RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
SMG6-211ENST00000572369 NHSQ6T4R5 1651 aa10.47□□□□□ -0.73
SMG6-211ENST00000572369 DIAPH1O60610 1272 aaKnown RBP10.46□□□□□ -0.73
SMG6-211ENST00000572369 IGSF1Q8N6C5 1336 aa10.46□□□□□ -0.73
SMG6-211ENST00000572369 PKD1L3Q7Z443 1732 aa10.46□□□□□ -0.74
SMG6-211ENST00000572369 PNPLA7Q6ZV29 1317 aa10.45□□□□□ -0.74
SMG6-211ENST00000572369 CCDC85CA6NKD9 419 aa10.45□□□□□ -0.74
SMG6-211ENST00000572369 U2SURPO15042 1029 aaKnown RBP10.45□□□□□ -0.74
SMG6-211ENST00000572369 SULT6B1Q6IMI4 303 aa10.45□□□□□ -0.74
SMG6-211ENST00000572369 BTAF1O14981 1849 aa10.44□□□□□ -0.74
SMG6-211ENST00000572369 NCAPD2Q15021 1401 aa10.44□□□□□ -0.74
SMG6-211ENST00000572369 PPP2R1AP30153 589 aa10.44□□□□□ -0.74
SMG6-211ENST00000572369 IL13P35225 146 aa10.44□□□□□ -0.74
SMG6-211ENST00000572369 PLEKHO1Q53GL0 409 aaPredicted RBP10.44□□□□□ -0.74
SMG6-211ENST00000572369 CD2APQ9Y5K6 639 aa10.44□□□□□ -0.74
SMG6-211ENST00000572369 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
SMG6-211ENST00000572369 HMOX1P09601 288 aa10.43□□□□□ -0.74
SMG6-211ENST00000572369 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
SMG6-211ENST00000572369 CTCFP49711 727 aaPredicted RBP10.43□□□□□ -0.74
SMG6-211ENST00000572369 AEBP1Q8IUX7 1158 aa10.43□□□□□ -0.74
SMG6-211ENST00000572369 AKT1S1Q96B36 256 aa10.43□□□□□ -0.74
SMG6-211ENST00000572369 NUDCQ9Y266 331 aa10.43□□□□□ -0.74
SMG6-211ENST00000572369 C10orf71Q711Q0 1435 aa10.42□□□□□ -0.74
SMG6-211ENST00000572369 CYP27B1O15528 508 aa10.42□□□□□ -0.74
SMG6-211ENST00000572369 AMOTQ4VCS5 1084 aa10.42□□□□□ -0.74
SMG6-211ENST00000572369 C1orf141Q5JVX7 400 aa10.42□□□□□ -0.74
SMG6-211ENST00000572369 ZNF530Q6P9A1 599 aaPredicted RBP10.42□□□□□ -0.74
SMG6-211ENST00000572369 IFNL2Q8IZJ0 200 aa10.42□□□□□ -0.74
SMG6-211ENST00000572369 SMC1BQ8NDV3 1235 aa10.42□□□□□ -0.74
SMG6-211ENST00000572369 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMG6-211ENST00000572369 ITGB4P16144 1822 aa10.42□□□□□ -0.74
SMG6-211ENST00000572369 TUBGCP6Q96RT7 1819 aa10.42□□□□□ -0.74
SMG6-211ENST00000572369 PDE4DIPQ5VU43 2346 aa10.41□□□□□ -0.74
SMG6-211ENST00000572369 RALBP1Q15311 655 aa10.41□□□□□ -0.74
SMG6-211ENST00000572369 HSP90AB1P08238 724 aaKnown RBP10.4□□□□□ -0.74
SMG6-211ENST00000572369 PHKG2P15735 406 aa10.4□□□□□ -0.74
SMG6-211ENST00000572369 MPRIPQ6WCQ1 1025 aa10.4□□□□□ -0.74
SMG6-211ENST00000572369 LRRC4BQ9NT99 713 aa10.4□□□□□ -0.74
SMG6-211ENST00000572369 COL3A1P02461 1466 aaPredicted RBP10.4□□□□□ -0.74
SMG6-211ENST00000572369 PLEKHG2Q9H7P9 1386 aa10.39□□□□□ -0.75
SMG6-211ENST00000572369 TOGARAM1Q9Y4F4 1720 aa10.39□□□□□ -0.75
SMG6-211ENST00000572369 PXDNLA1KZ92 1463 aa10.39□□□□□ -0.75
SMG6-211ENST00000572369 U2AF1L5P0DN76 240 aaPredicted RBP10.39□□□□□ -0.75
SMG6-211ENST00000572369 U2AF1Q01081 240 aaKnown RBP eCLIP10.39□□□□□ -0.75
SMG6-211ENST00000572369 AIDAQ96BJ3 306 aa10.39□□□□□ -0.75
SMG6-211ENST00000572369 VIRMAQ69YN4 1812 aaKnown RBP10.39□□□□□ -0.75
SMG6-211ENST00000572369 KDRP35968 1356 aa10.39□□□□□ -0.75
SMG6-211ENST00000572369 NEFMP07197 916 aa10.38□□□□□ -0.75
SMG6-211ENST00000572369 TMOD3Q9NYL9 352 aa10.38□□□□□ -0.75
SMG6-211ENST00000572369 TFCP2L1Q9NZI6 479 aa10.38□□□□□ -0.75
SMG6-211ENST00000572369 LBX1P52954 281 aa10.37□□□□□ -0.75
SMG6-211ENST00000572369 CABP4P57796 275 aa10.37□□□□□ -0.75
SMG6-211ENST00000572369 NKX1-1Q15270 411 aaPredicted RBP10.37□□□□□ -0.75
SMG6-211ENST00000572369 DCAF5Q96JK2 942 aa10.37□□□□□ -0.75
SMG6-211ENST00000572369 TNRC6CQ9HCJ0 1690 aaKnown RBP10.37□□□□□ -0.75
SMG6-211ENST00000572369 KCPQ6ZWJ8 1503 aa10.37□□□□□ -0.75
SMG6-211ENST00000572369 MYBBP1AQ9BQG0 1328 aaKnown RBP10.36□□□□□ -0.75
SMG6-211ENST00000572369 LY75O60449 1722 aa10.36□□□□□ -0.75
SMG6-211ENST00000572369 PRKAR2BP31323 418 aa10.36□□□□□ -0.75
SMG6-211ENST00000572369 AKAP4Q5JQC9 854 aa10.36□□□□□ -0.75
SMG6-211ENST00000572369 PRPF38BQ5VTL8 546 aaKnown RBP10.36□□□□□ -0.75
SMG6-211ENST00000572369 SCN11AQ9UI33 1791 aa10.36□□□□□ -0.75
SMG6-211ENST00000572369 KDM2BQ8NHM5 1336 aa10.35□□□□□ -0.75
SMG6-211ENST00000572369 MSL1Q68DK7 614 aa10.35□□□□□ -0.75
SMG6-211ENST00000572369 PIGBQ92521 554 aa10.35□□□□□ -0.75
SMG6-211ENST00000572369 SMARCC1Q92922 1105 aaPredicted RBP10.35□□□□□ -0.75
SMG6-211ENST00000572369 CCNL1Q9UK58 526 aaPredicted RBP10.35□□□□□ -0.75
SMG6-211ENST00000572369 ERVV-2B6SEH9 535 aa10.34□□□□□ -0.75
SMG6-211ENST00000572369 FCHSD2O94868 740 aa10.34□□□□□ -0.75
SMG6-211ENST00000572369 KCNQ4P56696 695 aa10.34□□□□□ -0.75
SMG6-211ENST00000572369 MTHFSDQ2M296 383 aaKnown RBP10.34□□□□□ -0.75
SMG6-211ENST00000572369 SLC27A3Q5K4L6 730 aa10.34□□□□□ -0.75
SMG6-211ENST00000572369 GAS2L2Q8NHY3 880 aa10.34□□□□□ -0.75
SMG6-211ENST00000572369 CFAP44Q96MT7 982 aa10.34□□□□□ -0.75
SMG6-211ENST00000572369 MKRN1Q9UHC7 482 aaKnown RBP10.34□□□□□ -0.75
SMG6-211ENST00000572369 PALLDQ8WX93 1383 aa10.34□□□□□ -0.75
SMG6-211ENST00000572369 HMGB2P26583 209 aaKnown RBP10.33□□□□□ -0.76
SMG6-211ENST00000572369 RSPH6AQ9H0K4 717 aa10.33□□□□□ -0.76
SMG6-211ENST00000572369 PNNQ9H307 717 aaKnown RBP10.33□□□□□ -0.76
SMG6-211ENST00000572369 PRKRIP1Q9H875 184 aaPredicted RBP10.33□□□□□ -0.76
SMG6-211ENST00000572369 RRAGCQ9HB90 399 aa10.33□□□□□ -0.76
SMG6-211ENST00000572369 C5P01031 1676 aa10.33□□□□□ -0.76
SMG6-211ENST00000572369 KDM6AO15550 1401 aaPredicted RBP10.33□□□□□ -0.76
SMG6-211ENST00000572369 GNAT3A8MTJ3 354 aa10.32□□□□□ -0.76
SMG6-211ENST00000572369 RNMTO43148 476 aaKnown RBP10.32□□□□□ -0.76
SMG6-211ENST00000572369 MSH5O43196 834 aa10.32□□□□□ -0.76
SMG6-211ENST00000572369 ANP32CO43423 234 aa10.32□□□□□ -0.76
SMG6-211ENST00000572369 WDR43Q15061 677 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMG6-211ENST00000572369 NFATC2IPQ8NCF5 419 aa10.32□□□□□ -0.76
SMG6-211ENST00000572369 RBM42Q9BTD8 480 aaKnown RBP10.32□□□□□ -0.76
SMG6-211ENST00000572369 TAF1LQ8IZX4 1826 aa10.32□□□□□ -0.76
SMG6-211ENST00000572369 MAPK8IP3Q9UPT6 1336 aa10.32□□□□□ -0.76
SMG6-211ENST00000572369 HSPA8P11142 646 aaKnown RBP10.31□□□□□ -0.76
SMG6-211ENST00000572369 TEFQ10587 303 aa10.31□□□□□ -0.76
SMG6-211ENST00000572369 RTF1Q92541 710 aaKnown RBP10.31□□□□□ -0.76
SMG6-211ENST00000572369 PHACTR3Q96KR7 559 aa10.31□□□□□ -0.76
SMG6-211ENST00000572369 LGR6Q9HBX8 967 aa10.31□□□□□ -0.76
SMG6-211ENST00000572369 ASAP1Q9ULH1 1129 aa10.31□□□□□ -0.76
SMG6-211ENST00000572369 ATP6V1AP38606 617 aa10.3□□□□□ -0.76
SMG6-211ENST00000572369 SLC52A2Q9HAB3 445 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms