RNA–Protein interactions for RNA: ENST00000571881.2

CLDN7-204, Transcript of claudin 7, humanhuman

TSL 3 BASIC

Gene CLDN7, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-204ENST00000571881 ATG3Q9NT62 314 aa24.39■■□□□ 1.49
CLDN7-204ENST00000571881 RNMTO43148 476 aaKnown RBP24.38■■□□□ 1.49
CLDN7-204ENST00000571881 PDGFDQ9GZP0 370 aaPredicted RBP24.38■■□□□ 1.49
CLDN7-204ENST00000571881 LOC102724428A0A0B4J2F2 783 aa24.37■■□□□ 1.49
CLDN7-204ENST00000571881 MSH5O43196 834 aa24.37■■□□□ 1.49
CLDN7-204ENST00000571881 ZBTB7AO95365 584 aa24.37■■□□□ 1.49
CLDN7-204ENST00000571881 SIK1P57059 783 aa24.37■■□□□ 1.49
CLDN7-204ENST00000571881 PHACTR3Q96KR7 559 aa24.37■■□□□ 1.49
CLDN7-204ENST00000571881 ADAMTS7Q9UKP4 1686 aa24.37■■□□□ 1.49
CLDN7-204ENST00000571881 GNAT3A8MTJ3 354 aa24.36■■□□□ 1.49
CLDN7-204ENST00000571881 FCHSD2O94868 740 aa24.36■■□□□ 1.49
CLDN7-204ENST00000571881 ATP6V1AP38606 617 aa24.36■■□□□ 1.49
CLDN7-204ENST00000571881 AKT1S1Q96B36 256 aa24.36■■□□□ 1.49
CLDN7-204ENST00000571881 AK7Q96M32 723 aa24.35■■□□□ 1.49
CLDN7-204ENST00000571881 PRKRIP1Q9H875 184 aaPredicted RBP24.35■■□□□ 1.49
CLDN7-204ENST00000571881 SLC52A2Q9HAB3 445 aa24.35■■□□□ 1.49
CLDN7-204ENST00000571881 SPON1Q9HCB6 807 aa24.35■■□□□ 1.49
CLDN7-204ENST00000571881 UBR3Q6ZT12 1888 aa24.34■■□□□ 1.49
CLDN7-204ENST00000571881 SIPA1L3O60292 1781 aaPredicted RBP24.34■■□□□ 1.49
CLDN7-204ENST00000571881 MRC1P22897 1456 aa24.34■■□□□ 1.49
CLDN7-204ENST00000571881 PTCD1O75127 700 aaKnown RBP24.34■■□□□ 1.49
CLDN7-204ENST00000571881 PPP1R1BQ9UD71 204 aaPredicted RBP24.34■■□□□ 1.49
CLDN7-204ENST00000571881 COL5A3P25940 1745 aaPredicted RBP24.33■■□□□ 1.49
CLDN7-204ENST00000571881 TEFQ10587 303 aa24.33■■□□□ 1.49
CLDN7-204ENST00000571881 ATF5Q9Y2D1 282 aaPredicted RBP24.33■■□□□ 1.49
CLDN7-204ENST00000571881 MAPK8IP3Q9UPT6 1336 aa24.33■■□□□ 1.48
CLDN7-204ENST00000571881 HMGB2P26583 209 aaKnown RBP24.32■■□□□ 1.48
CLDN7-204ENST00000571881 RTF1Q92541 710 aaKnown RBP24.32■■□□□ 1.48
CLDN7-204ENST00000571881 ZNF831Q5JPB2 1677 aa24.31■■□□□ 1.48
CLDN7-204ENST00000571881 WDR43Q15061 677 aaKnown RBP eCLIP24.31■■□□□ 1.48
CLDN7-204ENST00000571881 PNPLA7Q6ZV29 1317 aa24.31■■□□□ 1.48
CLDN7-204ENST00000571881 TJP1Q07157 1748 aa24.3■■□□□ 1.48
CLDN7-204ENST00000571881 LINC00116Q8NCU8 138 aa24.3■■□□□ 1.48
CLDN7-204ENST00000571881 PNNQ9H307 717 aaKnown RBP24.3■■□□□ 1.48
CLDN7-204ENST00000571881 PHF14O94880 888 aa24.29■■□□□ 1.48
CLDN7-204ENST00000571881 SLC39A6Q13433 755 aa24.29■■□□□ 1.48
CLDN7-204ENST00000571881 ITPK1Q13572 414 aa24.29■■□□□ 1.48
CLDN7-204ENST00000571881 UBR2Q8IWV8 1755 aa24.28■■□□□ 1.48
CLDN7-204ENST00000571881 MTFR1LQ9H019 292 aa24.27■■□□□ 1.48
CLDN7-204ENST00000571881 GNPATO15228 680 aa24.26■■□□□ 1.47
CLDN7-204ENST00000571881 MCM10Q7L590 875 aa24.26■■□□□ 1.47
CLDN7-204ENST00000571881 TTC5Q8N0Z6 440 aa24.26■■□□□ 1.47
CLDN7-204ENST00000571881 IL17REQ8NFR9 667 aa24.26■■□□□ 1.47
CLDN7-204ENST00000571881 ANP32CO43423 234 aa24.25■■□□□ 1.47
CLDN7-204ENST00000571881 MYH14Q7Z406 1995 aaKnown RBP24.25■■□□□ 1.47
CLDN7-204ENST00000571881 DCTN1Q14203 1278 aa24.24■■□□□ 1.47
CLDN7-204ENST00000571881 SMIM5Q71RC9 77 aa24.24■■□□□ 1.47
CLDN7-204ENST00000571881 SLC4A9Q96Q91 983 aa24.24■■□□□ 1.47
CLDN7-204ENST00000571881 COL23A1Q86Y22 540 aaPredicted RBP24.23■■□□□ 1.47
CLDN7-204ENST00000571881 CCDC146Q8IYE0 955 aa24.23■■□□□ 1.47
CLDN7-204ENST00000571881 KCPQ6ZWJ8 1503 aa24.22■■□□□ 1.47
CLDN7-204ENST00000571881 PLEKHF1Q96S99 279 aa24.22■■□□□ 1.47
CLDN7-204ENST00000571881 CICQ96RK0 1608 aaPredicted RBP24.21■■□□□ 1.47
CLDN7-204ENST00000571881 NFE2L2Q16236 605 aa24.21■■□□□ 1.47
CLDN7-204ENST00000571881 MSL1Q68DK7 614 aa24.21■■□□□ 1.47
CLDN7-204ENST00000571881 FLAD1Q8NFF5 587 aa24.21■■□□□ 1.47
CLDN7-204ENST00000571881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.2■■□□□ 1.46
CLDN7-204ENST00000571881 BTBD11A6QL63 1104 aa24.2■■□□□ 1.46
CLDN7-204ENST00000571881 SLC16A10Q8TF71 515 aa24.2■■□□□ 1.46
CLDN7-204ENST00000571881 CEMIPQ8WUJ3 1361 aa24.19■■□□□ 1.46
CLDN7-204ENST00000571881 C4AP0C0L4 1744 aa24.19■■□□□ 1.46
CLDN7-204ENST00000571881 KLHL34Q8N239 644 aa24.19■■□□□ 1.46
CLDN7-204ENST00000571881 POLD1P28340 1107 aa24.18■■□□□ 1.46
CLDN7-204ENST00000571881 DNAJC10Q8IXB1 793 aa24.18■■□□□ 1.46
CLDN7-204ENST00000571881 RTCBQ9Y3I0 505 aaKnown RBP24.18■■□□□ 1.46
CLDN7-204ENST00000571881 SSFA2P28290 1259 aa24.17■■□□□ 1.46
CLDN7-204ENST00000571881 CRKLP46109 303 aaKnown RBP24.17■■□□□ 1.46
CLDN7-204ENST00000571881 AMIGO3Q86WK7 504 aa24.17■■□□□ 1.46
CLDN7-204ENST00000571881 COL24A1Q17RW2 1714 aa24.17■■□□□ 1.46
CLDN7-204ENST00000571881 CNTNAP4Q9C0A0 1308 aa24.16■■□□□ 1.46
CLDN7-204ENST00000571881 HTATSF1O43719 755 aaKnown RBP24.16■■□□□ 1.46
CLDN7-204ENST00000571881 PTGER2P43116 358 aa24.16■■□□□ 1.46
CLDN7-204ENST00000571881 NEUROD2Q15784 382 aa24.16■■□□□ 1.46
CLDN7-204ENST00000571881 ZNF790Q6PG37 636 aa24.16■■□□□ 1.46
CLDN7-204ENST00000571881 RRP7AQ9Y3A4 280 aaKnown RBP24.16■■□□□ 1.46
CLDN7-204ENST00000571881 ADAMTS8Q9UP79 889 aa24.15■■□□□ 1.46
CLDN7-204ENST00000571881 RIPK4P57078 832 aa24.14■■□□□ 1.45
CLDN7-204ENST00000571881 THUMPD2Q9BTF0 503 aaKnown RBP24.14■■□□□ 1.45
CLDN7-204ENST00000571881 KDM3BQ7LBC6 1761 aa24.14■■□□□ 1.45
CLDN7-204ENST00000571881 TRAPPC3LQ5T215 181 aa24.13■■□□□ 1.45
CLDN7-204ENST00000571881 RC3H1Q5TC82 1133 aaKnown RBP24.13■■□□□ 1.45
CLDN7-204ENST00000571881 RUNDC1Q96C34 613 aa24.13■■□□□ 1.45
CLDN7-204ENST00000571881 ZNF496Q96IT1 587 aaPredicted RBP24.13■■□□□ 1.45
CLDN7-204ENST00000571881 FMNL2Q96PY5 1086 aa24.13■■□□□ 1.45
CLDN7-204ENST00000571881 ARXQ96QS3 562 aa24.13■■□□□ 1.45
CLDN7-204ENST00000571881 KCNQ3O43525 872 aa24.12■■□□□ 1.45
CLDN7-204ENST00000571881 HEG1Q9ULI3 1381 aa24.12■■□□□ 1.45
CLDN7-204ENST00000571881 RPS6KA4O75676 772 aa24.11■■□□□ 1.45
CLDN7-204ENST00000571881 TMPOP42166 694 aaKnown RBP24.11■■□□□ 1.45
CLDN7-204ENST00000571881 CCDC184Q52MB2 194 aa24.11■■□□□ 1.45
CLDN7-204ENST00000571881 MRS2Q9HD23 443 aa24.11■■□□□ 1.45
CLDN7-204ENST00000571881 CCDC87Q9NVE4 849 aa24.11■■□□□ 1.45
CLDN7-204ENST00000571881 RFC4P35249 363 aa24.1■■□□□ 1.45
CLDN7-204ENST00000571881 LMOD3Q0VAK6 560 aa24.1■■□□□ 1.45
CLDN7-204ENST00000571881 TAF7Q15545 349 aaPredicted RBP24.1■■□□□ 1.45
CLDN7-204ENST00000571881 MIS18AQ9NYP9 233 aa24.1■■□□□ 1.45
CLDN7-204ENST00000571881 LAMB4A4D0S4 1761 aa24.09■■□□□ 1.45
CLDN7-204ENST00000571881 VSIG10Q8N0Z9 540 aa24.09■■□□□ 1.45
CLDN7-204ENST00000571881 ZNF330Q9Y3S2 320 aaPredicted RBP24.09■■□□□ 1.45
CLDN7-204ENST00000571881 SRCAPQ6ZRS2 3230 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms