RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
CNOT1-214ENST00000568917 AEBP1Q8IUX7 1158 aa12.11□□□□□ -0.47
CNOT1-214ENST00000568917 COL18A1P39060 1754 aa12.1□□□□□ -0.47
CNOT1-214ENST00000568917 LMO7Q8WWI1 1683 aa12.1□□□□□ -0.47
CNOT1-214ENST00000568917 RARSP54136 660 aaKnown RBP12.1□□□□□ -0.47
CNOT1-214ENST00000568917 HAP1P54257 671 aaPredicted RBP12.1□□□□□ -0.47
CNOT1-214ENST00000568917 LMOD2Q6P5Q4 547 aa12.1□□□□□ -0.47
CNOT1-214ENST00000568917 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
CNOT1-214ENST00000568917 LRRC37A3O60309 1634 aa12.1□□□□□ -0.47
CNOT1-214ENST00000568917 BRPF1P55201 1214 aaPredicted RBP12.09□□□□□ -0.47
CNOT1-214ENST00000568917 AAMPQ13685 434 aa12.09□□□□□ -0.47
CNOT1-214ENST00000568917 ALDH1L2Q3SY69 923 aa12.09□□□□□ -0.47
CNOT1-214ENST00000568917 BABAM1Q9NWV8 329 aa12.09□□□□□ -0.47
CNOT1-214ENST00000568917 MS4A1P11836 297 aa12.08□□□□□ -0.48
CNOT1-214ENST00000568917 AHDC1Q5TGY3 1603 aaPredicted RBP12.07□□□□□ -0.48
CNOT1-214ENST00000568917 ABCA3Q99758 1704 aa12.07□□□□□ -0.48
CNOT1-214ENST00000568917 MTHFSDQ2M296 383 aaKnown RBP12.07□□□□□ -0.48
CNOT1-214ENST00000568917 AMOTQ4VCS5 1084 aa12.07□□□□□ -0.48
CNOT1-214ENST00000568917 RTF1Q92541 710 aaKnown RBP12.07□□□□□ -0.48
CNOT1-214ENST00000568917 L3MBTL3Q96JM7 780 aaPredicted RBP12.07□□□□□ -0.48
CNOT1-214ENST00000568917 ERBB3P21860 1342 aa12.07□□□□□ -0.48
CNOT1-214ENST00000568917 OVOS2A0A0G2JMS6 1433 aa12.06□□□□□ -0.48
CNOT1-214ENST00000568917 CRB1P82279 1406 aa12.06□□□□□ -0.48
CNOT1-214ENST00000568917 RGPD2P0DJD1 1756 aa12.06□□□□□ -0.48
CNOT1-214ENST00000568917 RGPD5Q99666 1765 aa12.06□□□□□ -0.48
CNOT1-214ENST00000568917 EXOSC9Q06265 439 aaKnown RBP12.06□□□□□ -0.48
CNOT1-214ENST00000568917 NBPF6Q5VWK0 638 aa12.06□□□□□ -0.48
CNOT1-214ENST00000568917 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
CNOT1-214ENST00000568917 TSR2Q969E8 191 aaKnown RBP12.06□□□□□ -0.48
CNOT1-214ENST00000568917 NBPF4Q96M43 638 aa12.06□□□□□ -0.48
CNOT1-214ENST00000568917 SCUBE2Q9NQ36 999 aa12.06□□□□□ -0.48
CNOT1-214ENST00000568917 SOS1Q07889 1333 aaPredicted RBP12.06□□□□□ -0.48
CNOT1-214ENST00000568917 KIAA0232Q92628 1395 aa12.05□□□□□ -0.48
CNOT1-214ENST00000568917 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
CNOT1-214ENST00000568917 GNAT3A8MTJ3 354 aa12.05□□□□□ -0.48
CNOT1-214ENST00000568917 CHL1O00533 1208 aa12.05□□□□□ -0.48
CNOT1-214ENST00000568917 BCAR3O75815 825 aa12.05□□□□□ -0.48
CNOT1-214ENST00000568917 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
CNOT1-214ENST00000568917 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
CNOT1-214ENST00000568917 KIF16BQ96L93 1317 aa12.05□□□□□ -0.48
CNOT1-214ENST00000568917 PLIN1O60240 522 aa12.04□□□□□ -0.48
CNOT1-214ENST00000568917 EXOC6Q8TAG9 804 aa12.04□□□□□ -0.48
CNOT1-214ENST00000568917 DDX17Q92841 729 aaKnown RBP12.04□□□□□ -0.48
CNOT1-214ENST00000568917 LTV1Q96GA3 475 aaPredicted RBP12.04□□□□□ -0.48
CNOT1-214ENST00000568917 CCDC136Q96JN2 1154 aa12.04□□□□□ -0.48
CNOT1-214ENST00000568917 MBIPQ9NS73 344 aa12.04□□□□□ -0.48
CNOT1-214ENST00000568917 COL22A1Q8NFW1 1626 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-214ENST00000568917 ROBO1Q9Y6N7 1651 aa12.03□□□□□ -0.48
CNOT1-214ENST00000568917 IPO8O15397 1037 aaKnown RBP12.03□□□□□ -0.48
CNOT1-214ENST00000568917 CANXP27824 592 aaKnown RBP12.03□□□□□ -0.48
CNOT1-214ENST00000568917 PLEKHO1Q53GL0 409 aaPredicted RBP12.03□□□□□ -0.48
CNOT1-214ENST00000568917 AXIN2Q9Y2T1 843 aa12.03□□□□□ -0.48
CNOT1-214ENST00000568917 CEMIPQ8WUJ3 1361 aa12.03□□□□□ -0.48
CNOT1-214ENST00000568917 FAM83GA6ND36 823 aa12.02□□□□□ -0.49
CNOT1-214ENST00000568917 ZC3H6P61129 1189 aaKnown RBP12.02□□□□□ -0.49
CNOT1-214ENST00000568917 AKAP4Q5JQC9 854 aa12.02□□□□□ -0.49
CNOT1-214ENST00000568917 ZKSCAN2Q63HK3 967 aa12.02□□□□□ -0.49
CNOT1-214ENST00000568917 ARHGAP45Q92619 1136 aa12.02□□□□□ -0.49
CNOT1-214ENST00000568917 CRBNQ96SW2 442 aa12.02□□□□□ -0.49
CNOT1-214ENST00000568917 ADAMTS7Q9UKP4 1686 aa12.01□□□□□ -0.49
CNOT1-214ENST00000568917 VAMP4O75379 141 aa12.01□□□□□ -0.49
CNOT1-214ENST00000568917 LRRC59Q96AG4 307 aaKnown RBP12.01□□□□□ -0.49
CNOT1-214ENST00000568917 THUMPD2Q9BTF0 503 aaKnown RBP12.01□□□□□ -0.49
CNOT1-214ENST00000568917 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
CNOT1-214ENST00000568917 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
CNOT1-214ENST00000568917 CACNA1FO60840 1977 aa12□□□□□ -0.49
CNOT1-214ENST00000568917 VIRMAQ69YN4 1812 aaKnown RBP12□□□□□ -0.49
CNOT1-214ENST00000568917 ZBTB7CA1YPR0 619 aa12□□□□□ -0.49
CNOT1-214ENST00000568917 TWISTNBQ3B726 338 aaPredicted RBP12□□□□□ -0.49
CNOT1-214ENST00000568917 B4GALNT3Q6L9W6 998 aa12□□□□□ -0.49
CNOT1-214ENST00000568917 MCM10Q7L590 875 aa12□□□□□ -0.49
CNOT1-214ENST00000568917 CHMP4AQ9BY43 222 aa12□□□□□ -0.49
CNOT1-214ENST00000568917 PKD1L3Q7Z443 1732 aa11.99□□□□□ -0.49
CNOT1-214ENST00000568917 PPP1R37O75864 691 aa11.99□□□□□ -0.49
CNOT1-214ENST00000568917 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
CNOT1-214ENST00000568917 C20orf194Q5TEA3 1177 aa11.99□□□□□ -0.49
CNOT1-214ENST00000568917 MICALL2Q8IY33 904 aa11.99□□□□□ -0.49
CNOT1-214ENST00000568917 SSH1Q8WYL5 1049 aa11.99□□□□□ -0.49
CNOT1-214ENST00000568917 PARP4Q9UKK3 1724 aaKnown RBP11.98□□□□□ -0.49
CNOT1-214ENST00000568917 TAF7Q15545 349 aaPredicted RBP11.98□□□□□ -0.49
CNOT1-214ENST00000568917 C1orf141Q5JVX7 400 aa11.98□□□□□ -0.49
CNOT1-214ENST00000568917 ATF7IPQ6VMQ6 1270 aa11.98□□□□□ -0.49
CNOT1-214ENST00000568917 USHBP1Q8N6Y0 703 aa11.98□□□□□ -0.49
CNOT1-214ENST00000568917 RAPGEF4Q8WZA2 1011 aa11.98□□□□□ -0.49
CNOT1-214ENST00000568917 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
CNOT1-214ENST00000568917 COL5A2P05997 1499 aaPredicted RBP11.98□□□□□ -0.49
CNOT1-214ENST00000568917 WDR17Q8IZU2 1322 aa11.97□□□□□ -0.49
CNOT1-214ENST00000568917 COL14A1Q05707 1796 aaKnown RBP11.97□□□□□ -0.49
CNOT1-214ENST00000568917 DZIP1LQ8IYY4 767 aaKnown RBP11.97□□□□□ -0.49
CNOT1-214ENST00000568917 IL17REQ8NFR9 667 aa11.97□□□□□ -0.49
CNOT1-214ENST00000568917 CABLES1Q8TDN4 633 aa11.97□□□□□ -0.49
CNOT1-214ENST00000568917 CHMP4BQ9H444 224 aaKnown RBP11.97□□□□□ -0.49
CNOT1-214ENST00000568917 PRDM11Q9NQV5 511 aa11.97□□□□□ -0.49
CNOT1-214ENST00000568917 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.97□□□□□ -0.49
CNOT1-214ENST00000568917 TSPYL4Q9UJ04 414 aa11.97□□□□□ -0.49
CNOT1-214ENST00000568917 SIPA1L3O60292 1781 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-214ENST00000568917 KDM3BQ7LBC6 1761 aa11.96□□□□□ -0.49
CNOT1-214ENST00000568917 TOM1O60784 492 aa11.96□□□□□ -0.49
CNOT1-214ENST00000568917 HOXB7P09629 217 aa11.96□□□□□ -0.49
CNOT1-214ENST00000568917 TATP17735 454 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms