RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 GNPATO15228 680 aa21.45■■□□□ 1.02
SLC12A4-216ENST00000576377 HMGB2P26583 209 aaKnown RBP21.45■■□□□ 1.02
SLC12A4-216ENST00000576377 TSKSQ9UJT2 592 aa21.45■■□□□ 1.02
SLC12A4-216ENST00000576377 TMEM88BA6NKF7 163 aa21.44■■□□□ 1.02
SLC12A4-216ENST00000576377 LMNB1P20700 586 aa21.44■■□□□ 1.02
SLC12A4-216ENST00000576377 LTBP1Q14766 1721 aa21.43■■□□□ 1.02
SLC12A4-216ENST00000576377 RGPD2P0DJD1 1756 aa21.42■■□□□ 1.02
SLC12A4-216ENST00000576377 CHRNA5P30532 468 aa21.42■■□□□ 1.02
SLC12A4-216ENST00000576377 TTC21AQ8NDW8 1320 aa21.42■■□□□ 1.02
SLC12A4-216ENST00000576377 WDR33Q9C0J8 1336 aaKnown RBP21.42■■□□□ 1.02
SLC12A4-216ENST00000576377 RASSF10A6NK89 507 aa21.41■■□□□ 1.02
SLC12A4-216ENST00000576377 SOX10P56693 466 aa21.41■■□□□ 1.02
SLC12A4-216ENST00000576377 MPRIPQ6WCQ1 1025 aa21.41■■□□□ 1.02
SLC12A4-216ENST00000576377 TMF1P82094 1093 aa21.4■■□□□ 1.02
SLC12A4-216ENST00000576377 DCAF11Q8TEB1 546 aa21.4■■□□□ 1.02
SLC12A4-216ENST00000576377 LTV1Q96GA3 475 aaPredicted RBP21.4■■□□□ 1.02
SLC12A4-216ENST00000576377 ITGB4P16144 1822 aa21.4■■□□□ 1.02
SLC12A4-216ENST00000576377 CASP8AP2Q9UKL3 1982 aa21.39■■□□□ 1.02
SLC12A4-216ENST00000576377 DEFB115Q30KQ5 88 aa21.38■■□□□ 1.01
SLC12A4-216ENST00000576377 NLGN1Q8N2Q7 840 aa21.38■■□□□ 1.01
SLC12A4-216ENST00000576377 PARP3Q9Y6F1 533 aa21.37■■□□□ 1.01
SLC12A4-216ENST00000576377 ITPK1Q13572 414 aa21.36■■□□□ 1.01
SLC12A4-216ENST00000576377 PPARGC1BQ86YN6 1023 aaKnown RBP21.35■■□□□ 1.01
SLC12A4-216ENST00000576377 ITGBL1O95965 494 aaPredicted RBP21.34■■□□□ 1.01
SLC12A4-216ENST00000576377 GYS1P13807 737 aa21.34■■□□□ 1.01
SLC12A4-216ENST00000576377 DGKZQ13574 1117 aa21.34■■□□□ 1.01
SLC12A4-216ENST00000576377 SMARCC1Q92922 1105 aaPredicted RBP21.34■■□□□ 1.01
SLC12A4-216ENST00000576377 USP31Q70CQ4 1352 aa21.33■■□□□ 1
SLC12A4-216ENST00000576377 LOC102724428A0A0B4J2F2 783 aa21.32■■□□□ 1
SLC12A4-216ENST00000576377 SIK1P57059 783 aa21.32■■□□□ 1
SLC12A4-216ENST00000576377 DPY19L2Q6NUT2 758 aa21.32■■□□□ 1
SLC12A4-216ENST00000576377 BEGAINQ9BUH8 593 aa21.32■■□□□ 1
SLC12A4-216ENST00000576377 NFKBIEO00221 500 aa21.31■■□□□ 1
SLC12A4-216ENST00000576377 LDHDQ86WU2 507 aa21.31■■□□□ 1
SLC12A4-216ENST00000576377 ZNF219Q9P2Y4 722 aaPredicted RBP21.31■■□□□ 1
SLC12A4-216ENST00000576377 MON2Q7Z3U7 1717 aa21.31■■□□□ 1
SLC12A4-216ENST00000576377 ZNF692Q9BU19 519 aaPredicted RBP21.3■■□□□ 1
SLC12A4-216ENST00000576377 CENPJQ9HC77 1338 aaPredicted RBP21.29■■□□□ 1
SLC12A4-216ENST00000576377 HABP4Q5JVS0 413 aaKnown RBP21.29■■□□□ 1
SLC12A4-216ENST00000576377 DICER1Q9UPY3 1922 aaKnown RBP21.29■■□□□ 1
SLC12A4-216ENST00000576377 KTN1Q86UP2 1357 aaKnown RBP21.28■■□□□ 1
SLC12A4-216ENST00000576377 TRAPPC3LQ5T215 181 aa21.28■■□□□ 1
SLC12A4-216ENST00000576377 NME9Q86XW9 330 aa21.28■■□□□ 1
SLC12A4-216ENST00000576377 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.28■■□□□ 1
SLC12A4-216ENST00000576377 PIGBQ92521 554 aa21.28■■□□□ 1
SLC12A4-216ENST00000576377 DLL1O00548 723 aa21.27■■□□□ 1
SLC12A4-216ENST00000576377 DDR1Q08345 913 aa21.27■■□□□ 1
SLC12A4-216ENST00000576377 IP6K1Q92551 441 aa21.27■■□□□ 1
SLC12A4-216ENST00000576377 ARHGEF1Q92888 912 aaKnown RBP21.27■■□□□ 1
SLC12A4-216ENST00000576377 ABT1Q9ULW3 272 aaKnown RBP21.27■■□□□ 1
SLC12A4-216ENST00000576377 DDNO94850 711 aaPredicted RBP21.26■□□□□ 0.99
SLC12A4-216ENST00000576377 GCC1Q96CN9 775 aa21.25■□□□□ 0.99
SLC12A4-216ENST00000576377 CAPNS2Q96L46 248 aa21.25■□□□□ 0.99
SLC12A4-216ENST00000576377 ADAMTSL1Q8N6G6 1762 aa21.25■□□□□ 0.99
SLC12A4-216ENST00000576377 DLEC1Q9Y238 1755 aa21.24■□□□□ 0.99
SLC12A4-216ENST00000576377 GRM1Q13255 1194 aa21.24■□□□□ 0.99
SLC12A4-216ENST00000576377 RTCBQ9Y3I0 505 aaKnown RBP21.24■□□□□ 0.99
SLC12A4-216ENST00000576377 CUL9Q8IWT3 2517 aa21.24■□□□□ 0.99
SLC12A4-216ENST00000576377 ATP6V1AP38606 617 aa21.23■□□□□ 0.99
SLC12A4-216ENST00000576377 NBPF1Q3BBV0 1214 aa21.22■□□□□ 0.99
SLC12A4-216ENST00000576377 CYP4F22Q6NT55 531 aa21.22■□□□□ 0.99
SLC12A4-216ENST00000576377 USHBP1Q8N6Y0 703 aa21.22■□□□□ 0.99
SLC12A4-216ENST00000576377 GPR101Q96P66 508 aaPredicted RBP21.22■□□□□ 0.99
SLC12A4-216ENST00000576377 SCN4AP35499 1836 aa21.21■□□□□ 0.99
SLC12A4-216ENST00000576377 ERFEQ4G0M1 354 aa21.21■□□□□ 0.99
SLC12A4-216ENST00000576377 PAXIP1Q6ZW49 1069 aaPredicted RBP21.21■□□□□ 0.99
SLC12A4-216ENST00000576377 TAF1DQ9H5J8 278 aaPredicted RBP21.21■□□□□ 0.99
SLC12A4-216ENST00000576377 PCDH11XQ9BZA7 1347 aa21.21■□□□□ 0.99
SLC12A4-216ENST00000576377 PCDH11YQ9BZA8 1340 aa21.21■□□□□ 0.99
SLC12A4-216ENST00000576377 CD163L1Q9NR16 1453 aa21.2■□□□□ 0.98
SLC12A4-216ENST00000576377 CYP27B1O15528 508 aa21.19■□□□□ 0.98
SLC12A4-216ENST00000576377 AOC2O75106 756 aa21.18■□□□□ 0.98
SLC12A4-216ENST00000576377 RFC4P35249 363 aa21.18■□□□□ 0.98
SLC12A4-216ENST00000576377 EAPPQ56P03 285 aaPredicted RBP21.18■□□□□ 0.98
SLC12A4-216ENST00000576377 ASAP1Q9ULH1 1129 aa21.18■□□□□ 0.98
SLC12A4-216ENST00000576377 A0A0C4DFX4 3053 aa21.18■□□□□ 0.98
SLC12A4-216ENST00000576377 ADRA2BP18089 450 aa21.17■□□□□ 0.98
SLC12A4-216ENST00000576377 FKBP8Q14318 412 aa21.17■□□□□ 0.98
SLC12A4-216ENST00000576377 CGNL1Q0VF96 1302 aa21.17■□□□□ 0.98
SLC12A4-216ENST00000576377 SBNO2Q9Y2G9 1366 aa21.17■□□□□ 0.98
SLC12A4-216ENST00000576377 COL5A3P25940 1745 aaPredicted RBP21.17■□□□□ 0.98
SLC12A4-216ENST00000576377 FXR1P51114 621 aaKnown RBP eCLIP21.16■□□□□ 0.98
SLC12A4-216ENST00000576377 NBPF6Q5VWK0 638 aa21.16■□□□□ 0.98
SLC12A4-216ENST00000576377 MAP1SQ66K74 1059 aaPredicted RBP21.16■□□□□ 0.98
SLC12A4-216ENST00000576377 NBPF4Q96M43 638 aa21.16■□□□□ 0.98
SLC12A4-216ENST00000576377 STAC3Q96MF2 364 aa21.16■□□□□ 0.98
SLC12A4-216ENST00000576377 SRP68Q9UHB9 627 aaKnown RBP21.16■□□□□ 0.98
SLC12A4-216ENST00000576377 FER1L6Q2WGJ9 1857 aa21.15■□□□□ 0.98
SLC12A4-216ENST00000576377 IQCA1LA6NCM1 817 aa21.15■□□□□ 0.98
SLC12A4-216ENST00000576377 ECE1P42892 770 aa21.15■□□□□ 0.98
SLC12A4-216ENST00000576377 CLEC11AQ9Y240 323 aa21.15■□□□□ 0.98
SLC12A4-216ENST00000576377 ADAMTS7Q9UKP4 1686 aa21.15■□□□□ 0.98
SLC12A4-216ENST00000576377 KDRP35968 1356 aa21.14■□□□□ 0.98
SLC12A4-216ENST00000576377 SZT2Q5T011 3432 aa21.14■□□□□ 0.97
SLC12A4-216ENST00000576377 HOXC9P31274 260 aa21.14■□□□□ 0.97
SLC12A4-216ENST00000576377 CNTROBQ8N137 903 aa21.14■□□□□ 0.97
SLC12A4-216ENST00000576377 RAPGEF4Q8WZA2 1011 aa21.14■□□□□ 0.97
SLC12A4-216ENST00000576377 MYH14Q7Z406 1995 aaKnown RBP21.14■□□□□ 0.97
SLC12A4-216ENST00000576377 EVC2Q86UK5 1308 aa21.13■□□□□ 0.97
SLC12A4-216ENST00000576377 POLRMTO00411 1230 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms