RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 CCT4P50991 539 aaKnown RBP7.59□□□□□ -1.19
CYLD-216ENST00000569891 PRDM11Q9NQV5 511 aa7.59□□□□□ -1.19
CYLD-216ENST00000569891 LRRC37A3O60309 1634 aa7.59□□□□□ -1.19
CYLD-216ENST00000569891 A0A1B0GUL6 1792 aa7.59□□□□□ -1.19
CYLD-216ENST00000569891 FBLN1P23142 703 aa7.59□□□□□ -1.19
CYLD-216ENST00000569891 MTHFSDQ2M296 383 aaKnown RBP7.59□□□□□ -1.19
CYLD-216ENST00000569891 AEBP1Q8IUX7 1158 aa7.59□□□□□ -1.19
CYLD-216ENST00000569891 DDRGK1Q96HY6 314 aa7.59□□□□□ -1.19
CYLD-216ENST00000569891 NOB1Q9ULX3 412 aaKnown RBP7.58□□□□□ -1.2
CYLD-216ENST00000569891 MED1Q15648 1581 aaPredicted RBP7.58□□□□□ -1.2
CYLD-216ENST00000569891 VAMP4O75379 141 aa7.58□□□□□ -1.2
CYLD-216ENST00000569891 KIAA1551Q9HCM1 1747 aa7.58□□□□□ -1.2
CYLD-216ENST00000569891 CPDO75976 1380 aa7.58□□□□□ -1.2
CYLD-216ENST00000569891 EVA1CP58658 441 aa7.58□□□□□ -1.2
CYLD-216ENST00000569891 LRRC59Q96AG4 307 aaKnown RBP7.58□□□□□ -1.2
CYLD-216ENST00000569891 RBM33Q96EV2 1170 aaKnown RBP7.58□□□□□ -1.2
CYLD-216ENST00000569891 PIAS4Q8N2W9 510 aaPredicted RBP7.58□□□□□ -1.2
CYLD-216ENST00000569891 PANK1Q8TE04 598 aa7.58□□□□□ -1.2
CYLD-216ENST00000569891 NFAT5O94916 1531 aa7.57□□□□□ -1.2
CYLD-216ENST00000569891 DDX58O95786 925 aaKnown RBP7.57□□□□□ -1.2
CYLD-216ENST00000569891 GCC1Q96CN9 775 aa7.57□□□□□ -1.2
CYLD-216ENST00000569891 BCL2L13Q9BXK5 485 aa7.57□□□□□ -1.2
CYLD-216ENST00000569891 TSHZ2Q9NRE2 1034 aa7.57□□□□□ -1.2
CYLD-216ENST00000569891 PLCH1Q4KWH8 1693 aa7.57□□□□□ -1.2
CYLD-216ENST00000569891 UBR2Q8IWV8 1755 aa7.57□□□□□ -1.2
CYLD-216ENST00000569891 GNAI3P08754 354 aa7.57□□□□□ -1.2
CYLD-216ENST00000569891 XPCQ01831 940 aaPredicted RBP7.57□□□□□ -1.2
CYLD-216ENST00000569891 IFNL2Q8IZJ0 200 aa7.57□□□□□ -1.2
CYLD-216ENST00000569891 MRPL50Q8N5N7 158 aaKnown RBP7.57□□□□□ -1.2
CYLD-216ENST00000569891 TRIM27P14373 513 aa7.57□□□□□ -1.2
CYLD-216ENST00000569891 KCNA4P22459 653 aa7.57□□□□□ -1.2
CYLD-216ENST00000569891 TTC5Q8N0Z6 440 aa7.57□□□□□ -1.2
CYLD-216ENST00000569891 MCM10Q7L590 875 aa7.56□□□□□ -1.2
CYLD-216ENST00000569891 ZC3H6P61129 1189 aaKnown RBP7.56□□□□□ -1.2
CYLD-216ENST00000569891 HDAC1Q13547 482 aaPredicted RBP7.56□□□□□ -1.2
CYLD-216ENST00000569891 ERBB3P21860 1342 aa7.56□□□□□ -1.2
CYLD-216ENST00000569891 BRINP3Q76B58 766 aa7.56□□□□□ -1.2
CYLD-216ENST00000569891 TOM1O60784 492 aa7.55□□□□□ -1.2
CYLD-216ENST00000569891 RPAP2Q8IXW5 612 aaPredicted RBP7.55□□□□□ -1.2
CYLD-216ENST00000569891 SOS2Q07890 1332 aaPredicted RBP7.55□□□□□ -1.2
CYLD-216ENST00000569891 CICQ96RK0 1608 aaPredicted RBP7.55□□□□□ -1.2
CYLD-216ENST00000569891 BTBD11A6QL63 1104 aa7.55□□□□□ -1.2
CYLD-216ENST00000569891 FAM161AQ3B820 660 aa7.55□□□□□ -1.2
CYLD-216ENST00000569891 HDGFL1Q5TGJ6 251 aa7.55□□□□□ -1.2
CYLD-216ENST00000569891 TOM1L2Q6ZVM7 507 aa7.55□□□□□ -1.2
CYLD-216ENST00000569891 THUMPD2Q9BTF0 503 aaKnown RBP7.55□□□□□ -1.2
CYLD-216ENST00000569891 CDCA7Q9BWT1 371 aaPredicted RBP7.55□□□□□ -1.2
CYLD-216ENST00000569891 WDFY4Q6ZS81 3184 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 C5orf42Q9H799 3197 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 ELL2O00472 640 aaPredicted RBP7.54□□□□□ -1.2
CYLD-216ENST00000569891 C20orf194Q5TEA3 1177 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 NBPF6Q5VWK0 638 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 NBPF4Q96M43 638 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 RBM19Q9Y4C8 960 aaKnown RBP7.54□□□□□ -1.2
CYLD-216ENST00000569891 DCAF5Q96JK2 942 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 ZNF335Q9H4Z2 1342 aaPredicted RBP7.54□□□□□ -1.2
CYLD-216ENST00000569891 PLEKHG5O94827 1062 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 SLC4A2P04920 1241 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 CASC1Q6TDU7 716 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 FAM83GA6ND36 823 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 DCTN1Q14203 1278 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 NPM2Q86SE8 214 aaKnown RBP7.54□□□□□ -1.2
CYLD-216ENST00000569891 TMEM57Q8N5G2 664 aa7.54□□□□□ -1.2
CYLD-216ENST00000569891 KDM2BQ8NHM5 1336 aa7.53□□□□□ -1.2
CYLD-216ENST00000569891 PCDH11XQ9BZA7 1347 aa7.53□□□□□ -1.2
CYLD-216ENST00000569891 PCDH11YQ9BZA8 1340 aa7.53□□□□□ -1.2
CYLD-216ENST00000569891 CRB1P82279 1406 aa7.53□□□□□ -1.2
CYLD-216ENST00000569891 RNMTO43148 476 aaKnown RBP7.53□□□□□ -1.2
CYLD-216ENST00000569891 FKBP5Q13451 457 aaPredicted RBP7.53□□□□□ -1.2
CYLD-216ENST00000569891 ABCC4O15439 1325 aa7.53□□□□□ -1.2
CYLD-216ENST00000569891 COL4A1P02462 1669 aa7.53□□□□□ -1.2
CYLD-216ENST00000569891 INTS3Q68E01 1043 aaKnown RBP7.53□□□□□ -1.2
CYLD-216ENST00000569891 C8orf58Q8NAV2 365 aa7.53□□□□□ -1.2
CYLD-216ENST00000569891 HSP90AB4PQ58FF6 505 aa7.53□□□□□ -1.2
CYLD-216ENST00000569891 HYPKQ9NX55 129 aa7.53□□□□□ -1.2
CYLD-216ENST00000569891 DBF4Q9UBU7 674 aaPredicted RBP7.53□□□□□ -1.2
CYLD-216ENST00000569891 PXDNQ92626 1479 aa7.53□□□□□ -1.2
CYLD-216ENST00000569891 HMGB2P26583 209 aaKnown RBP7.52□□□□□ -1.2
CYLD-216ENST00000569891 NEXNQ0ZGT2 675 aa7.52□□□□□ -1.2
CYLD-216ENST00000569891 WDR17Q8IZU2 1322 aa7.52□□□□□ -1.2
CYLD-216ENST00000569891 RGS3P49796 1198 aa7.52□□□□□ -1.21
CYLD-216ENST00000569891 FRYLO94915 3013 aa7.52□□□□□ -1.21
CYLD-216ENST00000569891 TNS1Q9HBL0 1735 aaKnown RBP7.52□□□□□ -1.21
CYLD-216ENST00000569891 CABP4P57796 275 aa7.52□□□□□ -1.21
CYLD-216ENST00000569891 USHBP1Q8N6Y0 703 aa7.52□□□□□ -1.21
CYLD-216ENST00000569891 ZBTB40Q9NUA8 1239 aa7.52□□□□□ -1.21
CYLD-216ENST00000569891 CEMIPQ8WUJ3 1361 aa7.52□□□□□ -1.21
CYLD-216ENST00000569891 GNAI2P04899 355 aa7.51□□□□□ -1.21
CYLD-216ENST00000569891 IL2RBP14784 551 aa7.51□□□□□ -1.21
CYLD-216ENST00000569891 PDE4AP27815 886 aa7.51□□□□□ -1.21
CYLD-216ENST00000569891 CARD10Q9BWT7 1032 aa7.51□□□□□ -1.21
CYLD-216ENST00000569891 TEX13AQ9BXU3 409 aaPredicted RBP7.51□□□□□ -1.21
CYLD-216ENST00000569891 PKD1L3Q7Z443 1732 aa7.51□□□□□ -1.21
CYLD-216ENST00000569891 BECN1Q14457 450 aa7.51□□□□□ -1.21
CYLD-216ENST00000569891 ERBB4Q15303 1308 aa7.51□□□□□ -1.21
CYLD-216ENST00000569891 ZCRB1Q8TBF4 217 aaKnown RBP7.51□□□□□ -1.21
CYLD-216ENST00000569891 SLC4A10Q6U841 1118 aa7.51□□□□□ -1.21
CYLD-216ENST00000569891 FMNL2Q96PY5 1086 aa7.51□□□□□ -1.21
CYLD-216ENST00000569891 PXDNLA1KZ92 1463 aa7.5□□□□□ -1.21
CYLD-216ENST00000569891 FLIIQ13045 1269 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms