RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 BTBD11A6QL63 1104 aa12.33□□□□□ -0.44
NPLOC4-208ENST00000572351 CEMIPQ8WUJ3 1361 aa12.32□□□□□ -0.44
NPLOC4-208ENST00000572351 ZBTB22O15209 634 aa12.32□□□□□ -0.44
NPLOC4-208ENST00000572351 TAF7Q15545 349 aaPredicted RBP12.32□□□□□ -0.44
NPLOC4-208ENST00000572351 ILDR2Q71H61 639 aa12.32□□□□□ -0.44
NPLOC4-208ENST00000572351 TTC5Q8N0Z6 440 aa12.32□□□□□ -0.44
NPLOC4-208ENST00000572351 PIGBQ92521 554 aa12.32□□□□□ -0.44
NPLOC4-208ENST00000572351 WDR63Q8IWG1 891 aa12.31□□□□□ -0.44
NPLOC4-208ENST00000572351 TSPYL4Q9UJ04 414 aa12.31□□□□□ -0.44
NPLOC4-208ENST00000572351 APBA3O96018 575 aa12.3□□□□□ -0.44
NPLOC4-208ENST00000572351 GNAI1P63096 354 aa12.3□□□□□ -0.44
NPLOC4-208ENST00000572351 PTF1AQ7RTS3 328 aa12.3□□□□□ -0.44
NPLOC4-208ENST00000572351 SMARCC1Q92922 1105 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-208ENST00000572351 MIS18AQ9NYP9 233 aa12.3□□□□□ -0.44
NPLOC4-208ENST00000572351 SHANK3Q9BYB0 1731 aa12.3□□□□□ -0.44
NPLOC4-208ENST00000572351 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
NPLOC4-208ENST00000572351 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
NPLOC4-208ENST00000572351 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
NPLOC4-208ENST00000572351 IFT57Q9NWB7 429 aa12.29□□□□□ -0.44
NPLOC4-208ENST00000572351 MRC1P22897 1456 aa12.28□□□□□ -0.44
NPLOC4-208ENST00000572351 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
NPLOC4-208ENST00000572351 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
NPLOC4-208ENST00000572351 CCDC125Q86Z20 511 aa12.28□□□□□ -0.44
NPLOC4-208ENST00000572351 MYH16Q9H6N6 1097 aa12.28□□□□□ -0.44
NPLOC4-208ENST00000572351 BABAM1Q9NWV8 329 aa12.28□□□□□ -0.44
NPLOC4-208ENST00000572351 ASAP1Q9ULH1 1129 aa12.28□□□□□ -0.44
NPLOC4-208ENST00000572351 IL16Q14005 1332 aa12.28□□□□□ -0.44
NPLOC4-208ENST00000572351 ZBED9Q6R2W3 1325 aa12.28□□□□□ -0.44
NPLOC4-208ENST00000572351 PALLDQ8WX93 1383 aa12.28□□□□□ -0.44
NPLOC4-208ENST00000572351 PTCD1O75127 700 aaKnown RBP12.27□□□□□ -0.45
NPLOC4-208ENST00000572351 BAG6P46379 1132 aa12.27□□□□□ -0.45
NPLOC4-208ENST00000572351 ZNF790Q6PG37 636 aa12.27□□□□□ -0.45
NPLOC4-208ENST00000572351 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
NPLOC4-208ENST00000572351 ZNF521Q96K83 1311 aa12.27□□□□□ -0.45
NPLOC4-208ENST00000572351 BRWD3Q6RI45 1802 aa12.26□□□□□ -0.45
NPLOC4-208ENST00000572351 E9PSI1 815 aa12.26□□□□□ -0.45
NPLOC4-208ENST00000572351 CHL1O00533 1208 aa12.26□□□□□ -0.45
NPLOC4-208ENST00000572351 KCNQ3O43525 872 aa12.26□□□□□ -0.45
NPLOC4-208ENST00000572351 FMNL2Q96PY5 1086 aa12.26□□□□□ -0.45
NPLOC4-208ENST00000572351 MBIPQ9NS73 344 aa12.26□□□□□ -0.45
NPLOC4-208ENST00000572351 DOT1LQ8TEK3 1739 aa12.25□□□□□ -0.45
NPLOC4-208ENST00000572351 UPF1Q92900 1129 aaKnown RBP eCLIP12.25□□□□□ -0.45
NPLOC4-208ENST00000572351 TSR2Q969E8 191 aaKnown RBP12.25□□□□□ -0.45
NPLOC4-208ENST00000572351 CCNL1Q9UK58 526 aaPredicted RBP12.25□□□□□ -0.45
NPLOC4-208ENST00000572351 LOC102724428A0A0B4J2F2 783 aa12.24□□□□□ -0.45
NPLOC4-208ENST00000572351 ZNF853P0CG23 659 aa12.24□□□□□ -0.45
NPLOC4-208ENST00000572351 ATP6V1AP38606 617 aa12.24□□□□□ -0.45
NPLOC4-208ENST00000572351 SIK1P57059 783 aa12.24□□□□□ -0.45
NPLOC4-208ENST00000572351 EN1Q05925 392 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-208ENST00000572351 NHSQ6T4R5 1651 aa12.24□□□□□ -0.45
NPLOC4-208ENST00000572351 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-208ENST00000572351 FANCIQ9NVI1 1328 aa12.24□□□□□ -0.45
NPLOC4-208ENST00000572351 TOGARAM1Q9Y4F4 1720 aa12.24□□□□□ -0.45
NPLOC4-208ENST00000572351 ADAMTS7Q9UKP4 1686 aa12.23□□□□□ -0.45
NPLOC4-208ENST00000572351 PLSCR1O15162 318 aa12.23□□□□□ -0.45
NPLOC4-208ENST00000572351 EIF4A1P60842 406 aaKnown RBP12.23□□□□□ -0.45
NPLOC4-208ENST00000572351 TXNRD1Q16881 649 aa12.23□□□□□ -0.45
NPLOC4-208ENST00000572351 DEFB132Q7Z7B7 95 aa12.23□□□□□ -0.45
NPLOC4-208ENST00000572351 CDCA7LQ96GN5 454 aa12.23□□□□□ -0.45
NPLOC4-208ENST00000572351 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-208ENST00000572351 SNRPA1P09661 255 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-208ENST00000572351 HMGB2P26583 209 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-208ENST00000572351 SLFN5Q08AF3 891 aa12.22□□□□□ -0.45
NPLOC4-208ENST00000572351 SLC27A3Q5K4L6 730 aa12.22□□□□□ -0.45
NPLOC4-208ENST00000572351 HEG1Q9ULI3 1381 aa12.21□□□□□ -0.45
NPLOC4-208ENST00000572351 EZH2Q15910 746 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-208ENST00000572351 VSIG10Q8N0Z9 540 aa12.21□□□□□ -0.45
NPLOC4-208ENST00000572351 FOXD4L1Q9NU39 408 aa12.21□□□□□ -0.45
NPLOC4-208ENST00000572351 SCN11AQ9UI33 1791 aa12.2□□□□□ -0.46
NPLOC4-208ENST00000572351 ELL2O00472 640 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-208ENST00000572351 STARD3NLO95772 234 aa12.2□□□□□ -0.46
NPLOC4-208ENST00000572351 KCNQ4P56696 695 aa12.2□□□□□ -0.46
NPLOC4-208ENST00000572351 EXOSC9Q06265 439 aaKnown RBP12.2□□□□□ -0.46
NPLOC4-208ENST00000572351 KRT24Q2M2I5 525 aa12.2□□□□□ -0.46
NPLOC4-208ENST00000572351 DUSP27Q5VZP5 1158 aa12.2□□□□□ -0.46
NPLOC4-208ENST00000572351 DNAJC10Q8IXB1 793 aa12.2□□□□□ -0.46
NPLOC4-208ENST00000572351 TEX13AQ9BXU3 409 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-208ENST00000572351 GIGYF1O75420 1035 aaPredicted RBP12.19□□□□□ -0.46
NPLOC4-208ENST00000572351 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-208ENST00000572351 C8orf58Q8NAV2 365 aa12.19□□□□□ -0.46
NPLOC4-208ENST00000572351 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
NPLOC4-208ENST00000572351 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
NPLOC4-208ENST00000572351 KCPQ6ZWJ8 1503 aa12.18□□□□□ -0.46
NPLOC4-208ENST00000572351 PRAMEF22A3QJZ6 481 aa12.18□□□□□ -0.46
NPLOC4-208ENST00000572351 HOXB7P09629 217 aa12.18□□□□□ -0.46
NPLOC4-208ENST00000572351 ITPK1Q13572 414 aa12.18□□□□□ -0.46
NPLOC4-208ENST00000572351 TWISTNBQ3B726 338 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-208ENST00000572351 PROM2Q8N271 834 aa12.18□□□□□ -0.46
NPLOC4-208ENST00000572351 CHMP4AQ9BY43 222 aa12.18□□□□□ -0.46
NPLOC4-208ENST00000572351 HDGFL1Q5TGJ6 251 aa12.17□□□□□ -0.46
NPLOC4-208ENST00000572351 NPM2Q86SE8 214 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-208ENST00000572351 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
NPLOC4-208ENST00000572351 NECTIN2Q92692 538 aa12.17□□□□□ -0.46
NPLOC4-208ENST00000572351 AK7Q96M32 723 aa12.17□□□□□ -0.46
NPLOC4-208ENST00000572351 LRRC4BQ9NT99 713 aa12.17□□□□□ -0.46
NPLOC4-208ENST00000572351 DLG5Q8TDM6 1919 aa12.17□□□□□ -0.46
NPLOC4-208ENST00000572351 SOS1Q07889 1333 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-208ENST00000572351 NBPF14Q5TI25 921 aa12.16□□□□□ -0.46
NPLOC4-208ENST00000572351 TRMT2AQ8IZ69 625 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-208ENST00000572351 TSPYL6Q8N831 410 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms