RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 TPRNQ4KMQ1 711 aa11.94□□□□□ -0.5
TCF4-240ENST00000568673 NECTIN2Q92692 538 aa11.94□□□□□ -0.5
TCF4-240ENST00000568673 SDSP20132 328 aa11.93□□□□□ -0.5
TCF4-240ENST00000568673 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
TCF4-240ENST00000568673 FAM208AQ9UK61 1670 aaKnown RBP11.93□□□□□ -0.5
TCF4-240ENST00000568673 NPHP4O75161 1426 aaPredicted RBP11.93□□□□□ -0.5
TCF4-240ENST00000568673 MCM4P33991 863 aa11.93□□□□□ -0.5
TCF4-240ENST00000568673 ADAMTSL3P82987 1691 aa11.93□□□□□ -0.5
TCF4-240ENST00000568673 GCP02774 474 aa11.92□□□□□ -0.5
TCF4-240ENST00000568673 HSP90AB1P08238 724 aaKnown RBP11.92□□□□□ -0.5
TCF4-240ENST00000568673 HDGFL1Q5TGJ6 251 aa11.92□□□□□ -0.5
TCF4-240ENST00000568673 CASC1Q6TDU7 716 aa11.92□□□□□ -0.5
TCF4-240ENST00000568673 PHRF1Q9P1Y6 1649 aaKnown RBP11.92□□□□□ -0.5
TCF4-240ENST00000568673 ATP8B2P98198 1209 aa11.92□□□□□ -0.5
TCF4-240ENST00000568673 ORAI2Q96SN7 254 aa11.92□□□□□ -0.5
TCF4-240ENST00000568673 CHMP4AQ9BY43 222 aa11.92□□□□□ -0.5
TCF4-240ENST00000568673 LGR6Q9HBX8 967 aa11.92□□□□□ -0.5
TCF4-240ENST00000568673 HOXB7P09629 217 aa11.91□□□□□ -0.5
TCF4-240ENST00000568673 EIF4A1P60842 406 aaKnown RBP11.91□□□□□ -0.5
TCF4-240ENST00000568673 ARHGEF25Q86VW2 580 aa11.91□□□□□ -0.5
TCF4-240ENST00000568673 USP26Q9BXU7 913 aa11.91□□□□□ -0.5
TCF4-240ENST00000568673 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
TCF4-240ENST00000568673 PXDNLA1KZ92 1463 aa11.91□□□□□ -0.5
TCF4-240ENST00000568673 K7ELQ4 463 aaPredicted RBP11.91□□□□□ -0.5
TCF4-240ENST00000568673 CD2BP2O95400 341 aaKnown RBP11.91□□□□□ -0.5
TCF4-240ENST00000568673 PDE1AP54750 535 aa11.91□□□□□ -0.5
TCF4-240ENST00000568673 PLEKHO1Q53GL0 409 aaPredicted RBP11.91□□□□□ -0.5
TCF4-240ENST00000568673 AKAP4Q5JQC9 854 aa11.91□□□□□ -0.5
TCF4-240ENST00000568673 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
TCF4-240ENST00000568673 USP44Q9H0E7 712 aa11.91□□□□□ -0.5
TCF4-240ENST00000568673 PNMA6EA0A0J9YXQ4 647 aa11.9□□□□□ -0.5
TCF4-240ENST00000568673 ZBTB7CA1YPR0 619 aa11.9□□□□□ -0.5
TCF4-240ENST00000568673 AMOTQ4VCS5 1084 aa11.9□□□□□ -0.5
TCF4-240ENST00000568673 LRRCC1Q9C099 1032 aa11.9□□□□□ -0.5
TCF4-240ENST00000568673 EXOC6BQ9Y2D4 811 aa11.9□□□□□ -0.5
TCF4-240ENST00000568673 MED1Q15648 1581 aaPredicted RBP11.9□□□□□ -0.5
TCF4-240ENST00000568673 RABEP1Q15276 862 aa11.9□□□□□ -0.51
TCF4-240ENST00000568673 LRRC59Q96AG4 307 aaKnown RBP11.9□□□□□ -0.51
TCF4-240ENST00000568673 PHAXQ9H814 394 aaKnown RBP11.9□□□□□ -0.51
TCF4-240ENST00000568673 TEFQ10587 303 aa11.89□□□□□ -0.51
TCF4-240ENST00000568673 LRRFIP2Q9Y608 721 aaKnown RBP11.89□□□□□ -0.51
TCF4-240ENST00000568673 SALL3Q9BXA9 1300 aa11.89□□□□□ -0.51
TCF4-240ENST00000568673 HSP90AA1P07900 732 aaKnown RBP11.89□□□□□ -0.51
TCF4-240ENST00000568673 UBTFL1P0CB47 393 aaPredicted RBP11.89□□□□□ -0.51
TCF4-240ENST00000568673 EIF2S2P20042 333 aaKnown RBP11.89□□□□□ -0.51
TCF4-240ENST00000568673 ZNF530Q6P9A1 599 aaPredicted RBP11.89□□□□□ -0.51
TCF4-240ENST00000568673 IBTKQ9P2D0 1353 aaPredicted RBP11.88□□□□□ -0.51
TCF4-240ENST00000568673 N4BP2Q86UW6 1770 aaPredicted RBP11.88□□□□□ -0.51
TCF4-240ENST00000568673 REC8O95072 547 aa11.88□□□□□ -0.51
TCF4-240ENST00000568673 XPCQ01831 940 aaPredicted RBP11.88□□□□□ -0.51
TCF4-240ENST00000568673 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
TCF4-240ENST00000568673 SLIT3O75094 1523 aa11.88□□□□□ -0.51
TCF4-240ENST00000568673 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
TCF4-240ENST00000568673 MPRIPQ6WCQ1 1025 aa11.87□□□□□ -0.51
TCF4-240ENST00000568673 SRCIN1Q9C0H9 1055 aa11.87□□□□□ -0.51
TCF4-240ENST00000568673 RGPD2P0DJD1 1756 aa11.87□□□□□ -0.51
TCF4-240ENST00000568673 ERC2O15083 957 aa11.87□□□□□ -0.51
TCF4-240ENST00000568673 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
TCF4-240ENST00000568673 KRT28Q7Z3Y7 464 aa11.87□□□□□ -0.51
TCF4-240ENST00000568673 PROSER2Q86WR7 435 aaPredicted RBP11.87□□□□□ -0.51
TCF4-240ENST00000568673 LMO7Q8WWI1 1683 aa11.87□□□□□ -0.51
TCF4-240ENST00000568673 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 KCNQ3O43525 872 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 MX1P20591 662 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 RAB3GAP1Q15042 981 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 C1orf141Q5JVX7 400 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 LMOD2Q6P5Q4 547 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 SSH3Q8TE77 659 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 ANKRD24Q8TF21 1146 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 CHPF2Q9P2E5 772 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 KDM3BQ7LBC6 1761 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 RNMTO43148 476 aaKnown RBP11.86□□□□□ -0.51
TCF4-240ENST00000568673 TRAK2O60296 914 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
TCF4-240ENST00000568673 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 STAP2Q9UGK3 403 aa11.86□□□□□ -0.51
TCF4-240ENST00000568673 AXIN2Q9Y2T1 843 aa11.85□□□□□ -0.51
TCF4-240ENST00000568673 PI4KAP2A4QPH2 592 aa11.85□□□□□ -0.51
TCF4-240ENST00000568673 BEND3Q5T5X7 828 aa11.85□□□□□ -0.51
TCF4-240ENST00000568673 PI4KAP1Q8N8J0 262 aa11.85□□□□□ -0.51
TCF4-240ENST00000568673 IL27Q8NEV9 243 aa11.85□□□□□ -0.51
TCF4-240ENST00000568673 DNAAF4Q8WXU2 420 aa11.85□□□□□ -0.51
TCF4-240ENST00000568673 OVOS2A0A0G2JMS6 1433 aa11.85□□□□□ -0.51
TCF4-240ENST00000568673 RAB11FIP3O75154 756 aa11.84□□□□□ -0.51
TCF4-240ENST00000568673 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
TCF4-240ENST00000568673 GBP4Q96PP9 640 aa11.84□□□□□ -0.51
TCF4-240ENST00000568673 DBF4Q9UBU7 674 aaPredicted RBP11.84□□□□□ -0.51
TCF4-240ENST00000568673 BRPF3Q9ULD4 1205 aa11.84□□□□□ -0.51
TCF4-240ENST00000568673 C1orf167Q5SNV9 1468 aa11.84□□□□□ -0.51
TCF4-240ENST00000568673 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
TCF4-240ENST00000568673 POLA2Q14181 598 aa11.84□□□□□ -0.51
TCF4-240ENST00000568673 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
TCF4-240ENST00000568673 MST1RQ04912 1400 aa11.84□□□□□ -0.51
TCF4-240ENST00000568673 TRPM3Q9HCF6 1732 aaPredicted RBP11.83□□□□□ -0.52
TCF4-240ENST00000568673 NBPF7P0C2Y1 421 aaPredicted RBP11.83□□□□□ -0.52
TCF4-240ENST00000568673 TSHZ3Q63HK5 1081 aa11.83□□□□□ -0.52
TCF4-240ENST00000568673 PXDNQ92626 1479 aa11.83□□□□□ -0.52
TCF4-240ENST00000568673 HEG1Q9ULI3 1381 aa11.83□□□□□ -0.52
TCF4-240ENST00000568673 ST18O60284 1047 aa11.83□□□□□ -0.52
TCF4-240ENST00000568673 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms