RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 TEFQ10587 303 aa32.11■■■□□ 2.73
LITAF-213ENST00000574701 ATG3Q9NT62 314 aa32.11■■■□□ 2.73
LITAF-213ENST00000574701 LRRC4BQ9NT99 713 aa32.11■■■□□ 2.73
LITAF-213ENST00000574701 C5P01031 1676 aa32.11■■■□□ 2.73
LITAF-213ENST00000574701 PSDA5PKW4 1024 aaPredicted RBP32.1■■■□□ 2.73
LITAF-213ENST00000574701 R3HDM1Q15032 1099 aaKnown RBP32.1■■■□□ 2.73
LITAF-213ENST00000574701 NFE2L2Q16236 605 aa32.1■■■□□ 2.73
LITAF-213ENST00000574701 ANO8Q9HCE9 1232 aaPredicted RBP32.1■■■□□ 2.73
LITAF-213ENST00000574701 ADAMTS8Q9UP79 889 aa32.1■■■□□ 2.73
LITAF-213ENST00000574701 HTATSF1O43719 755 aaKnown RBP32.09■■■□□ 2.73
LITAF-213ENST00000574701 CCDC184Q52MB2 194 aa32.08■■■□□ 2.73
LITAF-213ENST00000574701 CCDC146Q8IYE0 955 aa32.08■■■□□ 2.73
LITAF-213ENST00000574701 IL17REQ8NFR9 667 aa32.08■■■□□ 2.73
LITAF-213ENST00000574701 RUNDC1Q96C34 613 aa32.08■■■□□ 2.73
LITAF-213ENST00000574701 CEMIPQ8WUJ3 1361 aa32.07■■■□□ 2.73
LITAF-213ENST00000574701 SIPA1L3O60292 1781 aaPredicted RBP32.07■■■□□ 2.72
LITAF-213ENST00000574701 LOC102724428A0A0B4J2F2 783 aa32.07■■■□□ 2.72
LITAF-213ENST00000574701 KCNQ4P56696 695 aa32.07■■■□□ 2.72
LITAF-213ENST00000574701 SIK1P57059 783 aa32.07■■■□□ 2.72
LITAF-213ENST00000574701 TAF1LQ8IZX4 1826 aa32.07■■■□□ 2.72
LITAF-213ENST00000574701 SLC15A2Q16348 729 aa32.04■■■□□ 2.72
LITAF-213ENST00000574701 MCM10Q7L590 875 aa32.04■■■□□ 2.72
LITAF-213ENST00000574701 RBM42Q9BTD8 480 aaKnown RBP32.04■■■□□ 2.72
LITAF-213ENST00000574701 ZNF831Q5JPB2 1677 aa32.03■■■□□ 2.72
LITAF-213ENST00000574701 ATP6V1AP38606 617 aa32.03■■■□□ 2.72
LITAF-213ENST00000574701 LMOD3Q0VAK6 560 aa32.01■■■□□ 2.71
LITAF-213ENST00000574701 TTC5Q8N0Z6 440 aa32.01■■■□□ 2.71
LITAF-213ENST00000574701 TMPOP42166 694 aaKnown RBP32■■■□□ 2.71
LITAF-213ENST00000574701 DCTN1Q14203 1278 aa32■■■□□ 2.71
LITAF-213ENST00000574701 C4BP0C0L5 1744 aa32■■■□□ 2.71
LITAF-213ENST00000574701 PTCD1O75127 700 aaKnown RBP31.99■■■□□ 2.71
LITAF-213ENST00000574701 RIPK4P57078 832 aa31.99■■■□□ 2.71
LITAF-213ENST00000574701 ZNF827Q17R98 1081 aa31.99■■■□□ 2.71
LITAF-213ENST00000574701 QSER1Q2KHR3 1735 aa31.98■■■□□ 2.71
LITAF-213ENST00000574701 SLC39A6Q13433 755 aa31.98■■■□□ 2.71
LITAF-213ENST00000574701 AKT1S1Q96B36 256 aa31.98■■■□□ 2.71
LITAF-213ENST00000574701 UBR2Q8IWV8 1755 aa31.98■■■□□ 2.71
LITAF-213ENST00000574701 PNISRQ8TF01 805 aaKnown RBP31.97■■■□□ 2.71
LITAF-213ENST00000574701 KCPQ6ZWJ8 1503 aa31.96■■■□□ 2.71
LITAF-213ENST00000574701 BTBD11A6QL63 1104 aa31.96■■■□□ 2.71
LITAF-213ENST00000574701 RRP7AQ9Y3A4 280 aaKnown RBP31.96■■■□□ 2.71
LITAF-213ENST00000574701 CICQ96RK0 1608 aaPredicted RBP31.96■■■□□ 2.71
LITAF-213ENST00000574701 TUBGCP6Q96RT7 1819 aa31.96■■■□□ 2.71
LITAF-213ENST00000574701 TFCP2L1Q9NZI6 479 aa31.95■■■□□ 2.71
LITAF-213ENST00000574701 COL5A3P25940 1745 aaPredicted RBP31.95■■■□□ 2.7
LITAF-213ENST00000574701 ITPK1Q13572 414 aa31.94■■■□□ 2.7
LITAF-213ENST00000574701 NEUROD2Q15784 382 aa31.94■■■□□ 2.7
LITAF-213ENST00000574701 AK7Q96M32 723 aa31.94■■■□□ 2.7
LITAF-213ENST00000574701 CASZ1Q86V15 1759 aa31.94■■■□□ 2.7
LITAF-213ENST00000574701 TJP1Q07157 1748 aa31.93■■■□□ 2.7
LITAF-213ENST00000574701 DIEXFQ68CQ4 756 aaKnown RBP31.93■■■□□ 2.7
LITAF-213ENST00000574701 LINC00116Q8NCU8 138 aa31.93■■■□□ 2.7
LITAF-213ENST00000574701 ZNF790Q6PG37 636 aa31.92■■■□□ 2.7
LITAF-213ENST00000574701 SLC4A9Q96Q91 983 aa31.92■■■□□ 2.7
LITAF-213ENST00000574701 TAF7Q15545 349 aaPredicted RBP31.9■■■□□ 2.7
LITAF-213ENST00000574701 THUMPD2Q9BTF0 503 aaKnown RBP31.89■■■□□ 2.7
LITAF-213ENST00000574701 APAF1O14727 1248 aa31.88■■■□□ 2.69
LITAF-213ENST00000574701 UBR3Q6ZT12 1888 aa31.87■■■□□ 2.69
LITAF-213ENST00000574701 VSIG10Q8N0Z9 540 aa31.87■■■□□ 2.69
LITAF-213ENST00000574701 FMNL2Q96PY5 1086 aa31.87■■■□□ 2.69
LITAF-213ENST00000574701 KDM3BQ7LBC6 1761 aa31.86■■■□□ 2.69
LITAF-213ENST00000574701 PNPLA7Q6ZV29 1317 aa31.86■■■□□ 2.69
LITAF-213ENST00000574701 CNTNAP4Q9C0A0 1308 aa31.86■■■□□ 2.69
LITAF-213ENST00000574701 HEG1Q9ULI3 1381 aa31.85■■■□□ 2.69
LITAF-213ENST00000574701 FAM9BQ8IZU0 186 aa31.85■■■□□ 2.69
LITAF-213ENST00000574701 GNPATO15228 680 aa31.84■■■□□ 2.69
LITAF-213ENST00000574701 FLAD1Q8NFF5 587 aa31.84■■■□□ 2.69
LITAF-213ENST00000574701 ZNF496Q96IT1 587 aaPredicted RBP31.84■■■□□ 2.69
LITAF-213ENST00000574701 LRP5O75197 1615 aa31.83■■■□□ 2.69
LITAF-213ENST00000574701 DNAJC10Q8IXB1 793 aa31.83■■■□□ 2.69
LITAF-213ENST00000574701 CCER2I3L3R5 266 aa31.82■■■□□ 2.68
LITAF-213ENST00000574701 RC3H1Q5TC82 1133 aaKnown RBP31.82■■■□□ 2.68
LITAF-213ENST00000574701 TRIM35Q9UPQ4 493 aa31.82■■■□□ 2.68
LITAF-213ENST00000574701 MSH5O43196 834 aa31.81■■■□□ 2.68
LITAF-213ENST00000574701 KCNQ3O43525 872 aa31.81■■■□□ 2.68
LITAF-213ENST00000574701 PDGFDQ9GZP0 370 aaPredicted RBP31.81■■■□□ 2.68
LITAF-213ENST00000574701 PHF14O94880 888 aa31.8■■■□□ 2.68
LITAF-213ENST00000574701 SSFA2P28290 1259 aa31.8■■■□□ 2.68
LITAF-213ENST00000574701 CRKLP46109 303 aaKnown RBP31.8■■■□□ 2.68
LITAF-213ENST00000574701 MIS18AQ9NYP9 233 aa31.8■■■□□ 2.68
LITAF-213ENST00000574701 TEX13AQ9BXU3 409 aaPredicted RBP31.79■■■□□ 2.68
LITAF-213ENST00000574701 RTCBQ9Y3I0 505 aaKnown RBP31.79■■■□□ 2.68
LITAF-213ENST00000574701 MYH14Q7Z406 1995 aaKnown RBP31.78■■■□□ 2.68
LITAF-213ENST00000574701 TSPYL4Q9UJ04 414 aa31.78■■■□□ 2.68
LITAF-213ENST00000574701 ZBTB7AO95365 584 aa31.77■■■□□ 2.68
LITAF-213ENST00000574701 COL23A1Q86Y22 540 aaPredicted RBP31.77■■■□□ 2.68
LITAF-213ENST00000574701 SLC16A10Q8TF71 515 aa31.77■■■□□ 2.68
LITAF-213ENST00000574701 MTFR1LQ9H019 292 aa31.77■■■□□ 2.68
LITAF-213ENST00000574701 SPON1Q9HCB6 807 aa31.77■■■□□ 2.68
LITAF-213ENST00000574701 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.76■■■□□ 2.67
LITAF-213ENST00000574701 STARD3NLO95772 234 aa31.76■■■□□ 2.67
LITAF-213ENST00000574701 CALD1Q05682 793 aaKnown RBP31.76■■■□□ 2.67
LITAF-213ENST00000574701 CCDC87Q9NVE4 849 aa31.76■■■□□ 2.67
LITAF-213ENST00000574701 BABAM1Q9NWV8 329 aa31.76■■■□□ 2.67
LITAF-213ENST00000574701 CYP19A1P11511 503 aaPredicted RBP31.75■■■□□ 2.67
LITAF-213ENST00000574701 RPS6KA4O75676 772 aa31.74■■■□□ 2.67
LITAF-213ENST00000574701 SNRPA1P09661 255 aaKnown RBP31.73■■■□□ 2.67
LITAF-213ENST00000574701 ADRA2BP18089 450 aa31.73■■■□□ 2.67
LITAF-213ENST00000574701 LAMB4A4D0S4 1761 aa31.73■■■□□ 2.67
LITAF-213ENST00000574701 AMIGO3Q86WK7 504 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms