RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 STK32BQ9NY57 414 aa11.73□□□□□ -0.53
RPAP1-211ENST00000568413 MAP3K5Q99683 1374 aa11.72□□□□□ -0.53
RPAP1-211ENST00000568413 TMPOP42166 694 aaKnown RBP11.72□□□□□ -0.53
RPAP1-211ENST00000568413 PTGER2P43116 358 aa11.72□□□□□ -0.53
RPAP1-211ENST00000568413 CABP4P57796 275 aa11.72□□□□□ -0.53
RPAP1-211ENST00000568413 SLC15A2Q16348 729 aa11.72□□□□□ -0.53
RPAP1-211ENST00000568413 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
RPAP1-211ENST00000568413 TMOD3Q9NYL9 352 aa11.72□□□□□ -0.53
RPAP1-211ENST00000568413 KCNQ4P56696 695 aa11.71□□□□□ -0.53
RPAP1-211ENST00000568413 RIPK4P57078 832 aa11.71□□□□□ -0.53
RPAP1-211ENST00000568413 LMOD3Q0VAK6 560 aa11.71□□□□□ -0.53
RPAP1-211ENST00000568413 ZNF827Q17R98 1081 aa11.71□□□□□ -0.53
RPAP1-211ENST00000568413 IL17REQ8NFR9 667 aa11.71□□□□□ -0.53
RPAP1-211ENST00000568413 APAF1O14727 1248 aa11.7□□□□□ -0.54
RPAP1-211ENST00000568413 YY1P25490 414 aa11.7□□□□□ -0.54
RPAP1-211ENST00000568413 TEFQ10587 303 aa11.7□□□□□ -0.54
RPAP1-211ENST00000568413 NFATC2IPQ8NCF5 419 aa11.7□□□□□ -0.54
RPAP1-211ENST00000568413 PIGBQ92521 554 aa11.7□□□□□ -0.54
RPAP1-211ENST00000568413 SLC52A2Q9HAB3 445 aa11.7□□□□□ -0.54
RPAP1-211ENST00000568413 LRRC4BQ9NT99 713 aa11.7□□□□□ -0.54
RPAP1-211ENST00000568413 KDM6AO15550 1401 aaPredicted RBP11.69□□□□□ -0.54
RPAP1-211ENST00000568413 NEUROD2Q15784 382 aa11.69□□□□□ -0.54
RPAP1-211ENST00000568413 SMARCC1Q92922 1105 aaPredicted RBP11.69□□□□□ -0.54
RPAP1-211ENST00000568413 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
RPAP1-211ENST00000568413 MCM10Q7L590 875 aa11.68□□□□□ -0.54
RPAP1-211ENST00000568413 RRP7AQ9Y3A4 280 aaKnown RBP11.68□□□□□ -0.54
RPAP1-211ENST00000568413 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
RPAP1-211ENST00000568413 SCN11AQ9UI33 1791 aa11.67□□□□□ -0.54
RPAP1-211ENST00000568413 LY75O60449 1722 aa11.67□□□□□ -0.54
RPAP1-211ENST00000568413 HMGB2P26583 209 aaKnown RBP11.67□□□□□ -0.54
RPAP1-211ENST00000568413 DCTN1Q14203 1278 aa11.67□□□□□ -0.54
RPAP1-211ENST00000568413 NGEFQ8N5V2 710 aa11.67□□□□□ -0.54
RPAP1-211ENST00000568413 FHDC1Q9C0D6 1143 aaPredicted RBP11.67□□□□□ -0.54
RPAP1-211ENST00000568413 ITGB4P16144 1822 aa11.67□□□□□ -0.54
RPAP1-211ENST00000568413 TAF7Q15545 349 aaPredicted RBP11.66□□□□□ -0.54
RPAP1-211ENST00000568413 SGIP1Q9BQI5 828 aa11.66□□□□□ -0.54
RPAP1-211ENST00000568413 ASAP1Q9ULH1 1129 aa11.66□□□□□ -0.54
RPAP1-211ENST00000568413 TRIM35Q9UPQ4 493 aa11.66□□□□□ -0.54
RPAP1-211ENST00000568413 DLG5Q8TDM6 1919 aa11.66□□□□□ -0.54
RPAP1-211ENST00000568413 TOGARAM1Q9Y4F4 1720 aa11.66□□□□□ -0.54
RPAP1-211ENST00000568413 ADAMTS7Q9UKP4 1686 aa11.65□□□□□ -0.54
RPAP1-211ENST00000568413 MTFR1LQ9H019 292 aa11.65□□□□□ -0.54
RPAP1-211ENST00000568413 ATG3Q9NT62 314 aa11.65□□□□□ -0.54
RPAP1-211ENST00000568413 QSER1Q2KHR3 1735 aa11.65□□□□□ -0.54
RPAP1-211ENST00000568413 BTBD11A6QL63 1104 aa11.64□□□□□ -0.55
RPAP1-211ENST00000568413 CALD1Q05682 793 aaKnown RBP11.64□□□□□ -0.55
RPAP1-211ENST00000568413 CCDC27Q2M243 656 aa11.64□□□□□ -0.55
RPAP1-211ENST00000568413 SLC27A3Q5K4L6 730 aa11.64□□□□□ -0.55
RPAP1-211ENST00000568413 AKT1S1Q96B36 256 aa11.64□□□□□ -0.55
RPAP1-211ENST00000568413 SYT17Q9BSW7 474 aa11.64□□□□□ -0.55
RPAP1-211ENST00000568413 VIRMAQ69YN4 1812 aaKnown RBP11.64□□□□□ -0.55
RPAP1-211ENST00000568413 MRC1P22897 1456 aa11.63□□□□□ -0.55
RPAP1-211ENST00000568413 PNPLA7Q6ZV29 1317 aa11.63□□□□□ -0.55
RPAP1-211ENST00000568413 TTC5Q8N0Z6 440 aa11.63□□□□□ -0.55
RPAP1-211ENST00000568413 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
RPAP1-211ENST00000568413 THUMPD2Q9BTF0 503 aaKnown RBP11.63□□□□□ -0.55
RPAP1-211ENST00000568413 BABAM1Q9NWV8 329 aa11.63□□□□□ -0.55
RPAP1-211ENST00000568413 PALLDQ8WX93 1383 aa11.63□□□□□ -0.55
RPAP1-211ENST00000568413 LOC102724428A0A0B4J2F2 783 aa11.62□□□□□ -0.55
RPAP1-211ENST00000568413 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
RPAP1-211ENST00000568413 SIK1P57059 783 aa11.62□□□□□ -0.55
RPAP1-211ENST00000568413 SLC39A6Q13433 755 aa11.62□□□□□ -0.55
RPAP1-211ENST00000568413 ZNF790Q6PG37 636 aa11.62□□□□□ -0.55
RPAP1-211ENST00000568413 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
RPAP1-211ENST00000568413 CCNL1Q9UK58 526 aaPredicted RBP11.62□□□□□ -0.55
RPAP1-211ENST00000568413 PTCD1O75127 700 aaKnown RBP11.61□□□□□ -0.55
RPAP1-211ENST00000568413 WWC1Q8IX03 1113 aa11.61□□□□□ -0.55
RPAP1-211ENST00000568413 ARXQ96QS3 562 aa11.61□□□□□ -0.55
RPAP1-211ENST00000568413 SALL2Q9Y467 1007 aaPredicted RBP11.61□□□□□ -0.55
RPAP1-211ENST00000568413 C5P01031 1676 aa11.61□□□□□ -0.55
RPAP1-211ENST00000568413 COL24A1Q17RW2 1714 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 TAF1LQ8IZX4 1826 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 CHD4Q14839 1912 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 SENP3-EIF4A1A0A087X0R7 540 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 GNAI1P63096 354 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 WDR63Q8IWG1 891 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 FMNL2Q96PY5 1086 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 MIS18AQ9NYP9 233 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 TFCP2L1Q9NZI6 479 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 TSPYL4Q9UJ04 414 aa11.6□□□□□ -0.55
RPAP1-211ENST00000568413 SIPA1L3O60292 1781 aaPredicted RBP11.59□□□□□ -0.55
RPAP1-211ENST00000568413 CHL1O00533 1208 aa11.59□□□□□ -0.55
RPAP1-211ENST00000568413 MSL1Q68DK7 614 aa11.59□□□□□ -0.55
RPAP1-211ENST00000568413 TEX13AQ9BXU3 409 aaPredicted RBP11.59□□□□□ -0.55
RPAP1-211ENST00000568413 LAS1LQ9Y4W2 734 aaKnown RBP11.59□□□□□ -0.55
RPAP1-211ENST00000568413 IL16Q14005 1332 aa11.59□□□□□ -0.55
RPAP1-211ENST00000568413 MSH5O43196 834 aa11.58□□□□□ -0.56
RPAP1-211ENST00000568413 KCNQ3O43525 872 aa11.58□□□□□ -0.56
RPAP1-211ENST00000568413 ZNF853P0CG23 659 aa11.58□□□□□ -0.56
RPAP1-211ENST00000568413 SMIM5Q71RC9 77 aa11.58□□□□□ -0.56
RPAP1-211ENST00000568413 ZNF496Q96IT1 587 aaPredicted RBP11.58□□□□□ -0.56
RPAP1-211ENST00000568413 SLC4A9Q96Q91 983 aa11.58□□□□□ -0.56
RPAP1-211ENST00000568413 IFT57Q9NWB7 429 aa11.58□□□□□ -0.56
RPAP1-211ENST00000568413 EIF4A1P60842 406 aaKnown RBP11.57□□□□□ -0.56
RPAP1-211ENST00000568413 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
RPAP1-211ENST00000568413 NLGN2Q8NFZ4 835 aa11.57□□□□□ -0.56
RPAP1-211ENST00000568413 UTRNP46939 3433 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms