RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 PKP1Q13835 747 aa21.19■□□□□ 0.98
ATPAF1-214ENST00000576409 PPP4R3BQ5MIZ7 849 aa21.19■□□□□ 0.98
ATPAF1-214ENST00000576409 C17orf53Q8N3J3 647 aaPredicted RBP21.19■□□□□ 0.98
ATPAF1-214ENST00000576409 MTMR7Q9Y216 660 aa21.19■□□□□ 0.98
ATPAF1-214ENST00000576409 TRIM35Q9UPQ4 493 aa21.19■□□□□ 0.98
ATPAF1-214ENST00000576409 PIK3C2GO75747 1445 aa21.19■□□□□ 0.98
ATPAF1-214ENST00000576409 GNAT3A8MTJ3 354 aa21.18■□□□□ 0.98
ATPAF1-214ENST00000576409 NOC3LQ8WTT2 800 aaKnown RBP21.18■□□□□ 0.98
ATPAF1-214ENST00000576409 FOXO3O43524 673 aa21.18■□□□□ 0.98
ATPAF1-214ENST00000576409 FKBP4Q02790 459 aaKnown RBP eCLIP21.18■□□□□ 0.98
ATPAF1-214ENST00000576409 RRP12Q5JTH9 1297 aaKnown RBP21.18■□□□□ 0.98
ATPAF1-214ENST00000576409 TEX35Q5T0J7 233 aa21.18■□□□□ 0.98
ATPAF1-214ENST00000576409 GLRX3O76003 335 aaKnown RBP21.18■□□□□ 0.98
ATPAF1-214ENST00000576409 SERPINC1P01008 464 aa21.18■□□□□ 0.98
ATPAF1-214ENST00000576409 PCMTD1Q96MG8 357 aaPredicted RBP21.18■□□□□ 0.98
ATPAF1-214ENST00000576409 UHRF1BP1Q6BDS2 1440 aa21.17■□□□□ 0.98
ATPAF1-214ENST00000576409 BTBD11A6QL63 1104 aa21.17■□□□□ 0.98
ATPAF1-214ENST00000576409 TSR1Q2NL82 804 aaKnown RBP21.17■□□□□ 0.98
ATPAF1-214ENST00000576409 CHMP4CQ96CF2 233 aa21.17■□□□□ 0.98
ATPAF1-214ENST00000576409 DCTPP1Q9H773 170 aa21.17■□□□□ 0.98
ATPAF1-214ENST00000576409 ARGLU1Q9NWB6 273 aaPredicted RBP21.17■□□□□ 0.98
ATPAF1-214ENST00000576409 IL16Q14005 1332 aa21.17■□□□□ 0.98
ATPAF1-214ENST00000576409 TSC1Q92574 1164 aa21.17■□□□□ 0.98
ATPAF1-214ENST00000576409 USP26Q9BXU7 913 aa21.17■□□□□ 0.98
ATPAF1-214ENST00000576409 CLSTN1O94985 981 aa21.16■□□□□ 0.98
ATPAF1-214ENST00000576409 ZBTB9Q96C00 473 aa21.16■□□□□ 0.98
ATPAF1-214ENST00000576409 TPM1P09493 284 aa21.16■□□□□ 0.98
ATPAF1-214ENST00000576409 RBM25P49756 843 aaKnown RBP21.16■□□□□ 0.98
ATPAF1-214ENST00000576409 PPP6R1Q9UPN7 881 aa21.16■□□□□ 0.98
ATPAF1-214ENST00000576409 ZMYM4Q5VZL5 1548 aa21.16■□□□□ 0.98
ATPAF1-214ENST00000576409 MPRIPQ6WCQ1 1025 aa21.16■□□□□ 0.98
ATPAF1-214ENST00000576409 PI4KAP2A4QPH2 592 aa21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 TNNT1P13805 278 aa21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 PI4KAP1Q8N8J0 262 aa21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 NOLC1Q14978 699 aaKnown RBP eCLIP21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 ZSCAN31Q96LW9 406 aaPredicted RBP21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 ESYT1Q9BSJ8 1104 aa21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 WASLO00401 505 aaPredicted RBP21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 DNM1Q05193 864 aaKnown RBP21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 PLEKHO1Q53GL0 409 aaPredicted RBP21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 ERC1Q8IUD2 1116 aa21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 ARHGAP45Q92619 1136 aa21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 OFD1O75665 1012 aa21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 CCT2P78371 535 aaKnown RBP21.15■□□□□ 0.98
ATPAF1-214ENST00000576409 CD2BP2O95400 341 aaKnown RBP21.14■□□□□ 0.98
ATPAF1-214ENST00000576409 LRRC2Q9BYS8 371 aa21.14■□□□□ 0.98
ATPAF1-214ENST00000576409 ISM2Q6H9L7 571 aa21.14■□□□□ 0.97
ATPAF1-214ENST00000576409 CEP85Q6P2H3 762 aa21.14■□□□□ 0.97
ATPAF1-214ENST00000576409 OLFM4Q6UX06 510 aa21.14■□□□□ 0.97
ATPAF1-214ENST00000576409 BLMP54132 1417 aaPredicted RBP21.14■□□□□ 0.97
ATPAF1-214ENST00000576409 BIN1O00499 593 aa21.14■□□□□ 0.97
ATPAF1-214ENST00000576409 SYCP2Q9BX26 1530 aa21.14■□□□□ 0.97
ATPAF1-214ENST00000576409 HIP1O00291 1037 aa21.13■□□□□ 0.97
ATPAF1-214ENST00000576409 LRRFIP1Q32MZ4 808 aaKnown RBP21.13■□□□□ 0.97
ATPAF1-214ENST00000576409 TRAPPC8Q9Y2L5 1435 aa21.13■□□□□ 0.97
ATPAF1-214ENST00000576409 ANKRD1Q15327 319 aa21.13■□□□□ 0.97
ATPAF1-214ENST00000576409 RAB11FIP4Q86YS3 637 aa21.13■□□□□ 0.97
ATPAF1-214ENST00000576409 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.13■□□□□ 0.97
ATPAF1-214ENST00000576409 V9GYY5 206 aaPredicted RBP21.13■□□□□ 0.97
ATPAF1-214ENST00000576409 ZNF165P49910 485 aa21.12■□□□□ 0.97
ATPAF1-214ENST00000576409 G2E3Q7L622 706 aa21.12■□□□□ 0.97
ATPAF1-214ENST00000576409 CLIP2Q9UDT6 1046 aa21.12■□□□□ 0.97
ATPAF1-214ENST00000576409 GPS2Q13227 327 aa21.12■□□□□ 0.97
ATPAF1-214ENST00000576409 SAFBQ15424 915 aaKnown RBP eCLIP21.12■□□□□ 0.97
ATPAF1-214ENST00000576409 ZNF396Q96N95 335 aaPredicted RBP21.12■□□□□ 0.97
ATPAF1-214ENST00000576409 TMX1Q9H3N1 280 aa21.11■□□□□ 0.97
ATPAF1-214ENST00000576409 FAM173BQ6P4H8 233 aa21.11■□□□□ 0.97
ATPAF1-214ENST00000576409 RAPGEF6Q8TEU7 1601 aa21.11■□□□□ 0.97
ATPAF1-214ENST00000576409 PTPN14Q15678 1187 aa21.11■□□□□ 0.97
ATPAF1-214ENST00000576409 CCDC186Q7Z3E2 898 aa21.11■□□□□ 0.97
ATPAF1-214ENST00000576409 ZC3H6P61129 1189 aaKnown RBP21.11■□□□□ 0.97
ATPAF1-214ENST00000576409 CEP57L1Q8IYX8 460 aa21.11■□□□□ 0.97
ATPAF1-214ENST00000576409 ANKRD36BQ8N2N9 1353 aa21.11■□□□□ 0.97
ATPAF1-214ENST00000576409 RHPN1Q8TCX5 695 aa21.1■□□□□ 0.97
ATPAF1-214ENST00000576409 CFAP45Q9UL16 551 aa21.1■□□□□ 0.97
ATPAF1-214ENST00000576409 LAMC3Q9Y6N6 1575 aa21.1■□□□□ 0.97
ATPAF1-214ENST00000576409 UBE2HP62256 183 aa21.1■□□□□ 0.97
ATPAF1-214ENST00000576409 DNAAF4Q8WXU2 420 aa21.1■□□□□ 0.97
ATPAF1-214ENST00000576409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.1■□□□□ 0.97
ATPAF1-214ENST00000576409 DYNC1I1O14576 645 aa21.09■□□□□ 0.97
ATPAF1-214ENST00000576409 ZSCAN22P10073 491 aaPredicted RBP21.09■□□□□ 0.97
ATPAF1-214ENST00000576409 WDR62O43379 1518 aa21.09■□□□□ 0.97
ATPAF1-214ENST00000576409 ADGRL1O94910 1474 aa21.09■□□□□ 0.97
ATPAF1-214ENST00000576409 MAGI2Q86UL8 1455 aa21.09■□□□□ 0.97
ATPAF1-214ENST00000576409 MARCH6O60337 910 aa21.08■□□□□ 0.97
ATPAF1-214ENST00000576409 CCDC82Q8N4S0 544 aa21.08■□□□□ 0.97
ATPAF1-214ENST00000576409 ANTXR1Q9H6X2 564 aa21.08■□□□□ 0.97
ATPAF1-214ENST00000576409 EVA1CP58658 441 aa21.08■□□□□ 0.97
ATPAF1-214ENST00000576409 CGNQ9P2M7 1197 aaKnown RBP21.08■□□□□ 0.97
ATPAF1-214ENST00000576409 PTPRCP08575 1304 aa21.08■□□□□ 0.96
ATPAF1-214ENST00000576409 IPO7O95373 1038 aaKnown RBP21.08■□□□□ 0.96
ATPAF1-214ENST00000576409 SCAND2PQ9GZW5 306 aaPredicted RBP21.08■□□□□ 0.96
ATPAF1-214ENST00000576409 ZNF521Q96K83 1311 aa21.08■□□□□ 0.96
ATPAF1-214ENST00000576409 PA2G4Q9UQ80 394 aaKnown RBP21.07■□□□□ 0.96
ATPAF1-214ENST00000576409 ARHGEF12Q9NZN5 1544 aa21.07■□□□□ 0.96
ATPAF1-214ENST00000576409 DACT1Q9NYF0 836 aa21.07■□□□□ 0.96
ATPAF1-214ENST00000576409 TMEM63CQ9P1W3 806 aa21.07■□□□□ 0.96
ATPAF1-214ENST00000576409 CFAP100Q494V2 611 aa21.07■□□□□ 0.96
ATPAF1-214ENST00000576409 ECHDC1Q9NTX5 307 aa21.07■□□□□ 0.96
ATPAF1-214ENST00000576409 CTTNBP2Q8WZ74 1663 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms