RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 ANO8Q9HCE9 1232 aaPredicted RBP16.59■□□□□ 0.25
NSMCE1-214ENST00000569236 STK32BQ9NY57 414 aa16.59■□□□□ 0.25
NSMCE1-214ENST00000569236 ASAP1Q9ULH1 1129 aa16.59■□□□□ 0.25
NSMCE1-214ENST00000569236 PAPPAQ13219 1627 aa16.59■□□□□ 0.25
NSMCE1-214ENST00000569236 KCNQ4P56696 695 aa16.59■□□□□ 0.25
NSMCE1-214ENST00000569236 SLC52A2Q9HAB3 445 aa16.59■□□□□ 0.25
NSMCE1-214ENST00000569236 ATG3Q9NT62 314 aa16.59■□□□□ 0.25
NSMCE1-214ENST00000569236 MAPK8IP3Q9UPT6 1336 aa16.58■□□□□ 0.25
NSMCE1-214ENST00000569236 PLEKHF1Q96S99 279 aa16.58■□□□□ 0.24
NSMCE1-214ENST00000569236 MRC1P22897 1456 aa16.58■□□□□ 0.24
NSMCE1-214ENST00000569236 SLC15A2Q16348 729 aa16.57■□□□□ 0.24
NSMCE1-214ENST00000569236 HMGB2P26583 209 aaKnown RBP16.56■□□□□ 0.24
NSMCE1-214ENST00000569236 RTF1Q92541 710 aaKnown RBP16.56■□□□□ 0.24
NSMCE1-214ENST00000569236 C5P01031 1676 aa16.56■□□□□ 0.24
NSMCE1-214ENST00000569236 LOC102724428A0A0B4J2F2 783 aa16.56■□□□□ 0.24
NSMCE1-214ENST00000569236 SIK1P57059 783 aa16.56■□□□□ 0.24
NSMCE1-214ENST00000569236 IL17REQ8NFR9 667 aa16.56■□□□□ 0.24
NSMCE1-214ENST00000569236 TAF1LQ8IZX4 1826 aa16.55■□□□□ 0.24
NSMCE1-214ENST00000569236 TEFQ10587 303 aa16.55■□□□□ 0.24
NSMCE1-214ENST00000569236 DLG5Q8TDM6 1919 aa16.54■□□□□ 0.24
NSMCE1-214ENST00000569236 ATP6V1AP38606 617 aa16.54■□□□□ 0.24
NSMCE1-214ENST00000569236 ZNF827Q17R98 1081 aa16.54■□□□□ 0.24
NSMCE1-214ENST00000569236 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
NSMCE1-214ENST00000569236 ADAMTS8Q9UP79 889 aa16.54■□□□□ 0.24
NSMCE1-214ENST00000569236 CEMIPQ8WUJ3 1361 aa16.53■□□□□ 0.24
NSMCE1-214ENST00000569236 HTATSF1O43719 755 aaKnown RBP16.53■□□□□ 0.24
NSMCE1-214ENST00000569236 NFE2L2Q16236 605 aa16.53■□□□□ 0.24
NSMCE1-214ENST00000569236 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
NSMCE1-214ENST00000569236 SRCAPQ6ZRS2 3230 aa16.52■□□□□ 0.24
NSMCE1-214ENST00000569236 SIPA1L3O60292 1781 aaPredicted RBP16.52■□□□□ 0.24
NSMCE1-214ENST00000569236 CCDC184Q52MB2 194 aa16.52■□□□□ 0.24
NSMCE1-214ENST00000569236 MCM10Q7L590 875 aa16.52■□□□□ 0.24
NSMCE1-214ENST00000569236 CCDC146Q8IYE0 955 aa16.52■□□□□ 0.24
NSMCE1-214ENST00000569236 ZNF831Q5JPB2 1677 aa16.52■□□□□ 0.23
NSMCE1-214ENST00000569236 PTCD1O75127 700 aaKnown RBP16.51■□□□□ 0.23
NSMCE1-214ENST00000569236 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
NSMCE1-214ENST00000569236 TFCP2L1Q9NZI6 479 aa16.51■□□□□ 0.23
NSMCE1-214ENST00000569236 C4BP0C0L5 1744 aa16.51■□□□□ 0.23
NSMCE1-214ENST00000569236 SLC39A6Q13433 755 aa16.51■□□□□ 0.23
NSMCE1-214ENST00000569236 RUNDC1Q96C34 613 aa16.51■□□□□ 0.23
NSMCE1-214ENST00000569236 QSER1Q2KHR3 1735 aa16.5■□□□□ 0.23
NSMCE1-214ENST00000569236 CASZ1Q86V15 1759 aa16.5■□□□□ 0.23
NSMCE1-214ENST00000569236 ITPK1Q13572 414 aa16.5■□□□□ 0.23
NSMCE1-214ENST00000569236 DCTN1Q14203 1278 aa16.5■□□□□ 0.23
NSMCE1-214ENST00000569236 TTC5Q8N0Z6 440 aa16.49■□□□□ 0.23
NSMCE1-214ENST00000569236 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
NSMCE1-214ENST00000569236 TUBGCP6Q96RT7 1819 aa16.49■□□□□ 0.23
NSMCE1-214ENST00000569236 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
NSMCE1-214ENST00000569236 AK7Q96M32 723 aa16.49■□□□□ 0.23
NSMCE1-214ENST00000569236 PDGFDQ9GZP0 370 aaPredicted RBP16.49■□□□□ 0.23
NSMCE1-214ENST00000569236 BTBD11A6QL63 1104 aa16.48■□□□□ 0.23
NSMCE1-214ENST00000569236 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
NSMCE1-214ENST00000569236 RIPK4P57078 832 aa16.48■□□□□ 0.23
NSMCE1-214ENST00000569236 UBR2Q8IWV8 1755 aa16.47■□□□□ 0.23
NSMCE1-214ENST00000569236 COL5A3P25940 1745 aaPredicted RBP16.47■□□□□ 0.23
NSMCE1-214ENST00000569236 ZNF790Q6PG37 636 aa16.47■□□□□ 0.23
NSMCE1-214ENST00000569236 KCPQ6ZWJ8 1503 aa16.47■□□□□ 0.23
NSMCE1-214ENST00000569236 PNPLA7Q6ZV29 1317 aa16.46■□□□□ 0.23
NSMCE1-214ENST00000569236 CICQ96RK0 1608 aaPredicted RBP16.46■□□□□ 0.23
NSMCE1-214ENST00000569236 TJP1Q07157 1748 aa16.46■□□□□ 0.23
NSMCE1-214ENST00000569236 LRP5O75197 1615 aa16.46■□□□□ 0.23
NSMCE1-214ENST00000569236 HNRNPUQ00839 825 aaKnown RBP eCLIP16.46■□□□□ 0.22
NSMCE1-214ENST00000569236 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.22
NSMCE1-214ENST00000569236 NEUROD2Q15784 382 aa16.46■□□□□ 0.22
NSMCE1-214ENST00000569236 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.22
NSMCE1-214ENST00000569236 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.22
NSMCE1-214ENST00000569236 UBR3Q6ZT12 1888 aa16.45■□□□□ 0.22
NSMCE1-214ENST00000569236 ZBTB7AO95365 584 aa16.44■□□□□ 0.22
NSMCE1-214ENST00000569236 TAF7Q15545 349 aaPredicted RBP16.44■□□□□ 0.22
NSMCE1-214ENST00000569236 VSIG10Q8N0Z9 540 aa16.44■□□□□ 0.22
NSMCE1-214ENST00000569236 THUMPD2Q9BTF0 503 aaKnown RBP16.44■□□□□ 0.22
NSMCE1-214ENST00000569236 SPON1Q9HCB6 807 aa16.44■□□□□ 0.22
NSMCE1-214ENST00000569236 GNPATO15228 680 aa16.43■□□□□ 0.22
NSMCE1-214ENST00000569236 MSH5O43196 834 aa16.43■□□□□ 0.22
NSMCE1-214ENST00000569236 FLAD1Q8NFF5 587 aa16.43■□□□□ 0.22
NSMCE1-214ENST00000569236 ZNF496Q96IT1 587 aaPredicted RBP16.43■□□□□ 0.22
NSMCE1-214ENST00000569236 CNTNAP4Q9C0A0 1308 aa16.43■□□□□ 0.22
NSMCE1-214ENST00000569236 DNAJC10Q8IXB1 793 aa16.43■□□□□ 0.22
NSMCE1-214ENST00000569236 FMNL2Q96PY5 1086 aa16.43■□□□□ 0.22
NSMCE1-214ENST00000569236 MTFR1LQ9H019 292 aa16.43■□□□□ 0.22
NSMCE1-214ENST00000569236 PHF14O94880 888 aa16.42■□□□□ 0.22
NSMCE1-214ENST00000569236 RC3H1Q5TC82 1133 aaKnown RBP16.42■□□□□ 0.22
NSMCE1-214ENST00000569236 COL23A1Q86Y22 540 aaPredicted RBP16.42■□□□□ 0.22
NSMCE1-214ENST00000569236 SLC16A10Q8TF71 515 aa16.42■□□□□ 0.22
NSMCE1-214ENST00000569236 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 APAF1O14727 1248 aa16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 KCNQ3O43525 872 aa16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 SSFA2P28290 1259 aa16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 FAM9BQ8IZU0 186 aa16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 RTCBQ9Y3I0 505 aaKnown RBP16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 HEG1Q9ULI3 1381 aa16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 MYH14Q7Z406 1995 aaKnown RBP16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 CRKLP46109 303 aaKnown RBP16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 AMIGO3Q86WK7 504 aa16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 MIS18AQ9NYP9 233 aa16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
NSMCE1-214ENST00000569236 KDM3BQ7LBC6 1761 aa16.4■□□□□ 0.22
NSMCE1-214ENST00000569236 SMIM5Q71RC9 77 aa16.39■□□□□ 0.21
NSMCE1-214ENST00000569236 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
NSMCE1-214ENST00000569236 TRIM35Q9UPQ4 493 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms