aa20.67■□□□□ 0.9
NCBP3-207ENST00000577169 VSIG10Q8N0Z9 540 aa20.67■□□□□ 0.9
NCBP3-207ENST00000577169 KCPQ6ZWJ8 1503 aa20.67■□□□□ 0.9
NCBP3-207ENST00000577169 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.66■□□□□ 0.9
NCBP3-207ENST00000577169 RPS6KA4O75676 772 aa20.66■□□□□ 0.9
NCBP3-207ENST00000577169 CRKLP46109 303 aaKnown RBP20.66■□□□□ 0.9
NCBP3-207ENST00000577169 FMNL2Q96PY5 1086 aa20.66■□□□□ 0.9
NCBP3-207ENST00000577169 CNTNAP4Q9C0A0 1308 aa20.66■□□□□ 0.9
NCBP3-207ENST00000577169 LRP5O75197 1615 aa20.65■□□□□ 0.9
NCBP3-207ENST00000577169 APAF1O14727 1248 aa20.65■□□□□ 0.9
NCBP3-207ENST00000577169 CYP19A1P11511 503 aaPredicted RBP20.65■□□□□ 0.9
NCBP3-207ENST00000577169 SSFA2P28290 1259 aa20.65■□□□□ 0.9
NCBP3-207ENST00000577169 RTCBQ9Y3I0 505 aaKnown RBP20.65■□□□□ 0.9
NCBP3-207ENST00000577169 UBR3Q6ZT12 1888 aa20.64■□□□□ 0.9
NCBP3-207ENST00000577169 TJP1Q07157 1748 aa20.64■□□□□ 0.9
NCBP3-207ENST00000577169 PTGER2P43116 358 aa20.64■□□□□ 0.89
NCBP3-207ENST00000577169 LMOD3Q0VAK6 560 aa20.64■□□□□ 0.89
NCBP3-207ENST00000577169 INTS5Q6P9B9 1019 aaKnown RBP20.64■□□□□ 0.89
NCBP3-207ENST00000577169 TRIM35Q9UPQ4 493 aa20.64■□□□□ 0.89
NCBP3-207ENST00000577169 UBR2Q8IWV8 1755 aa20.64■□□□□ 0.89
NCBP3-207ENST00000577169 COL5A3P25940 1745 aaPredicted RBP20.64■□□□□ 0.89
NCBP3-207ENST00000577169 MYH14Q7Z406 1995 aaKnown RBP20.63■□□□□ 0.89
NCBP3-207ENST00000577169 HEG1Q9ULI3 1381 aa20.63■□□□□ 0.89
NCBP3-207ENST00000577169 TRAPPC3LQ5T215 181 aa20.63■□□□□ 0.89
NCBP3-207ENST00000577169 SGIP1Q9BQI5 828 aa20.62■□□□□ 0.89
NCBP3-207ENST00000577169 TEX13AQ9BXU3 409 aaPredicted RBP20.62■□□□□ 0.89
NCBP3-207ENST00000577169 CCDC87Q9NVE4 849 aa20.62■□□□□ 0.89
NCBP3-207ENST00000577169 ARHGEF1Q92888 912 aaKnown RBP20.61■□□□□ 0.89
NCBP3-207ENST00000577169 PPP1R1BQ9UD71 204 aaPredicted RBP20.61■□□□□ 0.89
NCBP3-207ENST00000577169 CICQ96RK0 1608 aaPredicted RBP20.6■□□□□ 0.89
NCBP3-207ENST00000577169 STARD3NLO95772 234 aa20.6■□□□□ 0.89
NCBP3-207ENST00000577169 MSL1Q68DK7 614 aa20.6■□□□□ 0.89
NCBP3-207ENST00000577169 USP16Q9Y5T5 823 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms