RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 ICMTO60725 284 aa9.75□□□□□ -0.85
UBR1-208ENST00000569066 CCDC125Q86Z20 511 aa9.75□□□□□ -0.85
UBR1-208ENST00000569066 GLYCTKQ8IVS8 523 aa9.75□□□□□ -0.85
UBR1-208ENST00000569066 A0A1W2PRU2 124 aa9.74□□□□□ -0.85
UBR1-208ENST00000569066 SLC19A1P41440 591 aa9.73□□□□□ -0.85
UBR1-208ENST00000569066 DHX9Q08211 1270 aaKnown RBP9.73□□□□□ -0.85
UBR1-208ENST00000569066 SAP130Q9H0E3 1048 aa9.73□□□□□ -0.85
UBR1-208ENST00000569066 WNT7AO00755 349 aa9.73□□□□□ -0.85
UBR1-208ENST00000569066 ARHGAP4P98171 946 aa9.73□□□□□ -0.85
UBR1-208ENST00000569066 MYT1Q01538 1121 aa9.73□□□□□ -0.85
UBR1-208ENST00000569066 AMOTL2Q9Y2J4 779 aa9.73□□□□□ -0.85
UBR1-208ENST00000569066 ALDH1A1P00352 501 aa9.72□□□□□ -0.85
UBR1-208ENST00000569066 CBLBQ13191 982 aa9.72□□□□□ -0.85
UBR1-208ENST00000569066 KDF1Q8NAX2 398 aaPredicted RBP9.72□□□□□ -0.85
UBR1-208ENST00000569066 WASLO00401 505 aaPredicted RBP9.72□□□□□ -0.85
UBR1-208ENST00000569066 IGFBP4P22692 258 aa9.72□□□□□ -0.85
UBR1-208ENST00000569066 NR5A1Q13285 461 aa9.72□□□□□ -0.85
UBR1-208ENST00000569066 ATAD2Q6PL18 1390 aa9.72□□□□□ -0.85
UBR1-208ENST00000569066 EGFL7Q9UHF1 273 aa9.72□□□□□ -0.85
UBR1-208ENST00000569066 IL2RAP01589 272 aa9.71□□□□□ -0.85
UBR1-208ENST00000569066 ANKRD33BA6NCL7 494 aa9.71□□□□□ -0.86
UBR1-208ENST00000569066 FOXC1Q12948 553 aa9.71□□□□□ -0.86
UBR1-208ENST00000569066 MPNDQ8N594 471 aa9.71□□□□□ -0.86
UBR1-208ENST00000569066 SPRYD7Q5W111 196 aa9.7□□□□□ -0.86
UBR1-208ENST00000569066 CYP2U1Q7Z449 544 aa9.7□□□□□ -0.86
UBR1-208ENST00000569066 SLC9A9Q8IVB4 645 aa9.7□□□□□ -0.86
UBR1-208ENST00000569066 NNTQ13423 1086 aa9.7□□□□□ -0.86
UBR1-208ENST00000569066 SH3PXD2AQ5TCZ1 1133 aa9.7□□□□□ -0.86
UBR1-208ENST00000569066 SCHIP1Q9P0W5 487 aaPredicted RBP9.7□□□□□ -0.86
UBR1-208ENST00000569066 BACH1O14867 736 aa9.69□□□□□ -0.86
UBR1-208ENST00000569066 GNRH1P01148 92 aa9.69□□□□□ -0.86
UBR1-208ENST00000569066 TAGLNQ01995 201 aaKnown RBP9.69□□□□□ -0.86
UBR1-208ENST00000569066 NPAS4Q8IUM7 802 aa9.69□□□□□ -0.86
UBR1-208ENST00000569066 ITPKCQ96DU7 683 aa9.69□□□□□ -0.86
UBR1-208ENST00000569066 SLC4A9Q96Q91 983 aa9.69□□□□□ -0.86
UBR1-208ENST00000569066 E9PSI1 815 aa9.68□□□□□ -0.86
UBR1-208ENST00000569066 PPP1R12BO60237 982 aaPredicted RBP9.68□□□□□ -0.86
UBR1-208ENST00000569066 PTCD1O75127 700 aaKnown RBP9.68□□□□□ -0.86
UBR1-208ENST00000569066 MAPK1P28482 360 aa9.68□□□□□ -0.86
UBR1-208ENST00000569066 FKBP4Q02790 459 aaKnown RBP eCLIP9.68□□□□□ -0.86
UBR1-208ENST00000569066 ZNF697Q5TEC3 545 aa9.68□□□□□ -0.86
UBR1-208ENST00000569066 HELQQ8TDG4 1101 aa9.68□□□□□ -0.86
UBR1-208ENST00000569066 A6NJY4 79 aa9.68□□□□□ -0.86
UBR1-208ENST00000569066 FOXO3O43524 673 aa9.68□□□□□ -0.86
UBR1-208ENST00000569066 FOXK2Q01167 660 aa9.68□□□□□ -0.86
UBR1-208ENST00000569066 CNKSR1Q969H4 720 aa9.68□□□□□ -0.86
UBR1-208ENST00000569066 AGBL1Q96MI9 1066 aa9.68□□□□□ -0.86
UBR1-208ENST00000569066 PKD2L1Q9P0L9 805 aa9.68□□□□□ -0.86
UBR1-208ENST00000569066 MPSTP25325 297 aa9.67□□□□□ -0.86
UBR1-208ENST00000569066 ZFAND3Q9H8U3 227 aa9.67□□□□□ -0.86
UBR1-208ENST00000569066 RBM47A0AV96 593 aaKnown RBP9.67□□□□□ -0.86
UBR1-208ENST00000569066 SMTNP53814 917 aa9.67□□□□□ -0.86
UBR1-208ENST00000569066 EMILIN1Q9Y6C2 1016 aa9.67□□□□□ -0.86
UBR1-208ENST00000569066 J3QL48 77 aa9.66□□□□□ -0.86
UBR1-208ENST00000569066 FAM26DQ5JW98 314 aa9.66□□□□□ -0.86
UBR1-208ENST00000569066 GIPC2Q8TF65 315 aa9.66□□□□□ -0.86
UBR1-208ENST00000569066 C2orf49Q9BVC5 232 aaPredicted RBP9.66□□□□□ -0.86
UBR1-208ENST00000569066 BCL2L13Q9BXK5 485 aa9.66□□□□□ -0.86
UBR1-208ENST00000569066 IQSEC3Q9UPP2 1182 aaPredicted RBP9.66□□□□□ -0.86
UBR1-208ENST00000569066 ZNF16P17020 682 aaPredicted RBP9.66□□□□□ -0.86
UBR1-208ENST00000569066 TLR1Q15399 786 aa9.66□□□□□ -0.86
UBR1-208ENST00000569066 PGPEP1Q9NXJ5 209 aa9.66□□□□□ -0.86
UBR1-208ENST00000569066 KIAA1522Q9P206 1035 aaPredicted RBP9.66□□□□□ -0.86
UBR1-208ENST00000569066 MTFR1Q15390 333 aa9.65□□□□□ -0.86
UBR1-208ENST00000569066 LRFN2Q9ULH4 789 aa9.65□□□□□ -0.86
UBR1-208ENST00000569066 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
UBR1-208ENST00000569066 ADH1AP07327 375 aa9.65□□□□□ -0.87
UBR1-208ENST00000569066 SF3B2Q13435 895 aaKnown RBP9.65□□□□□ -0.87
UBR1-208ENST00000569066 COL26A1Q96A83 441 aa9.65□□□□□ -0.87
UBR1-208ENST00000569066 QTRT2Q9H974 415 aaKnown RBP9.65□□□□□ -0.87
UBR1-208ENST00000569066 MMRN1Q13201 1228 aa9.64□□□□□ -0.87
UBR1-208ENST00000569066 COX20Q5RI15 118 aa9.64□□□□□ -0.87
UBR1-208ENST00000569066 KLF16Q9BXK1 252 aaPredicted RBP9.64□□□□□ -0.87
UBR1-208ENST00000569066 HRH3Q9Y5N1 445 aa9.64□□□□□ -0.87
UBR1-208ENST00000569066 WASF2Q9Y6W5 498 aa9.64□□□□□ -0.87
UBR1-208ENST00000569066 TNFRSF10AO00220 468 aa9.63□□□□□ -0.87
UBR1-208ENST00000569066 C16orf46Q6P387 395 aa9.63□□□□□ -0.87
UBR1-208ENST00000569066 VTI1AQ96AJ9 217 aa9.63□□□□□ -0.87
UBR1-208ENST00000569066 DCTN4Q9UJW0 460 aa9.63□□□□□ -0.87
UBR1-208ENST00000569066 ZIC2O95409 532 aaPredicted RBP9.63□□□□□ -0.87
UBR1-208ENST00000569066 RELBQ01201 579 aa9.63□□□□□ -0.87
UBR1-208ENST00000569066 ESCO1Q5FWF5 840 aa9.63□□□□□ -0.87
UBR1-208ENST00000569066 ZDHHC1Q8WTX9 485 aa9.63□□□□□ -0.87
UBR1-208ENST00000569066 NGLY1Q96IV0 654 aa9.63□□□□□ -0.87
UBR1-208ENST00000569066 ESYT1Q9BSJ8 1104 aa9.63□□□□□ -0.87
UBR1-208ENST00000569066 ZNF395Q9H8N7 513 aaPredicted RBP9.63□□□□□ -0.87
UBR1-208ENST00000569066 TNFRSF10BO14763 440 aa9.62□□□□□ -0.87
UBR1-208ENST00000569066 XAGE2Q96GT9 111 aa9.62□□□□□ -0.87
UBR1-208ENST00000569066 ZNF598Q86UK7 904 aaKnown RBP9.62□□□□□ -0.87
UBR1-208ENST00000569066 MRRFQ96E11 262 aaKnown RBP9.62□□□□□ -0.87
UBR1-208ENST00000569066 MEN1O00255 615 aa9.61□□□□□ -0.87
UBR1-208ENST00000569066 ZBTB39O15060 712 aa9.61□□□□□ -0.87
UBR1-208ENST00000569066 CLN3Q13286 438 aa9.61□□□□□ -0.87
UBR1-208ENST00000569066 ATCAYQ86WG3 371 aa9.61□□□□□ -0.87
UBR1-208ENST00000569066 ZNF295-AS1Q8N0V1 137 aa9.61□□□□□ -0.87
UBR1-208ENST00000569066 PRKD2Q9BZL6 878 aa9.61□□□□□ -0.87
UBR1-208ENST00000569066 WDR4P57081 412 aaKnown RBP9.61□□□□□ -0.87
UBR1-208ENST00000569066 PSMA6P60900 246 aaKnown RBP9.61□□□□□ -0.87
UBR1-208ENST00000569066 ASB16Q96NS5 453 aa9.61□□□□□ -0.87
UBR1-208ENST00000569066 FHDC1Q9C0D6 1143 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms