RNA–Protein interactions for RNA: ENST00000574822.6

CACNA1A-204, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-204ENST00000574822 THUMPD2Q9BTF0 503 aaKnown RBP15.86■□□□□ 0.13
CACNA1A-204ENST00000574822 IL16Q14005 1332 aa15.86■□□□□ 0.13
CACNA1A-204ENST00000574822 BTAF1O14981 1849 aa15.85■□□□□ 0.13
CACNA1A-204ENST00000574822 GNAI1P63096 354 aa15.85■□□□□ 0.13
CACNA1A-204ENST00000574822 BCL11BQ9C0K0 894 aaPredicted RBP15.85■□□□□ 0.13
CACNA1A-204ENST00000574822 BABAM1Q9NWV8 329 aa15.85■□□□□ 0.13
CACNA1A-204ENST00000574822 PAPPAQ13219 1627 aa15.84■□□□□ 0.13
CACNA1A-204ENST00000574822 BTBD11A6QL63 1104 aa15.84■□□□□ 0.13
CACNA1A-204ENST00000574822 GOLGA2Q08379 1002 aa15.84■□□□□ 0.13
CACNA1A-204ENST00000574822 TTC5Q8N0Z6 440 aa15.84■□□□□ 0.13
CACNA1A-204ENST00000574822 IFT57Q9NWB7 429 aa15.84■□□□□ 0.13
CACNA1A-204ENST00000574822 LAS1LQ9Y4W2 734 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-204ENST00000574822 KDM3BQ7LBC6 1761 aa15.83■□□□□ 0.12
CACNA1A-204ENST00000574822 TRIM37O94972 964 aa15.83■□□□□ 0.12
CACNA1A-204ENST00000574822 SF3B2Q13435 895 aaKnown RBP15.83■□□□□ 0.12
CACNA1A-204ENST00000574822 SMARCC1Q92922 1105 aaPredicted RBP15.83■□□□□ 0.12
CACNA1A-204ENST00000574822 CFAP44Q96MT7 982 aa15.83■□□□□ 0.12
CACNA1A-204ENST00000574822 MYH16Q9H6N6 1097 aa15.83■□□□□ 0.12
CACNA1A-204ENST00000574822 TSPYL4Q9UJ04 414 aa15.83■□□□□ 0.12
CACNA1A-204ENST00000574822 ZNF521Q96K83 1311 aa15.83■□□□□ 0.12
CACNA1A-204ENST00000574822 TNS1Q9HBL0 1735 aaKnown RBP15.82■□□□□ 0.12
CACNA1A-204ENST00000574822 PIGBQ92521 554 aa15.82■□□□□ 0.12
CACNA1A-204ENST00000574822 E9PSI1 815 aa15.81■□□□□ 0.12
CACNA1A-204ENST00000574822 KCNQ2O43526 872 aa15.81■□□□□ 0.12
CACNA1A-204ENST00000574822 UBR2Q8IWV8 1755 aa15.8■□□□□ 0.12
CACNA1A-204ENST00000574822 CHL1O00533 1208 aa15.79■□□□□ 0.12
CACNA1A-204ENST00000574822 ZNF790Q6PG37 636 aa15.79■□□□□ 0.12
CACNA1A-204ENST00000574822 CCDC125Q86Z20 511 aa15.79■□□□□ 0.12
CACNA1A-204ENST00000574822 RGPD3A6NKT7 1758 aaPredicted RBP15.79■□□□□ 0.12
CACNA1A-204ENST00000574822 RGPD4Q7Z3J3 1758 aa15.79■□□□□ 0.12
CACNA1A-204ENST00000574822 PALLDQ8WX93 1383 aa15.78■□□□□ 0.12
CACNA1A-204ENST00000574822 APBA3O96018 575 aa15.77■□□□□ 0.12
CACNA1A-204ENST00000574822 ZNF853P0CG23 659 aa15.77■□□□□ 0.12
CACNA1A-204ENST00000574822 HMGB2P26583 209 aaKnown RBP15.77■□□□□ 0.12
CACNA1A-204ENST00000574822 SLC39A6Q13433 755 aa15.77■□□□□ 0.12
CACNA1A-204ENST00000574822 FMNL2Q96PY5 1086 aa15.77■□□□□ 0.12
CACNA1A-204ENST00000574822 MBIPQ9NS73 344 aa15.77■□□□□ 0.12
CACNA1A-204ENST00000574822 ATG3Q9NT62 314 aa15.77■□□□□ 0.12
CACNA1A-204ENST00000574822 MIS18AQ9NYP9 233 aa15.77■□□□□ 0.12
CACNA1A-204ENST00000574822 ASAP1Q9ULH1 1129 aa15.77■□□□□ 0.12
CACNA1A-204ENST00000574822 LY75O60449 1722 aa15.77■□□□□ 0.11
CACNA1A-204ENST00000574822 FANCIQ9NVI1 1328 aa15.76■□□□□ 0.11
CACNA1A-204ENST00000574822 BAG6P46379 1132 aa15.76■□□□□ 0.11
CACNA1A-204ENST00000574822 ZNF831Q5JPB2 1677 aa15.76■□□□□ 0.11
CACNA1A-204ENST00000574822 KCPQ6ZWJ8 1503 aa15.75■□□□□ 0.11
CACNA1A-204ENST00000574822 PTCD1O75127 700 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-204ENST00000574822 SLFN5Q08AF3 891 aa15.75■□□□□ 0.11
CACNA1A-204ENST00000574822 TSR2Q969E8 191 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-204ENST00000574822 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-204ENST00000574822 PLSCR1O15162 318 aa15.74■□□□□ 0.11
CACNA1A-204ENST00000574822 PTF1AQ7RTS3 328 aa15.74■□□□□ 0.11
CACNA1A-204ENST00000574822 CHMP4AQ9BY43 222 aa15.74■□□□□ 0.11
CACNA1A-204ENST00000574822 LAMB4A4D0S4 1761 aa15.74■□□□□ 0.11
CACNA1A-204ENST00000574822 HEG1Q9ULI3 1381 aa15.74■□□□□ 0.11
CACNA1A-204ENST00000574822 SOS1Q07889 1333 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-204ENST00000574822 CICQ96RK0 1608 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-204ENST00000574822 LOC102724428A0A0B4J2F2 783 aa15.73■□□□□ 0.11
CACNA1A-204ENST00000574822 SIK1P57059 783 aa15.73■□□□□ 0.11
CACNA1A-204ENST00000574822 EIF4A1P60842 406 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-204ENST00000574822 VSIG10Q8N0Z9 540 aa15.73■□□□□ 0.11
CACNA1A-204ENST00000574822 CDCA7LQ96GN5 454 aa15.73■□□□□ 0.11
CACNA1A-204ENST00000574822 ZNF496Q96IT1 587 aaPredicted RBP15.73■□□□□ 0.11
CACNA1A-204ENST00000574822 SNRPA1P09661 255 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-204ENST00000574822 SLC27A3Q5K4L6 730 aa15.72■□□□□ 0.11
CACNA1A-204ENST00000574822 TEX13AQ9BXU3 409 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-204ENST00000574822 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-204ENST00000574822 CCNL1Q9UK58 526 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-204ENST00000574822 KCNQ3O43525 872 aa15.71■□□□□ 0.11
CACNA1A-204ENST00000574822 HOXB7P09629 217 aa15.71■□□□□ 0.11
CACNA1A-204ENST00000574822 ATP6V1AP38606 617 aa15.71■□□□□ 0.11
CACNA1A-204ENST00000574822 ILDR2Q71H61 639 aa15.71■□□□□ 0.11
CACNA1A-204ENST00000574822 TJP1Q07157 1748 aa15.71■□□□□ 0.1
CACNA1A-204ENST00000574822 C5P01031 1676 aa15.7■□□□□ 0.1
CACNA1A-204ENST00000574822 STARD3NLO95772 234 aa15.69■□□□□ 0.1
CACNA1A-204ENST00000574822 EXOSC9Q06265 439 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-204ENST00000574822 TWISTNBQ3B726 338 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-204ENST00000574822 DUSP27Q5VZP5 1158 aa15.69■□□□□ 0.1
CACNA1A-204ENST00000574822 TRMT2AQ8IZ69 625 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-204ENST00000574822 COL5A3P25940 1745 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-204ENST00000574822 TAF1LQ8IZX4 1826 aa15.68■□□□□ 0.1
CACNA1A-204ENST00000574822 GIGYF1O75420 1035 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-204ENST00000574822 CT47B1P0C2W7 299 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-204ENST00000574822 TXNRD1Q16881 649 aa15.68■□□□□ 0.1
CACNA1A-204ENST00000574822 UPF1Q92900 1129 aaKnown RBP eCLIP15.68■□□□□ 0.1
CACNA1A-204ENST00000574822 EP400Q96L91 3159 aa15.67■□□□□ 0.1
CACNA1A-204ENST00000574822 RREB1Q92766 1687 aa15.67■□□□□ 0.1
CACNA1A-204ENST00000574822 EN1Q05925 392 aaPredicted RBP15.67■□□□□ 0.1
CACNA1A-204ENST00000574822 ELL2O00472 640 aaPredicted RBP15.66■□□□□ 0.1
CACNA1A-204ENST00000574822 HDGFL1Q5TGJ6 251 aa15.66■□□□□ 0.1
CACNA1A-204ENST00000574822 DNAJC10Q8IXB1 793 aa15.66■□□□□ 0.1
CACNA1A-204ENST00000574822 C8orf58Q8NAV2 365 aa15.66■□□□□ 0.1
CACNA1A-204ENST00000574822 ZNF428Q96B54 188 aa15.66■□□□□ 0.1
CACNA1A-204ENST00000574822 KRT24Q2M2I5 525 aa15.65■□□□□ 0.1
CACNA1A-204ENST00000574822 CAMKK2Q96RR4 588 aa15.65■□□□□ 0.1
CACNA1A-204ENST00000574822 STK31Q9BXU1 1019 aa15.65■□□□□ 0.1
CACNA1A-204ENST00000574822 C4BP0C0L5 1744 aa15.65■□□□□ 0.1
CACNA1A-204ENST00000574822 ERBB4Q15303 1308 aa15.65■□□□□ 0.1
CACNA1A-204ENST00000574822 EIF2S2P20042 333 aaKnown RBP15.64■□□□□ 0.09
CACNA1A-204ENST00000574822 EZH2Q15910 746 aaKnown RBP15.64■□□□□ 0.09
CACNA1A-204ENST00000574822 NUP188Q5SRE5 1749 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms