RNA–Protein interactions for RNA: ENST00000575272.1

STRA6-221, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 4

Gene STRA6, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-221ENST00000575272 SALL2Q9Y467 1007 aaPredicted RBP13.5□□□□□ -0.25
STRA6-221ENST00000575272 PRIM1P49642 420 aaKnown RBP13.49□□□□□ -0.25
STRA6-221ENST00000575272 DCTN1Q14203 1278 aa13.49□□□□□ -0.25
STRA6-221ENST00000575272 TOGARAM1Q9Y4F4 1720 aa13.49□□□□□ -0.25
STRA6-221ENST00000575272 SCN11AQ9UI33 1791 aa13.48□□□□□ -0.25
STRA6-221ENST00000575272 NHSQ6T4R5 1651 aa13.48□□□□□ -0.25
STRA6-221ENST00000575272 ERVV-2B6SEH9 535 aa13.48□□□□□ -0.25
STRA6-221ENST00000575272 TRIM37O94972 964 aa13.48□□□□□ -0.25
STRA6-221ENST00000575272 NGEFQ8N5V2 710 aa13.48□□□□□ -0.25
STRA6-221ENST00000575272 THUMPD2Q9BTF0 503 aaKnown RBP13.48□□□□□ -0.25
STRA6-221ENST00000575272 LGR6Q9HBX8 967 aa13.48□□□□□ -0.25
STRA6-221ENST00000575272 HNRNPUQ00839 825 aaKnown RBP eCLIP13.47□□□□□ -0.25
STRA6-221ENST00000575272 CALD1Q05682 793 aaKnown RBP13.47□□□□□ -0.25
STRA6-221ENST00000575272 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
STRA6-221ENST00000575272 ILDR2Q71H61 639 aa13.47□□□□□ -0.25
STRA6-221ENST00000575272 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
STRA6-221ENST00000575272 VIRMAQ69YN4 1812 aaKnown RBP13.47□□□□□ -0.25
STRA6-221ENST00000575272 KCNQ2O43526 872 aa13.46□□□□□ -0.25
STRA6-221ENST00000575272 BCL11BQ9C0K0 894 aaPredicted RBP13.46□□□□□ -0.25
STRA6-221ENST00000575272 SLC52A2Q9HAB3 445 aa13.46□□□□□ -0.25
STRA6-221ENST00000575272 MRC1P22897 1456 aa13.46□□□□□ -0.25
STRA6-221ENST00000575272 ADAMTS7Q9UKP4 1686 aa13.46□□□□□ -0.26
STRA6-221ENST00000575272 SBF2Q86WG5 1849 aa13.46□□□□□ -0.26
STRA6-221ENST00000575272 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
STRA6-221ENST00000575272 NFATC2IPQ8NCF5 419 aa13.45□□□□□ -0.26
STRA6-221ENST00000575272 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
STRA6-221ENST00000575272 ITGB4P16144 1822 aa13.45□□□□□ -0.26
STRA6-221ENST00000575272 CCDC27Q2M243 656 aa13.44□□□□□ -0.26
STRA6-221ENST00000575272 LAS1LQ9Y4W2 734 aaKnown RBP13.44□□□□□ -0.26
STRA6-221ENST00000575272 BTAF1O14981 1849 aa13.43□□□□□ -0.26
STRA6-221ENST00000575272 BTBD11A6QL63 1104 aa13.43□□□□□ -0.26
STRA6-221ENST00000575272 WWC1Q8IX03 1113 aa13.43□□□□□ -0.26
STRA6-221ENST00000575272 TTC5Q8N0Z6 440 aa13.43□□□□□ -0.26
STRA6-221ENST00000575272 PIGBQ92521 554 aa13.43□□□□□ -0.26
STRA6-221ENST00000575272 YTHDC1Q96MU7 727 aaKnown RBP13.43□□□□□ -0.26
STRA6-221ENST00000575272 EP400Q96L91 3159 aa13.42□□□□□ -0.26
STRA6-221ENST00000575272 APBA3O96018 575 aa13.42□□□□□ -0.26
STRA6-221ENST00000575272 TAF7Q15545 349 aaPredicted RBP13.42□□□□□ -0.26
STRA6-221ENST00000575272 PTF1AQ7RTS3 328 aa13.42□□□□□ -0.26
STRA6-221ENST00000575272 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
STRA6-221ENST00000575272 TSPYL4Q9UJ04 414 aa13.42□□□□□ -0.26
STRA6-221ENST00000575272 TNS1Q9HBL0 1735 aaKnown RBP13.42□□□□□ -0.26
STRA6-221ENST00000575272 BAG6P46379 1132 aa13.41□□□□□ -0.26
STRA6-221ENST00000575272 CCDC125Q86Z20 511 aa13.41□□□□□ -0.26
STRA6-221ENST00000575272 PALLDQ8WX93 1383 aa13.41□□□□□ -0.26
STRA6-221ENST00000575272 SIPA1L3O60292 1781 aaPredicted RBP13.4□□□□□ -0.26
STRA6-221ENST00000575272 GNAI1P63096 354 aa13.4□□□□□ -0.26
STRA6-221ENST00000575272 SLC39A6Q13433 755 aa13.4□□□□□ -0.26
STRA6-221ENST00000575272 WDR63Q8IWG1 891 aa13.4□□□□□ -0.26
STRA6-221ENST00000575272 ASAP1Q9ULH1 1129 aa13.4□□□□□ -0.26
STRA6-221ENST00000575272 SOCS7O14512 581 aa13.39□□□□□ -0.27
STRA6-221ENST00000575272 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
STRA6-221ENST00000575272 ATG3Q9NT62 314 aa13.39□□□□□ -0.27
STRA6-221ENST00000575272 IFT57Q9NWB7 429 aa13.39□□□□□ -0.27
STRA6-221ENST00000575272 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
STRA6-221ENST00000575272 IL16Q14005 1332 aa13.39□□□□□ -0.27
STRA6-221ENST00000575272 PTCD1O75127 700 aaKnown RBP13.38□□□□□ -0.27
STRA6-221ENST00000575272 ZNF790Q6PG37 636 aa13.38□□□□□ -0.27
STRA6-221ENST00000575272 UPF1Q92900 1129 aaKnown RBP eCLIP13.38□□□□□ -0.27
STRA6-221ENST00000575272 CFAP44Q96MT7 982 aa13.38□□□□□ -0.27
STRA6-221ENST00000575272 PAPPAQ13219 1627 aa13.38□□□□□ -0.27
STRA6-221ENST00000575272 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
STRA6-221ENST00000575272 FMNL2Q96PY5 1086 aa13.37□□□□□ -0.27
STRA6-221ENST00000575272 MYH16Q9H6N6 1097 aa13.37□□□□□ -0.27
STRA6-221ENST00000575272 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
STRA6-221ENST00000575272 ZBED9Q6R2W3 1325 aa13.37□□□□□ -0.27
STRA6-221ENST00000575272 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
STRA6-221ENST00000575272 LOC102724428A0A0B4J2F2 783 aa13.36□□□□□ -0.27
STRA6-221ENST00000575272 SIK1P57059 783 aa13.36□□□□□ -0.27
STRA6-221ENST00000575272 EN1Q05925 392 aaPredicted RBP13.36□□□□□ -0.27
STRA6-221ENST00000575272 MBIPQ9NS73 344 aa13.36□□□□□ -0.27
STRA6-221ENST00000575272 CCNL1Q9UK58 526 aaPredicted RBP13.36□□□□□ -0.27
STRA6-221ENST00000575272 ZNF521Q96K83 1311 aa13.36□□□□□ -0.27
STRA6-221ENST00000575272 E9PSI1 815 aa13.35□□□□□ -0.27
STRA6-221ENST00000575272 CHL1O00533 1208 aa13.35□□□□□ -0.27
STRA6-221ENST00000575272 PLSCR1O15162 318 aa13.35□□□□□ -0.27
STRA6-221ENST00000575272 KCNQ3O43525 872 aa13.35□□□□□ -0.27
STRA6-221ENST00000575272 DEFB132Q7Z7B7 95 aa13.35□□□□□ -0.27
STRA6-221ENST00000575272 TSR2Q969E8 191 aaKnown RBP13.35□□□□□ -0.27
STRA6-221ENST00000575272 ZNF496Q96IT1 587 aaPredicted RBP13.35□□□□□ -0.27
STRA6-221ENST00000575272 RGPD3A6NKT7 1758 aaPredicted RBP13.35□□□□□ -0.27
STRA6-221ENST00000575272 RGPD4Q7Z3J3 1758 aa13.35□□□□□ -0.27
STRA6-221ENST00000575272 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
STRA6-221ENST00000575272 ZNF853P0CG23 659 aa13.34□□□□□ -0.27
STRA6-221ENST00000575272 ATP6V1AP38606 617 aa13.34□□□□□ -0.27
STRA6-221ENST00000575272 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
STRA6-221ENST00000575272 UBR2Q8IWV8 1755 aa13.34□□□□□ -0.27
STRA6-221ENST00000575272 FANCIQ9NVI1 1328 aa13.34□□□□□ -0.27
STRA6-221ENST00000575272 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.27
STRA6-221ENST00000575272 LY75O60449 1722 aa13.33□□□□□ -0.27
STRA6-221ENST00000575272 EZH2Q15910 746 aaKnown RBP13.33□□□□□ -0.28
STRA6-221ENST00000575272 SLC27A3Q5K4L6 730 aa13.33□□□□□ -0.28
STRA6-221ENST00000575272 SNRPA1P09661 255 aaKnown RBP13.32□□□□□ -0.28
STRA6-221ENST00000575272 ATXN8OSP0DMR3 200 aa13.32□□□□□ -0.28
STRA6-221ENST00000575272 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
STRA6-221ENST00000575272 KCNQ4P56696 695 aa13.32□□□□□ -0.28
STRA6-221ENST00000575272 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
STRA6-221ENST00000575272 SLFN5Q08AF3 891 aa13.31□□□□□ -0.28
STRA6-221ENST00000575272 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
STRA6-221ENST00000575272 CDCA7LQ96GN5 454 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms