RNA–Protein interactions for RNA: ENST00000571079.1

FXR2-202, Transcript of FMR1 autosomal homolog 2, humanhuman

TSL 4

Gene FXR2, Length 462 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-202ENST00000571079 ITGB4P16144 1822 aa12.79□□□□□ -0.36
FXR2-202ENST00000571079 SSFA2P28290 1259 aa12.79□□□□□ -0.36
FXR2-202ENST00000571079 GRM1Q13255 1194 aa12.79□□□□□ -0.36
FXR2-202ENST00000571079 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.79□□□□□ -0.36
FXR2-202ENST00000571079 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.36
FXR2-202ENST00000571079 PRPF38BQ5VTL8 546 aaKnown RBP12.77□□□□□ -0.37
FXR2-202ENST00000571079 USHBP1Q8N6Y0 703 aa12.77□□□□□ -0.37
FXR2-202ENST00000571079 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
FXR2-202ENST00000571079 TMF1P82094 1093 aa12.76□□□□□ -0.37
FXR2-202ENST00000571079 ITPK1Q13572 414 aa12.76□□□□□ -0.37
FXR2-202ENST00000571079 NME9Q86XW9 330 aa12.76□□□□□ -0.37
FXR2-202ENST00000571079 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
FXR2-202ENST00000571079 MAP2P11137 1827 aaKnown RBP12.76□□□□□ -0.37
FXR2-202ENST00000571079 TMEM88BA6NKF7 163 aa12.75□□□□□ -0.37
FXR2-202ENST00000571079 LMNB1P20700 586 aa12.75□□□□□ -0.37
FXR2-202ENST00000571079 NSD3Q9BZ95 1437 aa12.75□□□□□ -0.37
FXR2-202ENST00000571079 WDR33Q9C0J8 1336 aaKnown RBP12.75□□□□□ -0.37
FXR2-202ENST00000571079 KDM6AO15550 1401 aaPredicted RBP12.74□□□□□ -0.37
FXR2-202ENST00000571079 PASKQ96RG2 1323 aa12.74□□□□□ -0.37
FXR2-202ENST00000571079 DGKZQ13574 1117 aa12.74□□□□□ -0.37
FXR2-202ENST00000571079 MAP2K1Q02750 393 aaPredicted RBP12.73□□□□□ -0.37
FXR2-202ENST00000571079 DEFB115Q30KQ5 88 aa12.73□□□□□ -0.37
FXR2-202ENST00000571079 PAXIP1Q6ZW49 1069 aaPredicted RBP12.73□□□□□ -0.37
FXR2-202ENST00000571079 NBPF1Q3BBV0 1214 aa12.72□□□□□ -0.37
FXR2-202ENST00000571079 LTBP1Q14766 1721 aa12.71□□□□□ -0.37
FXR2-202ENST00000571079 KTN1Q86UP2 1357 aaKnown RBP12.71□□□□□ -0.37
FXR2-202ENST00000571079 TTC21AQ8NDW8 1320 aa12.71□□□□□ -0.37
FXR2-202ENST00000571079 CENPJQ9HC77 1338 aaPredicted RBP12.71□□□□□ -0.37
FXR2-202ENST00000571079 LOC102724428A0A0B4J2F2 783 aa12.71□□□□□ -0.37
FXR2-202ENST00000571079 GYS1P13807 737 aa12.71□□□□□ -0.37
FXR2-202ENST00000571079 FBLN1P23142 703 aa12.71□□□□□ -0.37
FXR2-202ENST00000571079 SIK1P57059 783 aa12.71□□□□□ -0.37
FXR2-202ENST00000571079 NLGN1Q8N2Q7 840 aa12.71□□□□□ -0.37
FXR2-202ENST00000571079 ABT1Q9ULW3 272 aaKnown RBP12.71□□□□□ -0.37
FXR2-202ENST00000571079 ZC3H4Q9UPT8 1303 aaKnown RBP12.7□□□□□ -0.38
FXR2-202ENST00000571079 DDNO94850 711 aaPredicted RBP12.7□□□□□ -0.38
FXR2-202ENST00000571079 EAPPQ56P03 285 aaPredicted RBP12.7□□□□□ -0.38
FXR2-202ENST00000571079 TRAPPC3LQ5T215 181 aa12.7□□□□□ -0.38
FXR2-202ENST00000571079 PIGBQ92521 554 aa12.7□□□□□ -0.38
FXR2-202ENST00000571079 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
FXR2-202ENST00000571079 NFKBIEO00221 500 aa12.69□□□□□ -0.38
FXR2-202ENST00000571079 ATP6V1AP38606 617 aa12.69□□□□□ -0.38
FXR2-202ENST00000571079 DDR1Q08345 913 aa12.69□□□□□ -0.38
FXR2-202ENST00000571079 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
FXR2-202ENST00000571079 BEGAINQ9BUH8 593 aa12.69□□□□□ -0.38
FXR2-202ENST00000571079 RASSF10A6NK89 507 aa12.68□□□□□ -0.38
FXR2-202ENST00000571079 AOC2O75106 756 aa12.68□□□□□ -0.38
FXR2-202ENST00000571079 ITGBL1O95965 494 aaPredicted RBP12.68□□□□□ -0.38
FXR2-202ENST00000571079 FMR1Q06787 632 aaKnown RBP eCLIP12.68□□□□□ -0.38
FXR2-202ENST00000571079 CYP4F22Q6NT55 531 aa12.68□□□□□ -0.38
FXR2-202ENST00000571079 SMARCC1Q92922 1105 aaPredicted RBP12.68□□□□□ -0.38
FXR2-202ENST00000571079 SRP68Q9UHB9 627 aaKnown RBP12.68□□□□□ -0.38
FXR2-202ENST00000571079 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
FXR2-202ENST00000571079 MON2Q7Z3U7 1717 aa12.68□□□□□ -0.38
FXR2-202ENST00000571079 IP6K1Q92551 441 aa12.67□□□□□ -0.38
FXR2-202ENST00000571079 ASAP1Q9ULH1 1129 aa12.67□□□□□ -0.38
FXR2-202ENST00000571079 RTCBQ9Y3I0 505 aaKnown RBP12.67□□□□□ -0.38
FXR2-202ENST00000571079 DICER1Q9UPY3 1922 aaKnown RBP12.66□□□□□ -0.38
FXR2-202ENST00000571079 A0A0C4DFX4 3053 aa12.66□□□□□ -0.38
FXR2-202ENST00000571079 DLL1O00548 723 aa12.66□□□□□ -0.38
FXR2-202ENST00000571079 RFC4P35249 363 aa12.66□□□□□ -0.38
FXR2-202ENST00000571079 MAP1SQ66K74 1059 aaPredicted RBP12.66□□□□□ -0.38
FXR2-202ENST00000571079 CAPNS2Q96L46 248 aa12.66□□□□□ -0.38
FXR2-202ENST00000571079 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
FXR2-202ENST00000571079 CYP27B1O15528 508 aa12.65□□□□□ -0.38
FXR2-202ENST00000571079 FKBP8Q14318 412 aa12.65□□□□□ -0.38
FXR2-202ENST00000571079 ERFEQ4G0M1 354 aa12.65□□□□□ -0.38
FXR2-202ENST00000571079 NBPF6Q5VWK0 638 aa12.65□□□□□ -0.38
FXR2-202ENST00000571079 LDHDQ86WU2 507 aa12.65□□□□□ -0.38
FXR2-202ENST00000571079 NBPF4Q96M43 638 aa12.65□□□□□ -0.38
FXR2-202ENST00000571079 THSD7BQ9C0I4 1608 aa12.65□□□□□ -0.38
FXR2-202ENST00000571079 GPR101Q96P66 508 aaPredicted RBP12.64□□□□□ -0.39
FXR2-202ENST00000571079 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
FXR2-202ENST00000571079 SZT2Q5T011 3432 aa12.63□□□□□ -0.39
FXR2-202ENST00000571079 HABP4Q5JVS0 413 aaKnown RBP12.63□□□□□ -0.39
FXR2-202ENST00000571079 AFDNP55196 1824 aaKnown RBP12.62□□□□□ -0.39
FXR2-202ENST00000571079 MYH14Q7Z406 1995 aaKnown RBP12.62□□□□□ -0.39
FXR2-202ENST00000571079 RAPGEF4Q8WZA2 1011 aa12.62□□□□□ -0.39
FXR2-202ENST00000571079 TAF1DQ9H5J8 278 aaPredicted RBP12.62□□□□□ -0.39
FXR2-202ENST00000571079 PCDH11XQ9BZA7 1347 aa12.62□□□□□ -0.39
FXR2-202ENST00000571079 PCDH11YQ9BZA8 1340 aa12.62□□□□□ -0.39
FXR2-202ENST00000571079 TATP17735 454 aaPredicted RBP12.61□□□□□ -0.39
FXR2-202ENST00000571079 HMGB2P26583 209 aaKnown RBP12.61□□□□□ -0.39
FXR2-202ENST00000571079 HOXC9P31274 260 aa12.61□□□□□ -0.39
FXR2-202ENST00000571079 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
FXR2-202ENST00000571079 DLEC1Q9Y238 1755 aa12.61□□□□□ -0.39
FXR2-202ENST00000571079 CACNA1SQ13698 1873 aa12.6□□□□□ -0.39
FXR2-202ENST00000571079 AMPHP49418 695 aa12.6□□□□□ -0.39
FXR2-202ENST00000571079 CNTROBQ8N137 903 aa12.6□□□□□ -0.39
FXR2-202ENST00000571079 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
FXR2-202ENST00000571079 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
FXR2-202ENST00000571079 EVC2Q86UK5 1308 aa12.6□□□□□ -0.39
FXR2-202ENST00000571079 SBNO2Q9Y2G9 1366 aa12.59□□□□□ -0.39
FXR2-202ENST00000571079 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
FXR2-202ENST00000571079 SCN4AP35499 1836 aa12.58□□□□□ -0.4
FXR2-202ENST00000571079 POLRMTO00411 1230 aaKnown RBP12.58□□□□□ -0.4
FXR2-202ENST00000571079 C21orf2O43822 256 aa12.58□□□□□ -0.4
FXR2-202ENST00000571079 FER1L6Q2WGJ9 1857 aa12.58□□□□□ -0.4
FXR2-202ENST00000571079 C2CD5Q86YS7 1000 aa12.58□□□□□ -0.4
FXR2-202ENST00000571079 TTLL6Q8N841 843 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms