RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
LITAF-217ENST00000575426 TAF1LQ8IZX4 1826 aa20.09■□□□□ 0.81
LITAF-217ENST00000575426 PSDA5PKW4 1024 aaPredicted RBP20.09■□□□□ 0.81
LITAF-217ENST00000575426 HTATSF1O43719 755 aaKnown RBP20.09■□□□□ 0.81
LITAF-217ENST00000575426 R3HDM1Q15032 1099 aaKnown RBP20.09■□□□□ 0.81
LITAF-217ENST00000575426 NFE2L2Q16236 605 aa20.09■□□□□ 0.81
LITAF-217ENST00000575426 IL17REQ8NFR9 667 aa20.09■□□□□ 0.81
LITAF-217ENST00000575426 RUNDC1Q96C34 613 aa20.09■□□□□ 0.81
LITAF-217ENST00000575426 LRRC4BQ9NT99 713 aa20.09■□□□□ 0.81
LITAF-217ENST00000575426 CCDC146Q8IYE0 955 aa20.08■□□□□ 0.81
LITAF-217ENST00000575426 RBM42Q9BTD8 480 aaKnown RBP20.08■□□□□ 0.81
LITAF-217ENST00000575426 LOC102724428A0A0B4J2F2 783 aa20.07■□□□□ 0.8
LITAF-217ENST00000575426 KCNQ4P56696 695 aa20.07■□□□□ 0.8
LITAF-217ENST00000575426 SIK1P57059 783 aa20.07■□□□□ 0.8
LITAF-217ENST00000575426 CCDC184Q52MB2 194 aa20.07■□□□□ 0.8
LITAF-217ENST00000575426 C5P01031 1676 aa20.07■□□□□ 0.8
LITAF-217ENST00000575426 MRC1P22897 1456 aa20.06■□□□□ 0.8
LITAF-217ENST00000575426 SIPA1L3O60292 1781 aaPredicted RBP20.06■□□□□ 0.8
LITAF-217ENST00000575426 ATP6V1AP38606 617 aa20.05■□□□□ 0.8
LITAF-217ENST00000575426 SLC15A2Q16348 729 aa20.05■□□□□ 0.8
LITAF-217ENST00000575426 MCM10Q7L590 875 aa20.05■□□□□ 0.8
LITAF-217ENST00000575426 RIPK4P57078 832 aa20.04■□□□□ 0.8
LITAF-217ENST00000575426 ANO8Q9HCE9 1232 aaPredicted RBP20.04■□□□□ 0.8
LITAF-217ENST00000575426 PAPPAQ13219 1627 aa20.04■□□□□ 0.8
LITAF-217ENST00000575426 PTCD1O75127 700 aaKnown RBP20.03■□□□□ 0.8
LITAF-217ENST00000575426 TMPOP42166 694 aaKnown RBP20.03■□□□□ 0.8
LITAF-217ENST00000575426 LMOD3Q0VAK6 560 aa20.03■□□□□ 0.8
LITAF-217ENST00000575426 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
LITAF-217ENST00000575426 TTC5Q8N0Z6 440 aa20.03■□□□□ 0.8
LITAF-217ENST00000575426 CEMIPQ8WUJ3 1361 aa20.03■□□□□ 0.8
LITAF-217ENST00000575426 ZNF831Q5JPB2 1677 aa20.03■□□□□ 0.8
LITAF-217ENST00000575426 SLC39A6Q13433 755 aa20.02■□□□□ 0.8
LITAF-217ENST00000575426 NEUROD2Q15784 382 aa20.02■□□□□ 0.8
LITAF-217ENST00000575426 BTBD11A6QL63 1104 aa20.01■□□□□ 0.79
LITAF-217ENST00000575426 DIEXFQ68CQ4 756 aaKnown RBP20.01■□□□□ 0.79
LITAF-217ENST00000575426 PNISRQ8TF01 805 aaKnown RBP20.01■□□□□ 0.79
LITAF-217ENST00000575426 TFCP2L1Q9NZI6 479 aa20.01■□□□□ 0.79
LITAF-217ENST00000575426 QSER1Q2KHR3 1735 aa20.01■□□□□ 0.79
LITAF-217ENST00000575426 C4BP0C0L5 1744 aa20■□□□□ 0.79
LITAF-217ENST00000575426 AKT1S1Q96B36 256 aa20■□□□□ 0.79
LITAF-217ENST00000575426 RRP7AQ9Y3A4 280 aaKnown RBP20■□□□□ 0.79
LITAF-217ENST00000575426 TAF7Q15545 349 aaPredicted RBP19.99■□□□□ 0.79
LITAF-217ENST00000575426 ZNF827Q17R98 1081 aa19.99■□□□□ 0.79
LITAF-217ENST00000575426 AK7Q96M32 723 aa19.99■□□□□ 0.79
LITAF-217ENST00000575426 TUBGCP6Q96RT7 1819 aa19.99■□□□□ 0.79
LITAF-217ENST00000575426 UBR2Q8IWV8 1755 aa19.98■□□□□ 0.79
LITAF-217ENST00000575426 ZNF790Q6PG37 636 aa19.98■□□□□ 0.79
LITAF-217ENST00000575426 ITPK1Q13572 414 aa19.97■□□□□ 0.79
LITAF-217ENST00000575426 COL5A3P25940 1745 aaPredicted RBP19.96■□□□□ 0.79
LITAF-217ENST00000575426 APAF1O14727 1248 aa19.96■□□□□ 0.79
LITAF-217ENST00000575426 FAM9BQ8IZU0 186 aa19.96■□□□□ 0.79
LITAF-217ENST00000575426 LINC00116Q8NCU8 138 aa19.96■□□□□ 0.79
LITAF-217ENST00000575426 SLC4A9Q96Q91 983 aa19.96■□□□□ 0.79
LITAF-217ENST00000575426 MSH5O43196 834 aa19.95■□□□□ 0.78
LITAF-217ENST00000575426 FLAD1Q8NFF5 587 aa19.95■□□□□ 0.78
LITAF-217ENST00000575426 FMNL2Q96PY5 1086 aa19.95■□□□□ 0.78
LITAF-217ENST00000575426 THUMPD2Q9BTF0 503 aaKnown RBP19.95■□□□□ 0.78
LITAF-217ENST00000575426 TJP1Q07157 1748 aa19.95■□□□□ 0.78
LITAF-217ENST00000575426 UBR3Q6ZT12 1888 aa19.94■□□□□ 0.78
LITAF-217ENST00000575426 CASZ1Q86V15 1759 aa19.94■□□□□ 0.78
LITAF-217ENST00000575426 KCPQ6ZWJ8 1503 aa19.94■□□□□ 0.78
LITAF-217ENST00000575426 VSIG10Q8N0Z9 540 aa19.94■□□□□ 0.78
LITAF-217ENST00000575426 RC3H1Q5TC82 1133 aaKnown RBP19.93■□□□□ 0.78
LITAF-217ENST00000575426 TEX13AQ9BXU3 409 aaPredicted RBP19.93■□□□□ 0.78
LITAF-217ENST00000575426 CICQ96RK0 1608 aaPredicted RBP19.93■□□□□ 0.78
LITAF-217ENST00000575426 MYH14Q7Z406 1995 aaKnown RBP19.92■□□□□ 0.78
LITAF-217ENST00000575426 CCER2I3L3R5 266 aa19.92■□□□□ 0.78
LITAF-217ENST00000575426 DNAJC10Q8IXB1 793 aa19.92■□□□□ 0.78
LITAF-217ENST00000575426 ZNF496Q96IT1 587 aaPredicted RBP19.92■□□□□ 0.78
LITAF-217ENST00000575426 KDM3BQ7LBC6 1761 aa19.91■□□□□ 0.78
LITAF-217ENST00000575426 GNPATO15228 680 aa19.91■□□□□ 0.78
LITAF-217ENST00000575426 KCNQ3O43525 872 aa19.91■□□□□ 0.78
LITAF-217ENST00000575426 MIS18AQ9NYP9 233 aa19.91■□□□□ 0.78
LITAF-217ENST00000575426 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
LITAF-217ENST00000575426 RTCBQ9Y3I0 505 aaKnown RBP19.91■□□□□ 0.78
LITAF-217ENST00000575426 PNPLA7Q6ZV29 1317 aa19.91■□□□□ 0.78
LITAF-217ENST00000575426 CNTNAP4Q9C0A0 1308 aa19.91■□□□□ 0.78
LITAF-217ENST00000575426 HEG1Q9ULI3 1381 aa19.91■□□□□ 0.78
LITAF-217ENST00000575426 PHF14O94880 888 aa19.9■□□□□ 0.78
LITAF-217ENST00000575426 STARD3NLO95772 234 aa19.9■□□□□ 0.78
LITAF-217ENST00000575426 SLC16A10Q8TF71 515 aa19.9■□□□□ 0.78
LITAF-217ENST00000575426 PDGFDQ9GZP0 370 aaPredicted RBP19.9■□□□□ 0.78
LITAF-217ENST00000575426 SPON1Q9HCB6 807 aa19.9■□□□□ 0.78
LITAF-217ENST00000575426 SSFA2P28290 1259 aa19.89■□□□□ 0.77
LITAF-217ENST00000575426 CRKLP46109 303 aaKnown RBP19.89■□□□□ 0.77
LITAF-217ENST00000575426 CALD1Q05682 793 aaKnown RBP19.89■□□□□ 0.77
LITAF-217ENST00000575426 BABAM1Q9NWV8 329 aa19.89■□□□□ 0.77
LITAF-217ENST00000575426 TSPYL4Q9UJ04 414 aa19.89■□□□□ 0.77
LITAF-217ENST00000575426 LAS1LQ9Y4W2 734 aaKnown RBP19.89■□□□□ 0.77
LITAF-217ENST00000575426 ZBTB7AO95365 584 aa19.88■□□□□ 0.77
LITAF-217ENST00000575426 COL23A1Q86Y22 540 aaPredicted RBP19.88■□□□□ 0.77
LITAF-217ENST00000575426 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.87■□□□□ 0.77
LITAF-217ENST00000575426 RPS6KA4O75676 772 aa19.87■□□□□ 0.77
LITAF-217ENST00000575426 SNRPA1P09661 255 aaKnown RBP19.87■□□□□ 0.77
LITAF-217ENST00000575426 CYP19A1P11511 503 aaPredicted RBP19.87■□□□□ 0.77
LITAF-217ENST00000575426 TRAPPC3LQ5T215 181 aa19.87■□□□□ 0.77
LITAF-217ENST00000575426 MTFR1LQ9H019 292 aa19.87■□□□□ 0.77
LITAF-217ENST00000575426 CCDC87Q9NVE4 849 aa19.87■□□□□ 0.77
LITAF-217ENST00000575426 ATF5Q9Y2D1 282 aaPredicted RBP19.87■□□□□ 0.77
LITAF-217ENST00000575426 LRP5O75197 1615 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms