RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 RTF1Q92541 710 aaKnown RBP21.43■■□□□ 1.02
LITAF-210ENST00000571976 LOC102724428A0A0B4J2F2 783 aa21.42■■□□□ 1.02
LITAF-210ENST00000571976 HTATSF1O43719 755 aaKnown RBP21.42■■□□□ 1.02
LITAF-210ENST00000571976 MRC1P22897 1456 aa21.42■■□□□ 1.02
LITAF-210ENST00000571976 KCNQ4P56696 695 aa21.42■■□□□ 1.02
LITAF-210ENST00000571976 SIK1P57059 783 aa21.42■■□□□ 1.02
LITAF-210ENST00000571976 SLC15A2Q16348 729 aa21.42■■□□□ 1.02
LITAF-210ENST00000571976 ADAMTS8Q9UP79 889 aa21.42■■□□□ 1.02
LITAF-210ENST00000571976 TEFQ10587 303 aa21.41■■□□□ 1.02
LITAF-210ENST00000571976 NFE2L2Q16236 605 aa21.4■■□□□ 1.02
LITAF-210ENST00000571976 PAPPAQ13219 1627 aa21.4■■□□□ 1.02
LITAF-210ENST00000571976 CEMIPQ8WUJ3 1361 aa21.39■■□□□ 1.02
LITAF-210ENST00000571976 VIRMAQ69YN4 1812 aaKnown RBP21.39■■□□□ 1.02
LITAF-210ENST00000571976 CCDC184Q52MB2 194 aa21.39■■□□□ 1.01
LITAF-210ENST00000571976 AKT1S1Q96B36 256 aa21.39■■□□□ 1.01
LITAF-210ENST00000571976 RUNDC1Q96C34 613 aa21.38■■□□□ 1.01
LITAF-210ENST00000571976 RBM42Q9BTD8 480 aaKnown RBP21.38■■□□□ 1.01
LITAF-210ENST00000571976 ATP6V1AP38606 617 aa21.37■■□□□ 1.01
LITAF-210ENST00000571976 ZNF827Q17R98 1081 aa21.37■■□□□ 1.01
LITAF-210ENST00000571976 MCM10Q7L590 875 aa21.37■■□□□ 1.01
LITAF-210ENST00000571976 MRS2Q9HD23 443 aa21.37■■□□□ 1.01
LITAF-210ENST00000571976 PTCD1O75127 700 aaKnown RBP21.36■■□□□ 1.01
LITAF-210ENST00000571976 CCDC146Q8IYE0 955 aa21.36■■□□□ 1.01
LITAF-210ENST00000571976 DCTN1Q14203 1278 aa21.35■■□□□ 1.01
LITAF-210ENST00000571976 TMPOP42166 694 aaKnown RBP21.34■■□□□ 1.01
LITAF-210ENST00000571976 SLC39A6Q13433 755 aa21.34■■□□□ 1.01
LITAF-210ENST00000571976 PNISRQ8TF01 805 aaKnown RBP21.34■■□□□ 1.01
LITAF-210ENST00000571976 TFCP2L1Q9NZI6 479 aa21.34■■□□□ 1.01
LITAF-210ENST00000571976 C5P01031 1676 aa21.34■■□□□ 1.01
LITAF-210ENST00000571976 RIPK4P57078 832 aa21.33■■□□□ 1.01
LITAF-210ENST00000571976 ITPK1Q13572 414 aa21.33■■□□□ 1.01
LITAF-210ENST00000571976 SLC4A9Q96Q91 983 aa21.33■■□□□ 1.01
LITAF-210ENST00000571976 ZNF831Q5JPB2 1677 aa21.33■■□□□ 1
LITAF-210ENST00000571976 TAF1LQ8IZX4 1826 aa21.32■■□□□ 1
LITAF-210ENST00000571976 TTC5Q8N0Z6 440 aa21.32■■□□□ 1
LITAF-210ENST00000571976 DLG5Q8TDM6 1919 aa21.31■■□□□ 1
LITAF-210ENST00000571976 SIPA1L3O60292 1781 aaPredicted RBP21.31■■□□□ 1
LITAF-210ENST00000571976 BTBD11A6QL63 1104 aa21.31■■□□□ 1
LITAF-210ENST00000571976 LMOD3Q0VAK6 560 aa21.31■■□□□ 1
LITAF-210ENST00000571976 ZNF790Q6PG37 636 aa21.31■■□□□ 1
LITAF-210ENST00000571976 LINC00116Q8NCU8 138 aa21.31■■□□□ 1
LITAF-210ENST00000571976 TAF7Q15545 349 aaPredicted RBP21.3■■□□□ 1
LITAF-210ENST00000571976 AK7Q96M32 723 aa21.3■■□□□ 1
LITAF-210ENST00000571976 C4BP0C0L5 1744 aa21.29■■□□□ 1
LITAF-210ENST00000571976 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
LITAF-210ENST00000571976 PNPLA7Q6ZV29 1317 aa21.29■■□□□ 1
LITAF-210ENST00000571976 VSIG10Q8N0Z9 540 aa21.28■■□□□ 1
LITAF-210ENST00000571976 FLAD1Q8NFF5 587 aa21.28■■□□□ 1
LITAF-210ENST00000571976 PDGFDQ9GZP0 370 aaPredicted RBP21.28■■□□□ 1
LITAF-210ENST00000571976 KCPQ6ZWJ8 1503 aa21.28■■□□□ 1
LITAF-210ENST00000571976 QSER1Q2KHR3 1735 aa21.27■■□□□ 1
LITAF-210ENST00000571976 NEUROD2Q15784 382 aa21.27■■□□□ 1
LITAF-210ENST00000571976 RC3H1Q5TC82 1133 aaKnown RBP21.27■■□□□ 1
LITAF-210ENST00000571976 CASZ1Q86V15 1759 aa21.26■□□□□ 0.99
LITAF-210ENST00000571976 ZNF496Q96IT1 587 aaPredicted RBP21.26■□□□□ 0.99
LITAF-210ENST00000571976 THUMPD2Q9BTF0 503 aaKnown RBP21.26■□□□□ 0.99
LITAF-210ENST00000571976 CNTNAP4Q9C0A0 1308 aa21.26■□□□□ 0.99
LITAF-210ENST00000571976 UBR2Q8IWV8 1755 aa21.25■□□□□ 0.99
LITAF-210ENST00000571976 APAF1O14727 1248 aa21.25■□□□□ 0.99
LITAF-210ENST00000571976 SLC16A10Q8TF71 515 aa21.25■□□□□ 0.99
LITAF-210ENST00000571976 FMNL2Q96PY5 1086 aa21.25■□□□□ 0.99
LITAF-210ENST00000571976 CICQ96RK0 1608 aaPredicted RBP21.25■□□□□ 0.99
LITAF-210ENST00000571976 GNPATO15228 680 aa21.24■□□□□ 0.99
LITAF-210ENST00000571976 SSFA2P28290 1259 aa21.24■□□□□ 0.99
LITAF-210ENST00000571976 DNAJC10Q8IXB1 793 aa21.24■□□□□ 0.99
LITAF-210ENST00000571976 SPON1Q9HCB6 807 aa21.24■□□□□ 0.99
LITAF-210ENST00000571976 TRIM35Q9UPQ4 493 aa21.24■□□□□ 0.99
LITAF-210ENST00000571976 COL5A3P25940 1745 aaPredicted RBP21.24■□□□□ 0.99
LITAF-210ENST00000571976 HEG1Q9ULI3 1381 aa21.23■□□□□ 0.99
LITAF-210ENST00000571976 TUBGCP6Q96RT7 1819 aa21.23■□□□□ 0.99
LITAF-210ENST00000571976 KCNQ3O43525 872 aa21.23■□□□□ 0.99
LITAF-210ENST00000571976 ZBTB7AO95365 584 aa21.23■□□□□ 0.99
LITAF-210ENST00000571976 COL23A1Q86Y22 540 aaPredicted RBP21.23■□□□□ 0.99
LITAF-210ENST00000571976 TEX13AQ9BXU3 409 aaPredicted RBP21.23■□□□□ 0.99
LITAF-210ENST00000571976 MTFR1LQ9H019 292 aa21.23■□□□□ 0.99
LITAF-210ENST00000571976 SRCAPQ6ZRS2 3230 aa21.23■□□□□ 0.99
LITAF-210ENST00000571976 TJP1Q07157 1748 aa21.22■□□□□ 0.99
LITAF-210ENST00000571976 MSH5O43196 834 aa21.22■□□□□ 0.99
LITAF-210ENST00000571976 CYP19A1P11511 503 aaPredicted RBP21.22■□□□□ 0.99
LITAF-210ENST00000571976 CRKLP46109 303 aaKnown RBP21.22■□□□□ 0.99
LITAF-210ENST00000571976 DIEXFQ68CQ4 756 aaKnown RBP21.22■□□□□ 0.99
LITAF-210ENST00000571976 MIS18AQ9NYP9 233 aa21.22■□□□□ 0.99
LITAF-210ENST00000571976 RTCBQ9Y3I0 505 aaKnown RBP21.22■□□□□ 0.99
LITAF-210ENST00000571976 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.21■□□□□ 0.99
LITAF-210ENST00000571976 RPS6KA4O75676 772 aa21.21■□□□□ 0.99
LITAF-210ENST00000571976 PHF14O94880 888 aa21.21■□□□□ 0.99
LITAF-210ENST00000571976 STARD3NLO95772 234 aa21.21■□□□□ 0.99
LITAF-210ENST00000571976 AMIGO3Q86WK7 504 aa21.21■□□□□ 0.99
LITAF-210ENST00000571976 LRP5O75197 1615 aa21.21■□□□□ 0.99
LITAF-210ENST00000571976 UBR3Q6ZT12 1888 aa21.2■□□□□ 0.98
LITAF-210ENST00000571976 BABAM1Q9NWV8 329 aa21.2■□□□□ 0.98
LITAF-210ENST00000571976 ATF5Q9Y2D1 282 aaPredicted RBP21.2■□□□□ 0.98
LITAF-210ENST00000571976 TRAPPC3LQ5T215 181 aa21.19■□□□□ 0.98
LITAF-210ENST00000571976 INTS5Q6P9B9 1019 aaKnown RBP21.19■□□□□ 0.98
LITAF-210ENST00000571976 FAM9BQ8IZU0 186 aa21.19■□□□□ 0.98
LITAF-210ENST00000571976 CCDC87Q9NVE4 849 aa21.19■□□□□ 0.98
LITAF-210ENST00000571976 CCER2I3L3R5 266 aa21.18■□□□□ 0.98
LITAF-210ENST00000571976 SNRPA1P09661 255 aaKnown RBP21.18■□□□□ 0.98
LITAF-210ENST00000571976 ADRA2BP18089 450 aa21.18■□□□□ 0.98
LITAF-210ENST00000571976 SMIM5Q71RC9 77 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms