RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 SMC4Q9NTJ3 1288 aa24.93■■□□□ 1.58
SPNS2-203ENST00000570979 COG6Q9Y2V7 657 aa24.93■■□□□ 1.58
SPNS2-203ENST00000570979 DZIP1LQ8IYY4 767 aaKnown RBP24.93■■□□□ 1.58
SPNS2-203ENST00000570979 TNS2Q63HR2 1409 aa24.92■■□□□ 1.58
SPNS2-203ENST00000570979 AMPHP49418 695 aa24.92■■□□□ 1.58
SPNS2-203ENST00000570979 PANK1Q8TE04 598 aa24.92■■□□□ 1.58
SPNS2-203ENST00000570979 RREB1Q92766 1687 aa24.92■■□□□ 1.58
SPNS2-203ENST00000570979 R3HDM1Q15032 1099 aaKnown RBP24.91■■□□□ 1.58
SPNS2-203ENST00000570979 KIF24Q5T7B8 1368 aa24.91■■□□□ 1.58
SPNS2-203ENST00000570979 BCL9O00512 1426 aa24.9■■□□□ 1.58
SPNS2-203ENST00000570979 HMOX1P09601 288 aa24.9■■□□□ 1.58
SPNS2-203ENST00000570979 IL2RBP14784 551 aa24.9■■□□□ 1.58
SPNS2-203ENST00000570979 TSR2Q969E8 191 aaKnown RBP24.9■■□□□ 1.58
SPNS2-203ENST00000570979 MVPQ14764 893 aaKnown RBP24.9■■□□□ 1.58
SPNS2-203ENST00000570979 RWDD1Q9H446 243 aaPredicted RBP24.9■■□□□ 1.58
SPNS2-203ENST00000570979 RGPD2P0DJD1 1756 aa24.9■■□□□ 1.58
SPNS2-203ENST00000570979 NUP188Q5SRE5 1749 aa24.89■■□□□ 1.57
SPNS2-203ENST00000570979 DDX19BQ9UMR2 479 aa24.89■■□□□ 1.57
SPNS2-203ENST00000570979 BCL11BQ9C0K0 894 aaPredicted RBP24.88■■□□□ 1.57
SPNS2-203ENST00000570979 ATF7IPQ6VMQ6 1270 aa24.87■■□□□ 1.57
SPNS2-203ENST00000570979 FAM208AQ9UK61 1670 aaKnown RBP24.86■■□□□ 1.57
SPNS2-203ENST00000570979 PHACTR3Q96KR7 559 aa24.86■■□□□ 1.57
SPNS2-203ENST00000570979 IPO9Q96P70 1041 aaKnown RBP24.86■■□□□ 1.57
SPNS2-203ENST00000570979 CFAP44Q96MT7 982 aa24.85■■□□□ 1.57
SPNS2-203ENST00000570979 RTL1A6NKG5 1358 aa24.85■■□□□ 1.57
SPNS2-203ENST00000570979 KCNQ2O43526 872 aa24.85■■□□□ 1.57
SPNS2-203ENST00000570979 EIF4A2Q14240 407 aaKnown RBP24.85■■□□□ 1.57
SPNS2-203ENST00000570979 SSH1Q8WYL5 1049 aa24.85■■□□□ 1.57
SPNS2-203ENST00000570979 ARHGAP45Q92619 1136 aa24.85■■□□□ 1.57
SPNS2-203ENST00000570979 ZNF853P0CG23 659 aa24.84■■□□□ 1.57
SPNS2-203ENST00000570979 FAM161AQ3B820 660 aa24.84■■□□□ 1.57
SPNS2-203ENST00000570979 FLT4P35916 1363 aa24.84■■□□□ 1.57
SPNS2-203ENST00000570979 PLSCR1O15162 318 aa24.82■■□□□ 1.56
SPNS2-203ENST00000570979 BCL2L13Q9BXK5 485 aa24.82■■□□□ 1.56
SPNS2-203ENST00000570979 HSP90AB2PQ58FF8 381 aa24.82■■□□□ 1.56
SPNS2-203ENST00000570979 ACSBG1Q96GR2 724 aa24.82■■□□□ 1.56
SPNS2-203ENST00000570979 NBPF6Q5VWK0 638 aa24.81■■□□□ 1.56
SPNS2-203ENST00000570979 PROM2Q8N271 834 aa24.81■■□□□ 1.56
SPNS2-203ENST00000570979 NBPF4Q96M43 638 aa24.81■■□□□ 1.56
SPNS2-203ENST00000570979 RGPD3A6NKT7 1758 aaPredicted RBP24.8■■□□□ 1.56
SPNS2-203ENST00000570979 RGPD4Q7Z3J3 1758 aa24.8■■□□□ 1.56
SPNS2-203ENST00000570979 LRP5O75197 1615 aa24.8■■□□□ 1.56
SPNS2-203ENST00000570979 SULT6B1Q6IMI4 303 aa24.8■■□□□ 1.56
SPNS2-203ENST00000570979 USHBP1Q8N6Y0 703 aa24.8■■□□□ 1.56
SPNS2-203ENST00000570979 DDRGK1Q96HY6 314 aa24.8■■□□□ 1.56
SPNS2-203ENST00000570979 LAS1LQ9Y4W2 734 aaKnown RBP24.79■■□□□ 1.56
SPNS2-203ENST00000570979 MEGF6O75095 1541 aa24.78■■□□□ 1.56
SPNS2-203ENST00000570979 RLBP1P12271 317 aa24.78■■□□□ 1.56
SPNS2-203ENST00000570979 TRIM27P14373 513 aa24.78■■□□□ 1.56
SPNS2-203ENST00000570979 ZBTB47Q9UFB7 747 aaPredicted RBP24.78■■□□□ 1.56
SPNS2-203ENST00000570979 NOB1Q9ULX3 412 aaKnown RBP24.78■■□□□ 1.56
SPNS2-203ENST00000570979 NOP58Q9Y2X3 529 aaKnown RBP24.78■■□□□ 1.56
SPNS2-203ENST00000570979 NHSQ6T4R5 1651 aa24.78■■□□□ 1.56
SPNS2-203ENST00000570979 KAT6BQ8WYB5 2073 aa24.78■■□□□ 1.56
SPNS2-203ENST00000570979 IGHDP01880 384 aa24.77■■□□□ 1.56
SPNS2-203ENST00000570979 DDX54Q8TDD1 881 aaKnown RBP24.77■■□□□ 1.56
SPNS2-203ENST00000570979 VAMP4O75379 141 aa24.76■■□□□ 1.55
SPNS2-203ENST00000570979 ANO8Q9HCE9 1232 aaPredicted RBP24.76■■□□□ 1.55
SPNS2-203ENST00000570979 DLG5Q8TDM6 1919 aa24.75■■□□□ 1.55
SPNS2-203ENST00000570979 NBPF14Q5TI25 921 aa24.75■■□□□ 1.55
SPNS2-203ENST00000570979 SHANK3Q9BYB0 1731 aa24.75■■□□□ 1.55
SPNS2-203ENST00000570979 HTATSF1O43719 755 aaKnown RBP24.74■■□□□ 1.55
SPNS2-203ENST00000570979 HDAC1Q13547 482 aaPredicted RBP24.74■■□□□ 1.55
SPNS2-203ENST00000570979 MBIPQ9NS73 344 aa24.74■■□□□ 1.55
SPNS2-203ENST00000570979 ITPRIPQ8IWB1 547 aa24.73■■□□□ 1.55
SPNS2-203ENST00000570979 TXNRD1Q16881 649 aa24.72■■□□□ 1.55
SPNS2-203ENST00000570979 GAS2L2Q8NHY3 880 aa24.72■■□□□ 1.55
SPNS2-203ENST00000570979 KDRP35968 1356 aa24.72■■□□□ 1.55
SPNS2-203ENST00000570979 TWISTNBQ3B726 338 aaPredicted RBP24.72■■□□□ 1.55
SPNS2-203ENST00000570979 ZCRB1Q8TBF4 217 aaKnown RBP24.72■■□□□ 1.55
SPNS2-203ENST00000570979 API5Q9BZZ5 524 aaKnown RBP24.72■■□□□ 1.55
SPNS2-203ENST00000570979 PCDHB15Q9Y5E8 787 aa24.72■■□□□ 1.55
SPNS2-203ENST00000570979 BTAF1O14981 1849 aa24.72■■□□□ 1.55
SPNS2-203ENST00000570979 RGS3P49796 1198 aa24.71■■□□□ 1.55
SPNS2-203ENST00000570979 RTF1Q92541 710 aaKnown RBP24.7■■□□□ 1.55
SPNS2-203ENST00000570979 MRPL50Q8N5N7 158 aaKnown RBP24.7■■□□□ 1.54
SPNS2-203ENST00000570979 IGSF1Q8N6C5 1336 aa24.69■■□□□ 1.54
SPNS2-203ENST00000570979 CHL1O00533 1208 aa24.68■■□□□ 1.54
SPNS2-203ENST00000570979 DEKP35659 375 aaKnown RBP24.68■■□□□ 1.54
SPNS2-203ENST00000570979 RAPGEF4Q8WZA2 1011 aa24.67■■□□□ 1.54
SPNS2-203ENST00000570979 ZBTB40Q9NUA8 1239 aa24.67■■□□□ 1.54
SPNS2-203ENST00000570979 AEBP1Q8IUX7 1158 aa24.66■■□□□ 1.54
SPNS2-203ENST00000570979 TMEM57Q8N5G2 664 aa24.66■■□□□ 1.54
SPNS2-203ENST00000570979 TNNQ9UQP3 1299 aa24.66■■□□□ 1.54
SPNS2-203ENST00000570979 THUMPD2Q9BTF0 503 aaKnown RBP24.65■■□□□ 1.54
SPNS2-203ENST00000570979 PDGFDQ9GZP0 370 aaPredicted RBP24.65■■□□□ 1.54
SPNS2-203ENST00000570979 DOT1LQ8TEK3 1739 aa24.65■■□□□ 1.54
SPNS2-203ENST00000570979 TATP17735 454 aaPredicted RBP24.65■■□□□ 1.54
SPNS2-203ENST00000570979 PRIM1P49642 420 aaKnown RBP24.65■■□□□ 1.54
SPNS2-203ENST00000570979 C8orf34Q49A92 452 aa24.65■■□□□ 1.54
SPNS2-203ENST00000570979 NPM2Q86SE8 214 aaKnown RBP24.64■■□□□ 1.53
SPNS2-203ENST00000570979 NCAPD2Q15021 1401 aa24.63■■□□□ 1.53
SPNS2-203ENST00000570979 SOS1Q07889 1333 aaPredicted RBP24.63■■□□□ 1.53
SPNS2-203ENST00000570979 BABAM1Q9NWV8 329 aa24.63■■□□□ 1.53
SPNS2-203ENST00000570979 EYA1Q99502 592 aa24.62■■□□□ 1.53
SPNS2-203ENST00000570979 SYTL4Q96C24 671 aaPredicted RBP24.62■■□□□ 1.53
SPNS2-203ENST00000570979 LRRC4BQ9NT99 713 aa24.62■■□□□ 1.53
SPNS2-203ENST00000570979 PDZRN3Q9UPQ7 1066 aa24.62■■□□□ 1.53
SPNS2-203ENST00000570979 CASZ1Q86V15 1759 aa24.61■■□□□ 1.53
SPNS2-203ENST00000570979 SMC5Q8IY18 1101 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms