RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 MTHFSDQ2M296 383 aaKnown RBP17.74■□□□□ 0.43
RPAIN-216ENST00000575599 LRP5O75197 1615 aa17.73■□□□□ 0.43
RPAIN-216ENST00000575599 ERVV-2B6SEH9 535 aa17.73■□□□□ 0.43
RPAIN-216ENST00000575599 ZNF827Q17R98 1081 aa17.73■□□□□ 0.43
RPAIN-216ENST00000575599 AKAP4Q5JQC9 854 aa17.73■□□□□ 0.43
RPAIN-216ENST00000575599 SMARCC1Q92922 1105 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-216ENST00000575599 SRCAPQ6ZRS2 3230 aa17.72■□□□□ 0.43
RPAIN-216ENST00000575599 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
RPAIN-216ENST00000575599 CABP4P57796 275 aa17.72■□□□□ 0.43
RPAIN-216ENST00000575599 SCN11AQ9UI33 1791 aa17.72■□□□□ 0.43
RPAIN-216ENST00000575599 PDGFDQ9GZP0 370 aaPredicted RBP17.71■□□□□ 0.43
RPAIN-216ENST00000575599 RSPH6AQ9H0K4 717 aa17.71■□□□□ 0.43
RPAIN-216ENST00000575599 ASAP1Q9ULH1 1129 aa17.71■□□□□ 0.43
RPAIN-216ENST00000575599 CASZ1Q86V15 1759 aa17.71■□□□□ 0.43
RPAIN-216ENST00000575599 C5P01031 1676 aa17.71■□□□□ 0.43
RPAIN-216ENST00000575599 VIRMAQ69YN4 1812 aaKnown RBP17.7■□□□□ 0.42
RPAIN-216ENST00000575599 MYBBP1AQ9BQG0 1328 aaKnown RBP17.69■□□□□ 0.42
RPAIN-216ENST00000575599 SAMD1Q6SPF0 538 aaPredicted RBP17.69■□□□□ 0.42
RPAIN-216ENST00000575599 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
RPAIN-216ENST00000575599 ATG3Q9NT62 314 aa17.69■□□□□ 0.42
RPAIN-216ENST00000575599 GAS2L2Q8NHY3 880 aa17.68■□□□□ 0.42
RPAIN-216ENST00000575599 LGR6Q9HBX8 967 aa17.68■□□□□ 0.42
RPAIN-216ENST00000575599 TAF1LQ8IZX4 1826 aa17.68■□□□□ 0.42
RPAIN-216ENST00000575599 TUBGCP6Q96RT7 1819 aa17.68■□□□□ 0.42
RPAIN-216ENST00000575599 LOC102724428A0A0B4J2F2 783 aa17.67■□□□□ 0.42
RPAIN-216ENST00000575599 RNMTO43148 476 aaKnown RBP17.67■□□□□ 0.42
RPAIN-216ENST00000575599 SIK1P57059 783 aa17.67■□□□□ 0.42
RPAIN-216ENST00000575599 NFATC2IPQ8NCF5 419 aa17.67■□□□□ 0.42
RPAIN-216ENST00000575599 PHACTR3Q96KR7 559 aa17.67■□□□□ 0.42
RPAIN-216ENST00000575599 TFCP2L1Q9NZI6 479 aa17.67■□□□□ 0.42
RPAIN-216ENST00000575599 MAP3K5Q99683 1374 aa17.67■□□□□ 0.42
RPAIN-216ENST00000575599 FCHSD2O94868 740 aa17.66■□□□□ 0.42
RPAIN-216ENST00000575599 ZBTB7AO95365 584 aa17.66■□□□□ 0.42
RPAIN-216ENST00000575599 MRC1P22897 1456 aa17.66■□□□□ 0.42
RPAIN-216ENST00000575599 QSER1Q2KHR3 1735 aa17.66■□□□□ 0.42
RPAIN-216ENST00000575599 ADAMTS7Q9UKP4 1686 aa17.65■□□□□ 0.42
RPAIN-216ENST00000575599 C4BP0C0L5 1744 aa17.65■□□□□ 0.42
RPAIN-216ENST00000575599 GNAT3A8MTJ3 354 aa17.65■□□□□ 0.42
RPAIN-216ENST00000575599 ATP6V1AP38606 617 aa17.65■□□□□ 0.42
RPAIN-216ENST00000575599 PRKRIP1Q9H875 184 aaPredicted RBP17.65■□□□□ 0.42
RPAIN-216ENST00000575599 SLC52A2Q9HAB3 445 aa17.65■□□□□ 0.42
RPAIN-216ENST00000575599 SPON1Q9HCB6 807 aa17.65■□□□□ 0.42
RPAIN-216ENST00000575599 PNPLA7Q6ZV29 1317 aa17.64■□□□□ 0.41
RPAIN-216ENST00000575599 ITPK1Q13572 414 aa17.63■□□□□ 0.41
RPAIN-216ENST00000575599 LINC00116Q8NCU8 138 aa17.63■□□□□ 0.41
RPAIN-216ENST00000575599 AK7Q96M32 723 aa17.63■□□□□ 0.41
RPAIN-216ENST00000575599 ATF5Q9Y2D1 282 aaPredicted RBP17.63■□□□□ 0.41
RPAIN-216ENST00000575599 PTCD1O75127 700 aaKnown RBP17.62■□□□□ 0.41
RPAIN-216ENST00000575599 NEFMP07197 916 aa17.62■□□□□ 0.41
RPAIN-216ENST00000575599 HMGB2P26583 209 aaKnown RBP17.62■□□□□ 0.41
RPAIN-216ENST00000575599 MTFR1LQ9H019 292 aa17.61■□□□□ 0.41
RPAIN-216ENST00000575599 TEFQ10587 303 aa17.6■□□□□ 0.41
RPAIN-216ENST00000575599 SLC39A6Q13433 755 aa17.6■□□□□ 0.41
RPAIN-216ENST00000575599 IL17REQ8NFR9 667 aa17.6■□□□□ 0.41
RPAIN-216ENST00000575599 SLC4A9Q96Q91 983 aa17.6■□□□□ 0.41
RPAIN-216ENST00000575599 PPP1R1BQ9UD71 204 aaPredicted RBP17.6■□□□□ 0.41
RPAIN-216ENST00000575599 PHF14O94880 888 aa17.59■□□□□ 0.41
RPAIN-216ENST00000575599 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
RPAIN-216ENST00000575599 ZNF831Q5JPB2 1677 aa17.59■□□□□ 0.41
RPAIN-216ENST00000575599 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
RPAIN-216ENST00000575599 COL23A1Q86Y22 540 aaPredicted RBP17.58■□□□□ 0.4
RPAIN-216ENST00000575599 COL5A3P25940 1745 aaPredicted RBP17.58■□□□□ 0.4
RPAIN-216ENST00000575599 UBR3Q6ZT12 1888 aa17.58■□□□□ 0.4
RPAIN-216ENST00000575599 TJP1Q07157 1748 aa17.57■□□□□ 0.4
RPAIN-216ENST00000575599 GNPATO15228 680 aa17.57■□□□□ 0.4
RPAIN-216ENST00000575599 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
RPAIN-216ENST00000575599 SMIM5Q71RC9 77 aa17.57■□□□□ 0.4
RPAIN-216ENST00000575599 PLEKHF1Q96S99 279 aa17.57■□□□□ 0.4
RPAIN-216ENST00000575599 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
RPAIN-216ENST00000575599 SIPA1L3O60292 1781 aaPredicted RBP17.57■□□□□ 0.4
RPAIN-216ENST00000575599 CEMIPQ8WUJ3 1361 aa17.57■□□□□ 0.4
RPAIN-216ENST00000575599 PTGER2P43116 358 aa17.56■□□□□ 0.4
RPAIN-216ENST00000575599 WDR43Q15061 677 aaKnown RBP eCLIP17.56■□□□□ 0.4
RPAIN-216ENST00000575599 MCM10Q7L590 875 aa17.56■□□□□ 0.4
RPAIN-216ENST00000575599 AMIGO3Q86WK7 504 aa17.56■□□□□ 0.4
RPAIN-216ENST00000575599 KCPQ6ZWJ8 1503 aa17.56■□□□□ 0.4
RPAIN-216ENST00000575599 DCTN1Q14203 1278 aa17.55■□□□□ 0.4
RPAIN-216ENST00000575599 TTC5Q8N0Z6 440 aa17.55■□□□□ 0.4
RPAIN-216ENST00000575599 SLC16A10Q8TF71 515 aa17.55■□□□□ 0.4
RPAIN-216ENST00000575599 DLG5Q8TDM6 1919 aa17.55■□□□□ 0.4
RPAIN-216ENST00000575599 UBR2Q8IWV8 1755 aa17.54■□□□□ 0.4
RPAIN-216ENST00000575599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.54■□□□□ 0.4
RPAIN-216ENST00000575599 FLAD1Q8NFF5 587 aa17.54■□□□□ 0.4
RPAIN-216ENST00000575599 CICQ96RK0 1608 aaPredicted RBP17.54■□□□□ 0.4
RPAIN-216ENST00000575599 SSFA2P28290 1259 aa17.53■□□□□ 0.4
RPAIN-216ENST00000575599 NFE2L2Q16236 605 aa17.53■□□□□ 0.4
RPAIN-216ENST00000575599 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
RPAIN-216ENST00000575599 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
RPAIN-216ENST00000575599 CNTNAP4Q9C0A0 1308 aa17.53■□□□□ 0.4
RPAIN-216ENST00000575599 BTBD11A6QL63 1104 aa17.53■□□□□ 0.4
RPAIN-216ENST00000575599 DNAJC10Q8IXB1 793 aa17.53■□□□□ 0.4
RPAIN-216ENST00000575599 ANP32CO43423 234 aa17.52■□□□□ 0.39
RPAIN-216ENST00000575599 HTATSF1O43719 755 aaKnown RBP17.52■□□□□ 0.39
RPAIN-216ENST00000575599 CRKLP46109 303 aaKnown RBP17.52■□□□□ 0.39
RPAIN-216ENST00000575599 ZNF790Q6PG37 636 aa17.52■□□□□ 0.39
RPAIN-216ENST00000575599 SGIP1Q9BQI5 828 aa17.52■□□□□ 0.39
RPAIN-216ENST00000575599 RTCBQ9Y3I0 505 aaKnown RBP17.52■□□□□ 0.39
RPAIN-216ENST00000575599 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
RPAIN-216ENST00000575599 POLD1P28340 1107 aa17.51■□□□□ 0.39
RPAIN-216ENST00000575599 RC3H1Q5TC82 1133 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms