RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ZNF827Q17R98 1081 aa11.8□□□□□ -0.52
SMG6-210ENST00000572205 PDGFDQ9GZP0 370 aaPredicted RBP11.8□□□□□ -0.52
SMG6-210ENST00000572205 SULT6B1Q6IMI4 303 aa11.79□□□□□ -0.52
SMG6-210ENST00000572205 PALLDQ8WX93 1383 aa11.79□□□□□ -0.52
SMG6-210ENST00000572205 AKT1S1Q96B36 256 aa11.78□□□□□ -0.52
SMG6-210ENST00000572205 SPINK5Q9NQ38 1064 aaPredicted RBP11.78□□□□□ -0.52
SMG6-210ENST00000572205 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.52
SMG6-210ENST00000572205 DIAPH1O60610 1272 aaKnown RBP11.77□□□□□ -0.53
SMG6-210ENST00000572205 PIGBQ92521 554 aa11.77□□□□□ -0.53
SMG6-210ENST00000572205 RSPH6AQ9H0K4 717 aa11.77□□□□□ -0.53
SMG6-210ENST00000572205 SPG7Q9UQ90 795 aa11.77□□□□□ -0.53
SMG6-210ENST00000572205 LAMB4A4D0S4 1761 aa11.77□□□□□ -0.53
SMG6-210ENST00000572205 HMOX1P09601 288 aa11.76□□□□□ -0.53
SMG6-210ENST00000572205 KCNQ4P56696 695 aa11.76□□□□□ -0.53
SMG6-210ENST00000572205 POLA2Q14181 598 aa11.76□□□□□ -0.53
SMG6-210ENST00000572205 AMIGO3Q86WK7 504 aa11.76□□□□□ -0.53
SMG6-210ENST00000572205 IFNL2Q8IZJ0 200 aa11.76□□□□□ -0.53
SMG6-210ENST00000572205 SLC4A9Q96Q91 983 aa11.76□□□□□ -0.53
SMG6-210ENST00000572205 CNGB1Q14028 1251 aaPredicted RBP11.75□□□□□ -0.53
SMG6-210ENST00000572205 ZNF530Q6P9A1 599 aaPredicted RBP11.75□□□□□ -0.53
SMG6-210ENST00000572205 CEMIPQ8WUJ3 1361 aa11.75□□□□□ -0.53
SMG6-210ENST00000572205 DDX10Q13206 875 aaKnown RBP11.74□□□□□ -0.53
SMG6-210ENST00000572205 SLC15A2Q16348 729 aa11.74□□□□□ -0.53
SMG6-210ENST00000572205 MTHFSDQ2M296 383 aaKnown RBP11.74□□□□□ -0.53
SMG6-210ENST00000572205 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
SMG6-210ENST00000572205 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
SMG6-210ENST00000572205 SGIP1Q9BQI5 828 aa11.74□□□□□ -0.53
SMG6-210ENST00000572205 PNPLA7Q6ZV29 1317 aa11.74□□□□□ -0.53
SMG6-210ENST00000572205 SCN7AQ01118 1682 aa11.74□□□□□ -0.53
SMG6-210ENST00000572205 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
SMG6-210ENST00000572205 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
SMG6-210ENST00000572205 SYTL4Q96C24 671 aaPredicted RBP11.73□□□□□ -0.53
SMG6-210ENST00000572205 DCAF5Q96JK2 942 aa11.73□□□□□ -0.53
SMG6-210ENST00000572205 PHACTR3Q96KR7 559 aa11.73□□□□□ -0.53
SMG6-210ENST00000572205 ATG3Q9NT62 314 aa11.73□□□□□ -0.53
SMG6-210ENST00000572205 ASAP1Q9ULH1 1129 aa11.73□□□□□ -0.53
SMG6-210ENST00000572205 MAP3K5Q99683 1374 aa11.72□□□□□ -0.53
SMG6-210ENST00000572205 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
SMG6-210ENST00000572205 ITPK1Q13572 414 aa11.72□□□□□ -0.53
SMG6-210ENST00000572205 PLEKHO1Q53GL0 409 aaPredicted RBP11.72□□□□□ -0.53
SMG6-210ENST00000572205 MPRIPQ6WCQ1 1025 aa11.72□□□□□ -0.53
SMG6-210ENST00000572205 ERVV-2B6SEH9 535 aa11.71□□□□□ -0.53
SMG6-210ENST00000572205 PTGER2P43116 358 aa11.71□□□□□ -0.53
SMG6-210ENST00000572205 AKAP4Q5JQC9 854 aa11.71□□□□□ -0.53
SMG6-210ENST00000572205 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.53
SMG6-210ENST00000572205 LINC00116Q8NCU8 138 aa11.7□□□□□ -0.54
SMG6-210ENST00000572205 PLEKHF1Q96S99 279 aa11.7□□□□□ -0.54
SMG6-210ENST00000572205 LGR6Q9HBX8 967 aa11.7□□□□□ -0.54
SMG6-210ENST00000572205 TMOD3Q9NYL9 352 aa11.7□□□□□ -0.54
SMG6-210ENST00000572205 CCNL1Q9UK58 526 aaPredicted RBP11.7□□□□□ -0.54
SMG6-210ENST00000572205 BRCA1P38398 1863 aaKnown RBP11.7□□□□□ -0.54
SMG6-210ENST00000572205 MYBBP1AQ9BQG0 1328 aaKnown RBP11.69□□□□□ -0.54
SMG6-210ENST00000572205 PRKAR2BP31323 418 aa11.69□□□□□ -0.54
SMG6-210ENST00000572205 PRKRIP1Q9H875 184 aaPredicted RBP11.69□□□□□ -0.54
SMG6-210ENST00000572205 NRXN2Q9P2S2 1712 aa11.69□□□□□ -0.54
SMG6-210ENST00000572205 LOC102724428A0A0B4J2F2 783 aa11.68□□□□□ -0.54
SMG6-210ENST00000572205 U2SURPO15042 1029 aaKnown RBP11.68□□□□□ -0.54
SMG6-210ENST00000572205 RNMTO43148 476 aaKnown RBP11.68□□□□□ -0.54
SMG6-210ENST00000572205 ECM2O94769 699 aaPredicted RBP11.68□□□□□ -0.54
SMG6-210ENST00000572205 HSP90AB1P08238 724 aaKnown RBP11.68□□□□□ -0.54
SMG6-210ENST00000572205 SIK1P57059 783 aa11.68□□□□□ -0.54
SMG6-210ENST00000572205 RALBP1Q15311 655 aa11.68□□□□□ -0.54
SMG6-210ENST00000572205 TPRNQ4KMQ1 711 aa11.68□□□□□ -0.54
SMG6-210ENST00000572205 NBPF14Q5TI25 921 aa11.68□□□□□ -0.54
SMG6-210ENST00000572205 PAXIP1Q6ZW49 1069 aaPredicted RBP11.68□□□□□ -0.54
SMG6-210ENST00000572205 SPOCK2Q92563 424 aa11.68□□□□□ -0.54
SMG6-210ENST00000572205 SLC52A2Q9HAB3 445 aa11.68□□□□□ -0.54
SMG6-210ENST00000572205 IL17REQ8NFR9 667 aa11.67□□□□□ -0.54
SMG6-210ENST00000572205 STK32BQ9NY57 414 aa11.67□□□□□ -0.54
SMG6-210ENST00000572205 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.67□□□□□ -0.54
SMG6-210ENST00000572205 AFDNP55196 1824 aaKnown RBP11.67□□□□□ -0.54
SMG6-210ENST00000572205 SMIM5Q71RC9 77 aa11.66□□□□□ -0.54
SMG6-210ENST00000572205 NFATC2IPQ8NCF5 419 aa11.66□□□□□ -0.54
SMG6-210ENST00000572205 SMARCC1Q92922 1105 aaPredicted RBP11.66□□□□□ -0.54
SMG6-210ENST00000572205 CFAP53Q96M91 514 aa11.66□□□□□ -0.54
SMG6-210ENST00000572205 FCHSD2O94868 740 aa11.65□□□□□ -0.54
SMG6-210ENST00000572205 ZBTB7AO95365 584 aa11.65□□□□□ -0.54
SMG6-210ENST00000572205 C1orf141Q5JVX7 400 aa11.65□□□□□ -0.54
SMG6-210ENST00000572205 COL23A1Q86Y22 540 aaPredicted RBP11.65□□□□□ -0.54
SMG6-210ENST00000572205 DLEC1Q9Y238 1755 aa11.64□□□□□ -0.55
SMG6-210ENST00000572205 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
SMG6-210ENST00000572205 U2AF1L5P0DN76 240 aaPredicted RBP11.64□□□□□ -0.55
SMG6-210ENST00000572205 U2AF1Q01081 240 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMG6-210ENST00000572205 GAS2L2Q8NHY3 880 aa11.64□□□□□ -0.55
SMG6-210ENST00000572205 CFAP44Q96MT7 982 aa11.64□□□□□ -0.55
SMG6-210ENST00000572205 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
SMG6-210ENST00000572205 CCDC184Q52MB2 194 aa11.63□□□□□ -0.55
SMG6-210ENST00000572205 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
SMG6-210ENST00000572205 MTFR1LQ9H019 292 aa11.63□□□□□ -0.55
SMG6-210ENST00000572205 ANKRD31Q8N7Z5 1873 aa11.62□□□□□ -0.55
SMG6-210ENST00000572205 GNAT3A8MTJ3 354 aa11.62□□□□□ -0.55
SMG6-210ENST00000572205 CABP4P57796 275 aa11.62□□□□□ -0.55
SMG6-210ENST00000572205 SLC39A6Q13433 755 aa11.62□□□□□ -0.55
SMG6-210ENST00000572205 SPON1Q9HCB6 807 aa11.62□□□□□ -0.55
SMG6-210ENST00000572205 HEG1Q9ULI3 1381 aa11.62□□□□□ -0.55
SMG6-210ENST00000572205 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
SMG6-210ENST00000572205 RGL2O15211 777 aa11.61□□□□□ -0.55
SMG6-210ENST00000572205 CAPN15O75808 1086 aa11.61□□□□□ -0.55
SMG6-210ENST00000572205 NUDCQ9Y266 331 aa11.61□□□□□ -0.55
SMG6-210ENST00000572205 N4BP2Q86UW6 1770 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms