RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 ANKRD36BQ8N2N9 1353 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 CGNL1Q0VF96 1302 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 APAF1O14727 1248 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 PLIN1O60240 522 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 FAM69CQ0P6D2 419 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 TMEM164Q5U3C3 297 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 NUTM2DQ5VT03 806 aaPredicted RBP10.14□□□□□ -0.79
TCF4-246ENST00000570287 NPAS4Q8IUM7 802 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 CCDC146Q8IYE0 955 aa10.14□□□□□ -0.79
TCF4-246ENST00000570287 RRAGDQ9NQL2 400 aaPredicted RBP10.14□□□□□ -0.79
TCF4-246ENST00000570287 AGLP35573 1532 aa10.13□□□□□ -0.79
TCF4-246ENST00000570287 NINLQ9Y2I6 1382 aa10.13□□□□□ -0.79
TCF4-246ENST00000570287 PRR29P0C7W0 189 aa10.13□□□□□ -0.79
TCF4-246ENST00000570287 ZMIZ1Q9ULJ6 1067 aa10.13□□□□□ -0.79
TCF4-246ENST00000570287 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.13□□□□□ -0.79
TCF4-246ENST00000570287 CRBNQ96SW2 442 aa10.13□□□□□ -0.79
TCF4-246ENST00000570287 SHPRHQ149N8 1683 aa10.13□□□□□ -0.79
TCF4-246ENST00000570287 C7P10643 843 aa10.12□□□□□ -0.79
TCF4-246ENST00000570287 RBM46Q8TBY0 533 aaKnown RBP10.12□□□□□ -0.79
TCF4-246ENST00000570287 NKTRP30414 1462 aaKnown RBP10.12□□□□□ -0.79
TCF4-246ENST00000570287 VIRMAQ69YN4 1812 aaKnown RBP10.11□□□□□ -0.79
TCF4-246ENST00000570287 PEX14O75381 377 aa10.1□□□□□ -0.79
TCF4-246ENST00000570287 HMX1Q9NP08 348 aaPredicted RBP10.1□□□□□ -0.79
TCF4-246ENST00000570287 PTPRMP28827 1452 aa10.1□□□□□ -0.79
TCF4-246ENST00000570287 AP1G2O75843 785 aa10.1□□□□□ -0.79
TCF4-246ENST00000570287 FRAT2O75474 233 aaPredicted RBP10.1□□□□□ -0.79
TCF4-246ENST00000570287 CFAP53Q96M91 514 aa10.1□□□□□ -0.79
TCF4-246ENST00000570287 CLTCQ00610 1675 aaKnown RBP10.09□□□□□ -0.79
TCF4-246ENST00000570287 YTHDC2Q9H6S0 1430 aaKnown RBP10.09□□□□□ -0.79
TCF4-246ENST00000570287 ATG7O95352 703 aa10.09□□□□□ -0.79
TCF4-246ENST00000570287 MARSP56192 900 aaKnown RBP10.09□□□□□ -0.79
TCF4-246ENST00000570287 WWC1Q8IX03 1113 aa10.09□□□□□ -0.79
TCF4-246ENST00000570287 TSPOAP1O95153 1857 aa10.09□□□□□ -0.79
TCF4-246ENST00000570287 C20orf194Q5TEA3 1177 aa10.09□□□□□ -0.79
TCF4-246ENST00000570287 RUNDC1Q96C34 613 aa10.09□□□□□ -0.79
TCF4-246ENST00000570287 GJD4Q96KN9 370 aaPredicted RBP10.09□□□□□ -0.79
TCF4-246ENST00000570287 LNPKQ9C0E8 428 aa10.09□□□□□ -0.79
TCF4-246ENST00000570287 ATAD2Q6PL18 1390 aa10.09□□□□□ -0.79
TCF4-246ENST00000570287 PRR7Q8TB68 274 aa10.08□□□□□ -0.8
TCF4-246ENST00000570287 UPF1Q92900 1129 aaKnown RBP eCLIP10.08□□□□□ -0.8
TCF4-246ENST00000570287 ALKQ9UM73 1620 aa10.08□□□□□ -0.8
TCF4-246ENST00000570287 KDM2BQ8NHM5 1336 aa10.08□□□□□ -0.8
TCF4-246ENST00000570287 ABCC11Q96J66 1382 aa10.08□□□□□ -0.8
TCF4-246ENST00000570287 MTHFSP49914 203 aa10.08□□□□□ -0.8
TCF4-246ENST00000570287 STK26Q9P289 416 aa10.08□□□□□ -0.8
TCF4-246ENST00000570287 SPATA31D1Q6ZQQ2 1576 aa10.08□□□□□ -0.8
TCF4-246ENST00000570287 IQSEC2Q5JU85 1478 aa10.08□□□□□ -0.8
TCF4-246ENST00000570287 TNNT2P45379 298 aaPredicted RBP10.08□□□□□ -0.8
TCF4-246ENST00000570287 RNF39Q9H2S5 420 aa10.08□□□□□ -0.8
TCF4-246ENST00000570287 PRDM10Q9NQV6 1147 aa10.08□□□□□ -0.8
TCF4-246ENST00000570287 MAFBQ9Y5Q3 323 aaPredicted RBP10.08□□□□□ -0.8
TCF4-246ENST00000570287 HSP90AA2PQ14568 343 aaPredicted RBP10.07□□□□□ -0.8
TCF4-246ENST00000570287 TBC1D9Q6ZT07 1266 aa10.07□□□□□ -0.8
TCF4-246ENST00000570287 A0A1W2PP64 1363 aa10.07□□□□□ -0.8
TCF4-246ENST00000570287 SAFB2Q14151 953 aaKnown RBP eCLIP10.06□□□□□ -0.8
TCF4-246ENST00000570287 TMEM259Q4ZIN3 620 aa10.06□□□□□ -0.8
TCF4-246ENST00000570287 EXOC8Q8IYI6 725 aa10.06□□□□□ -0.8
TCF4-246ENST00000570287 DHX38Q92620 1227 aaKnown RBP10.06□□□□□ -0.8
TCF4-246ENST00000570287 MED14O60244 1454 aa10.06□□□□□ -0.8
TCF4-246ENST00000570287 PPP2R2DQ66LE6 453 aa10.06□□□□□ -0.8
TCF4-246ENST00000570287 ZNF579Q8NAF0 562 aaKnown RBP10.06□□□□□ -0.8
TCF4-246ENST00000570287 PRAM1Q96QH2 718 aa10.06□□□□□ -0.8
TCF4-246ENST00000570287 POGKQ9P215 609 aa10.06□□□□□ -0.8
TCF4-246ENST00000570287 CCDC61Q9Y6R9 512 aa10.06□□□□□ -0.8
TCF4-246ENST00000570287 MAP4K4O95819 1239 aaPredicted RBP10.06□□□□□ -0.8
TCF4-246ENST00000570287 ERCC5P28715 1186 aaPredicted RBP10.06□□□□□ -0.8
TCF4-246ENST00000570287 C8orf34Q49A92 452 aa10.06□□□□□ -0.8
TCF4-246ENST00000570287 L1TD1Q5T7N2 865 aaKnown RBP10.06□□□□□ -0.8
TCF4-246ENST00000570287 CENPQQ7L2Z9 268 aaPredicted RBP10.06□□□□□ -0.8
TCF4-246ENST00000570287 TERF2IPQ9NYB0 399 aa10.06□□□□□ -0.8
TCF4-246ENST00000570287 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
TCF4-246ENST00000570287 ANKRD26Q9UPS8 1709 aa10.05□□□□□ -0.8
TCF4-246ENST00000570287 A2ML1A8K2U0 1454 aa10.05□□□□□ -0.8
TCF4-246ENST00000570287 DLC1Q96QB1 1528 aa10.05□□□□□ -0.8
TCF4-246ENST00000570287 GTF2E1P29083 439 aaPredicted RBP10.05□□□□□ -0.8
TCF4-246ENST00000570287 WDR63Q8IWG1 891 aa10.05□□□□□ -0.8
TCF4-246ENST00000570287 USP17L8P0C7I0 530 aa10.05□□□□□ -0.8
TCF4-246ENST00000570287 TCP11L2Q8N4U5 519 aa10.05□□□□□ -0.8
TCF4-246ENST00000570287 SECISBP2LQ93073 1101 aaKnown RBP10.05□□□□□ -0.8
TCF4-246ENST00000570287 NPDC1Q9NQX5 325 aaPredicted RBP10.05□□□□□ -0.8
TCF4-246ENST00000570287 SOWAHDA6NJG2 315 aa10.04□□□□□ -0.8
TCF4-246ENST00000570287 TPD52L2O43399 206 aaKnown RBP10.04□□□□□ -0.8
TCF4-246ENST00000570287 ARHGEF40Q8TER5 1519 aa10.04□□□□□ -0.8
TCF4-246ENST00000570287 SLC4A3P48751 1232 aa10.04□□□□□ -0.8
TCF4-246ENST00000570287 CHMP4BQ9H444 224 aaKnown RBP10.04□□□□□ -0.8
TCF4-246ENST00000570287 IQSEC3Q9UPP2 1182 aaPredicted RBP10.04□□□□□ -0.8
TCF4-246ENST00000570287 CD163L1Q9NR16 1453 aa10.04□□□□□ -0.8
TCF4-246ENST00000570287 PARNO95453 639 aaKnown RBP10.04□□□□□ -0.8
TCF4-246ENST00000570287 RIMS2Q9UQ26 1411 aa10.03□□□□□ -0.8
TCF4-246ENST00000570287 HSP90AA1P07900 732 aaKnown RBP10.03□□□□□ -0.8
TCF4-246ENST00000570287 ILDR1Q86SU0 546 aaPredicted RBP10.03□□□□□ -0.8
TCF4-246ENST00000570287 NLGN1Q8N2Q7 840 aa10.03□□□□□ -0.8
TCF4-246ENST00000570287 ALG2Q9H553 416 aa10.03□□□□□ -0.8
TCF4-246ENST00000570287 PIF1Q9H611 641 aa10.03□□□□□ -0.8
TCF4-246ENST00000570287 ADGRB2O60241 1585 aa10.03□□□□□ -0.8
TCF4-246ENST00000570287 BCAR3O75815 825 aa10.03□□□□□ -0.8
TCF4-246ENST00000570287 PDE3AQ14432 1141 aa10.03□□□□□ -0.8
TCF4-246ENST00000570287 SETD1AO15047 1707 aaKnown RBP10.03□□□□□ -0.8
TCF4-246ENST00000570287 HDGFL2Q7Z4V5 671 aaPredicted RBP10.02□□□□□ -0.8
TCF4-246ENST00000570287 NLRP1Q9C000 1473 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms