RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-215ENST00000575857 NFE2L2Q16236 605 aa14.37□□□□□ -0.11
SLC12A4-215ENST00000575857 ZNF827Q17R98 1081 aa14.37□□□□□ -0.11
SLC12A4-215ENST00000575857 ITGB4P16144 1822 aa14.36□□□□□ -0.11
SLC12A4-215ENST00000575857 CEMIPQ8WUJ3 1361 aa14.36□□□□□ -0.11
SLC12A4-215ENST00000575857 CCDC146Q8IYE0 955 aa14.36□□□□□ -0.11
SLC12A4-215ENST00000575857 RUNDC1Q96C34 613 aa14.36□□□□□ -0.11
SLC12A4-215ENST00000575857 SGIP1Q9BQI5 828 aa14.36□□□□□ -0.11
SLC12A4-215ENST00000575857 LRRC4BQ9NT99 713 aa14.36□□□□□ -0.11
SLC12A4-215ENST00000575857 TMOD3Q9NYL9 352 aa14.36□□□□□ -0.11
SLC12A4-215ENST00000575857 SCN11AQ9UI33 1791 aa14.36□□□□□ -0.11
SLC12A4-215ENST00000575857 UTRNP46939 3433 aa14.36□□□□□ -0.11
SLC12A4-215ENST00000575857 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
SLC12A4-215ENST00000575857 HTATSF1O43719 755 aaKnown RBP14.35□□□□□ -0.11
SLC12A4-215ENST00000575857 SYT17Q9BSW7 474 aa14.35□□□□□ -0.11
SLC12A4-215ENST00000575857 MAPK8IP3Q9UPT6 1336 aa14.35□□□□□ -0.11
SLC12A4-215ENST00000575857 KAT6BQ8WYB5 2073 aa14.34□□□□□ -0.11
SLC12A4-215ENST00000575857 CCER2I3L3R5 266 aa14.34□□□□□ -0.11
SLC12A4-215ENST00000575857 NEFMP07197 916 aa14.34□□□□□ -0.11
SLC12A4-215ENST00000575857 TMPOP42166 694 aaKnown RBP14.34□□□□□ -0.11
SLC12A4-215ENST00000575857 KCNQ4P56696 695 aa14.34□□□□□ -0.11
SLC12A4-215ENST00000575857 CABP4P57796 275 aa14.34□□□□□ -0.11
SLC12A4-215ENST00000575857 NFATC2IPQ8NCF5 419 aa14.34□□□□□ -0.11
SLC12A4-215ENST00000575857 SLC52A2Q9HAB3 445 aa14.34□□□□□ -0.11
SLC12A4-215ENST00000575857 MIER1Q8N108 512 aa14.33□□□□□ -0.12
SLC12A4-215ENST00000575857 MTFR1LQ9H019 292 aa14.33□□□□□ -0.12
SLC12A4-215ENST00000575857 ATG3Q9NT62 314 aa14.33□□□□□ -0.12
SLC12A4-215ENST00000575857 ASAP1Q9ULH1 1129 aa14.33□□□□□ -0.12
SLC12A4-215ENST00000575857 DCTN1Q14203 1278 aa14.32□□□□□ -0.12
SLC12A4-215ENST00000575857 MCM10Q7L590 875 aa14.32□□□□□ -0.12
SLC12A4-215ENST00000575857 ZNF784Q8NCA9 323 aaPredicted RBP14.32□□□□□ -0.12
SLC12A4-215ENST00000575857 PAPPAQ13219 1627 aa14.32□□□□□ -0.12
SLC12A4-215ENST00000575857 PALLDQ8WX93 1383 aa14.32□□□□□ -0.12
SLC12A4-215ENST00000575857 SMARCC1Q92922 1105 aaPredicted RBP14.31□□□□□ -0.12
SLC12A4-215ENST00000575857 LY75O60449 1722 aa14.31□□□□□ -0.12
SLC12A4-215ENST00000575857 APAF1O14727 1248 aa14.3□□□□□ -0.12
SLC12A4-215ENST00000575857 RIPK4P57078 832 aa14.3□□□□□ -0.12
SLC12A4-215ENST00000575857 SLC27A3Q5K4L6 730 aa14.3□□□□□ -0.12
SLC12A4-215ENST00000575857 RTF1Q92541 710 aaKnown RBP14.3□□□□□ -0.12
SLC12A4-215ENST00000575857 ARXQ96QS3 562 aa14.3□□□□□ -0.12
SLC12A4-215ENST00000575857 TRIM35Q9UPQ4 493 aa14.3□□□□□ -0.12
SLC12A4-215ENST00000575857 RRP7AQ9Y3A4 280 aaKnown RBP14.3□□□□□ -0.12
SLC12A4-215ENST00000575857 SIPA1L3O60292 1781 aaPredicted RBP14.29□□□□□ -0.12
SLC12A4-215ENST00000575857 VIRMAQ69YN4 1812 aaKnown RBP14.29□□□□□ -0.12
SLC12A4-215ENST00000575857 DLG5Q8TDM6 1919 aa14.29□□□□□ -0.12
SLC12A4-215ENST00000575857 SLC4A9Q96Q91 983 aa14.29□□□□□ -0.12
SLC12A4-215ENST00000575857 LOC102724428A0A0B4J2F2 783 aa14.28□□□□□ -0.12
SLC12A4-215ENST00000575857 SIK1P57059 783 aa14.28□□□□□ -0.12
SLC12A4-215ENST00000575857 TEFQ10587 303 aa14.28□□□□□ -0.12
SLC12A4-215ENST00000575857 AKT1S1Q96B36 256 aa14.28□□□□□ -0.12
SLC12A4-215ENST00000575857 THUMPD2Q9BTF0 503 aaKnown RBP14.28□□□□□ -0.12
SLC12A4-215ENST00000575857 KCPQ6ZWJ8 1503 aa14.27□□□□□ -0.12
SLC12A4-215ENST00000575857 SLC39A6Q13433 755 aa14.27□□□□□ -0.13
SLC12A4-215ENST00000575857 FAM9BQ8IZU0 186 aa14.27□□□□□ -0.13
SLC12A4-215ENST00000575857 KLHL34Q8N239 644 aa14.27□□□□□ -0.13
SLC12A4-215ENST00000575857 CCNL1Q9UK58 526 aaPredicted RBP14.27□□□□□ -0.13
SLC12A4-215ENST00000575857 PNPLA7Q6ZV29 1317 aa14.26□□□□□ -0.13
SLC12A4-215ENST00000575857 LMOD3Q0VAK6 560 aa14.26□□□□□ -0.13
SLC12A4-215ENST00000575857 ITPK1Q13572 414 aa14.26□□□□□ -0.13
SLC12A4-215ENST00000575857 NEUROD2Q15784 382 aa14.26□□□□□ -0.13
SLC12A4-215ENST00000575857 KCNQ3O43525 872 aa14.25□□□□□ -0.13
SLC12A4-215ENST00000575857 TAF7Q15545 349 aaPredicted RBP14.25□□□□□ -0.13
SLC12A4-215ENST00000575857 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
SLC12A4-215ENST00000575857 ZNF831Q5JPB2 1677 aa14.24□□□□□ -0.13
SLC12A4-215ENST00000575857 BTBD11A6QL63 1104 aa14.24□□□□□ -0.13
SLC12A4-215ENST00000575857 ZNF790Q6PG37 636 aa14.24□□□□□ -0.13
SLC12A4-215ENST00000575857 NLGN2Q8NFZ4 835 aa14.24□□□□□ -0.13
SLC12A4-215ENST00000575857 UBR2Q8IWV8 1755 aa14.24□□□□□ -0.13
SLC12A4-215ENST00000575857 GOLGB1Q14789 3259 aaKnown RBP14.23□□□□□ -0.13
SLC12A4-215ENST00000575857 CICQ96RK0 1608 aaPredicted RBP14.23□□□□□ -0.13
SLC12A4-215ENST00000575857 PTCD1O75127 700 aaKnown RBP14.23□□□□□ -0.13
SLC12A4-215ENST00000575857 ATP6V1AP38606 617 aa14.23□□□□□ -0.13
SLC12A4-215ENST00000575857 CCDC27Q2M243 656 aa14.23□□□□□ -0.13
SLC12A4-215ENST00000575857 LINC00116Q8NCU8 138 aa14.23□□□□□ -0.13
SLC12A4-215ENST00000575857 RBM42Q9BTD8 480 aaKnown RBP14.23□□□□□ -0.13
SLC12A4-215ENST00000575857 GPR162Q16538 588 aa14.22□□□□□ -0.13
SLC12A4-215ENST00000575857 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
SLC12A4-215ENST00000575857 ZNF496Q96IT1 587 aaPredicted RBP14.22□□□□□ -0.13
SLC12A4-215ENST00000575857 MIS18AQ9NYP9 233 aa14.22□□□□□ -0.13
SLC12A4-215ENST00000575857 TFCP2L1Q9NZI6 479 aa14.22□□□□□ -0.13
SLC12A4-215ENST00000575857 SENP3-EIF4A1A0A087X0R7 540 aa14.21□□□□□ -0.13
SLC12A4-215ENST00000575857 TTC5Q8N0Z6 440 aa14.21□□□□□ -0.13
SLC12A4-215ENST00000575857 VSIG10Q8N0Z9 540 aa14.21□□□□□ -0.13
SLC12A4-215ENST00000575857 BABAM1Q9NWV8 329 aa14.21□□□□□ -0.13
SLC12A4-215ENST00000575857 TJP1Q07157 1748 aa14.21□□□□□ -0.14
SLC12A4-215ENST00000575857 HEG1Q9ULI3 1381 aa14.21□□□□□ -0.14
SLC12A4-215ENST00000575857 C5P01031 1676 aa14.2□□□□□ -0.14
SLC12A4-215ENST00000575857 TAF1LQ8IZX4 1826 aa14.2□□□□□ -0.14
SLC12A4-215ENST00000575857 CHL1O00533 1208 aa14.2□□□□□ -0.14
SLC12A4-215ENST00000575857 ZNF853P0CG23 659 aa14.2□□□□□ -0.14
SLC12A4-215ENST00000575857 MSL1Q68DK7 614 aa14.2□□□□□ -0.14
SLC12A4-215ENST00000575857 WWC1Q8IX03 1113 aa14.2□□□□□ -0.14
SLC12A4-215ENST00000575857 KDM3BQ7LBC6 1761 aa14.19□□□□□ -0.14
SLC12A4-215ENST00000575857 C4BP0C0L5 1744 aa14.19□□□□□ -0.14
SLC12A4-215ENST00000575857 AMIGO3Q86WK7 504 aa14.19□□□□□ -0.14
SLC12A4-215ENST00000575857 DNAJC10Q8IXB1 793 aa14.19□□□□□ -0.14
SLC12A4-215ENST00000575857 FMNL2Q96PY5 1086 aa14.19□□□□□ -0.14
SLC12A4-215ENST00000575857 COL5A3P25940 1745 aaPredicted RBP14.18□□□□□ -0.14
SLC12A4-215ENST00000575857 CNTNAP4Q9C0A0 1308 aa14.18□□□□□ -0.14
SLC12A4-215ENST00000575857 CYP19A1P11511 503 aaPredicted RBP14.18□□□□□ -0.14
SLC12A4-215ENST00000575857 HMGB2P26583 209 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms