RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 KIF24Q5T7B8 1368 aa17.36■□□□□ 0.37
SMG6-215ENST00000574501 CTIFO43310 598 aaKnown RBP17.36■□□□□ 0.37
SMG6-215ENST00000574501 RILPL2Q969X0 211 aa17.36■□□□□ 0.37
SMG6-215ENST00000574501 ARHGEF28Q8N1W1 1705 aaKnown RBP17.36■□□□□ 0.37
SMG6-215ENST00000574501 YEATS2Q9ULM3 1422 aa17.35■□□□□ 0.37
SMG6-215ENST00000574501 FIBPO43427 364 aa17.35■□□□□ 0.37
SMG6-215ENST00000574501 BCL11BQ9C0K0 894 aaPredicted RBP17.35■□□□□ 0.37
SMG6-215ENST00000574501 DTNBO60941 627 aa17.35■□□□□ 0.37
SMG6-215ENST00000574501 LARP6Q9BRS8 491 aaKnown RBP17.35■□□□□ 0.37
SMG6-215ENST00000574501 ABCA9Q8IUA7 1624 aa17.34■□□□□ 0.37
SMG6-215ENST00000574501 TRIM6-TRIM34B2RNG4 842 aa17.34■□□□□ 0.37
SMG6-215ENST00000574501 ZBTB22O15209 634 aa17.34■□□□□ 0.37
SMG6-215ENST00000574501 NCBP1Q09161 790 aaKnown RBP17.34■□□□□ 0.37
SMG6-215ENST00000574501 CAMSAP1Q5T5Y3 1602 aa17.34■□□□□ 0.37
SMG6-215ENST00000574501 EXOC6BQ9Y2D4 811 aa17.33■□□□□ 0.37
SMG6-215ENST00000574501 RPAP1Q9BWH6 1393 aaPredicted RBP17.33■□□□□ 0.37
SMG6-215ENST00000574501 UBE2HP62256 183 aa17.33■□□□□ 0.36
SMG6-215ENST00000574501 NAA30Q147X3 362 aaPredicted RBP17.33■□□□□ 0.36
SMG6-215ENST00000574501 HDGFL2Q7Z4V5 671 aaPredicted RBP17.33■□□□□ 0.36
SMG6-215ENST00000574501 TMEM87AQ8NBN3 555 aa17.33■□□□□ 0.36
SMG6-215ENST00000574501 OGFRQ9NZT2 677 aa17.33■□□□□ 0.36
SMG6-215ENST00000574501 CD163L1Q9NR16 1453 aa17.33■□□□□ 0.36
SMG6-215ENST00000574501 GGT6Q6P531 493 aa17.32■□□□□ 0.36
SMG6-215ENST00000574501 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMG6-215ENST00000574501 FEZ1Q99689 392 aa17.32■□□□□ 0.36
SMG6-215ENST00000574501 FUCA2Q9BTY2 467 aa17.32■□□□□ 0.36
SMG6-215ENST00000574501 OSBPL3Q9H4L5 887 aa17.32■□□□□ 0.36
SMG6-215ENST00000574501 TMEM51Q9NW97 253 aa17.32■□□□□ 0.36
SMG6-215ENST00000574501 CABP1Q9NZU7 370 aa17.32■□□□□ 0.36
SMG6-215ENST00000574501 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
SMG6-215ENST00000574501 PTGS1P23219 599 aa17.32■□□□□ 0.36
SMG6-215ENST00000574501 RGS12O14924 1447 aa17.32■□□□□ 0.36
SMG6-215ENST00000574501 CHMLP26374 656 aa17.31■□□□□ 0.36
SMG6-215ENST00000574501 ANAPC15P60006 121 aa17.31■□□□□ 0.36
SMG6-215ENST00000574501 C16orf45Q96MC5 204 aaPredicted RBP17.31■□□□□ 0.36
SMG6-215ENST00000574501 ZSCAN22P10073 491 aaPredicted RBP17.3■□□□□ 0.36
SMG6-215ENST00000574501 RPGRIP1LQ68CZ1 1315 aa17.3■□□□□ 0.36
SMG6-215ENST00000574501 NPATQ14207 1427 aa17.3■□□□□ 0.36
SMG6-215ENST00000574501 DIP2BQ9P265 1576 aa17.3■□□□□ 0.36
SMG6-215ENST00000574501 VGFO15240 615 aaPredicted RBP17.3■□□□□ 0.36
SMG6-215ENST00000574501 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
SMG6-215ENST00000574501 PRAM1Q96QH2 718 aa17.3■□□□□ 0.36
SMG6-215ENST00000574501 IL25Q9H293 177 aa17.3■□□□□ 0.36
SMG6-215ENST00000574501 CTNNA3Q9UI47 895 aa17.3■□□□□ 0.36
SMG6-215ENST00000574501 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
SMG6-215ENST00000574501 RIMS2Q9UQ26 1411 aa17.29■□□□□ 0.36
SMG6-215ENST00000574501 HMMRO75330 724 aa17.29■□□□□ 0.36
SMG6-215ENST00000574501 SLC4A10Q6U841 1118 aa17.29■□□□□ 0.36
SMG6-215ENST00000574501 ZFYVE9O95405 1425 aa17.29■□□□□ 0.36
SMG6-215ENST00000574501 GOLGA6L6A8MZA4 724 aa17.29■□□□□ 0.36
SMG6-215ENST00000574501 LRMPQ12912 555 aa17.29■□□□□ 0.36
SMG6-215ENST00000574501 UNC5CLQ8IV45 518 aa17.29■□□□□ 0.36
SMG6-215ENST00000574501 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
SMG6-215ENST00000574501 STX6O43752 255 aa17.28■□□□□ 0.36
SMG6-215ENST00000574501 SYT1P21579 422 aa17.28■□□□□ 0.36
SMG6-215ENST00000574501 IL13P35225 146 aa17.28■□□□□ 0.36
SMG6-215ENST00000574501 TPM3P06753 285 aa17.28■□□□□ 0.36
SMG6-215ENST00000574501 VGLL3A8MV65 326 aa17.27■□□□□ 0.36
SMG6-215ENST00000574501 LMOD3Q0VAK6 560 aa17.27■□□□□ 0.36
SMG6-215ENST00000574501 CHMP3Q9Y3E7 222 aa17.27■□□□□ 0.36
SMG6-215ENST00000574501 F6X3S4 739 aa17.27■□□□□ 0.35
SMG6-215ENST00000574501 DNM1Q05193 864 aaKnown RBP17.27■□□□□ 0.35
SMG6-215ENST00000574501 PDE4CQ08493 712 aa17.27■□□□□ 0.35
SMG6-215ENST00000574501 TAF3Q5VWG9 929 aa17.27■□□□□ 0.35
SMG6-215ENST00000574501 ABCC3O15438 1527 aa17.26■□□□□ 0.35
SMG6-215ENST00000574501 F13A1P00488 732 aa17.26■□□□□ 0.35
SMG6-215ENST00000574501 CCDC186Q7Z3E2 898 aa17.26■□□□□ 0.35
SMG6-215ENST00000574501 CDK19Q9BWU1 502 aa17.26■□□□□ 0.35
SMG6-215ENST00000574501 SLFN14P0C7P3 912 aa17.26■□□□□ 0.35
SMG6-215ENST00000574501 NRBP1Q9UHY1 535 aa17.26■□□□□ 0.35
SMG6-215ENST00000574501 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
SMG6-215ENST00000574501 DDX41Q9UJV9 622 aaKnown RBP17.25■□□□□ 0.35
SMG6-215ENST00000574501 TNNT1P13805 278 aa17.25■□□□□ 0.35
SMG6-215ENST00000574501 LUZP1Q86V48 1076 aa17.25■□□□□ 0.35
SMG6-215ENST00000574501 DRC7Q8IY82 874 aa17.25■□□□□ 0.35
SMG6-215ENST00000574501 SALL3Q9BXA9 1300 aa17.24■□□□□ 0.35
SMG6-215ENST00000574501 ARAP3Q8WWN8 1544 aa17.24■□□□□ 0.35
SMG6-215ENST00000574501 CCDC192P0DO97 292 aa17.24■□□□□ 0.35
SMG6-215ENST00000574501 CAMK4Q16566 473 aa17.24■□□□□ 0.35
SMG6-215ENST00000574501 LRRCC1Q9C099 1032 aa17.24■□□□□ 0.35
SMG6-215ENST00000574501 DLG5Q8TDM6 1919 aa17.24■□□□□ 0.35
SMG6-215ENST00000574501 SMTNL1A8MU46 457 aa17.23■□□□□ 0.35
SMG6-215ENST00000574501 MAP4K4O95819 1239 aaPredicted RBP17.23■□□□□ 0.35
SMG6-215ENST00000574501 AK2P54819 239 aa17.23■□□□□ 0.35
SMG6-215ENST00000574501 GABPB1Q06547 395 aaPredicted RBP17.23■□□□□ 0.35
SMG6-215ENST00000574501 SMC3Q9UQE7 1217 aa17.23■□□□□ 0.35
SMG6-215ENST00000574501 YTHDC2Q9H6S0 1430 aaKnown RBP17.23■□□□□ 0.35
SMG6-215ENST00000574501 HSPA4P34932 840 aa17.23■□□□□ 0.35
SMG6-215ENST00000574501 MCM10Q7L590 875 aa17.23■□□□□ 0.35
SMG6-215ENST00000574501 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
SMG6-215ENST00000574501 TSPOAP1O95153 1857 aa17.23■□□□□ 0.35
SMG6-215ENST00000574501 CPA1P15085 419 aa17.22■□□□□ 0.35
SMG6-215ENST00000574501 ZNF592Q92610 1267 aa17.22■□□□□ 0.35
SMG6-215ENST00000574501 KIF13AQ9H1H9 1805 aa17.22■□□□□ 0.35
SMG6-215ENST00000574501 LMTK2Q8IWU2 1503 aa17.22■□□□□ 0.35
SMG6-215ENST00000574501 PTPRCP08575 1304 aa17.22■□□□□ 0.35
SMG6-215ENST00000574501 MAP2P11137 1827 aaKnown RBP17.22■□□□□ 0.35
SMG6-215ENST00000574501 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
SMG6-215ENST00000574501 RUFY3Q7L099 469 aa17.22■□□□□ 0.35
SMG6-215ENST00000574501 G2E3Q7L622 706 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms