RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-219ENST00000568382 ATG3Q9NT62 314 aa16.46■□□□□ 0.23
SCAPER-219ENST00000568382 VIRMAQ69YN4 1812 aaKnown RBP16.45■□□□□ 0.22
SCAPER-219ENST00000568382 NFATC2IPQ8NCF5 419 aa16.45■□□□□ 0.22
SCAPER-219ENST00000568382 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
SCAPER-219ENST00000568382 CASZ1Q86V15 1759 aa16.45■□□□□ 0.22
SCAPER-219ENST00000568382 LRP5O75197 1615 aa16.45■□□□□ 0.22
SCAPER-219ENST00000568382 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
SCAPER-219ENST00000568382 TAF1LQ8IZX4 1826 aa16.44■□□□□ 0.22
SCAPER-219ENST00000568382 FCHSD2O94868 740 aa16.43■□□□□ 0.22
SCAPER-219ENST00000568382 C5P01031 1676 aa16.43■□□□□ 0.22
SCAPER-219ENST00000568382 LOC102724428A0A0B4J2F2 783 aa16.42■□□□□ 0.22
SCAPER-219ENST00000568382 RNMTO43148 476 aaKnown RBP16.42■□□□□ 0.22
SCAPER-219ENST00000568382 SIK1P57059 783 aa16.42■□□□□ 0.22
SCAPER-219ENST00000568382 TUBGCP6Q96RT7 1819 aa16.41■□□□□ 0.22
SCAPER-219ENST00000568382 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
SCAPER-219ENST00000568382 TFCP2L1Q9NZI6 479 aa16.41■□□□□ 0.22
SCAPER-219ENST00000568382 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
SCAPER-219ENST00000568382 ADAMTS7Q9UKP4 1686 aa16.4■□□□□ 0.22
SCAPER-219ENST00000568382 QSER1Q2KHR3 1735 aa16.4■□□□□ 0.22
SCAPER-219ENST00000568382 ANP32CO43423 234 aa16.4■□□□□ 0.22
SCAPER-219ENST00000568382 ZBTB7AO95365 584 aa16.4■□□□□ 0.22
SCAPER-219ENST00000568382 ATP6V1AP38606 617 aa16.4■□□□□ 0.22
SCAPER-219ENST00000568382 PRKRIP1Q9H875 184 aaPredicted RBP16.4■□□□□ 0.22
SCAPER-219ENST00000568382 SLC52A2Q9HAB3 445 aa16.4■□□□□ 0.22
SCAPER-219ENST00000568382 SPON1Q9HCB6 807 aa16.4■□□□□ 0.22
SCAPER-219ENST00000568382 PNPLA7Q6ZV29 1317 aa16.4■□□□□ 0.22
SCAPER-219ENST00000568382 GNAT3A8MTJ3 354 aa16.39■□□□□ 0.21
SCAPER-219ENST00000568382 ITPK1Q13572 414 aa16.39■□□□□ 0.21
SCAPER-219ENST00000568382 IL17REQ8NFR9 667 aa16.39■□□□□ 0.21
SCAPER-219ENST00000568382 SLC4A9Q96Q91 983 aa16.39■□□□□ 0.21
SCAPER-219ENST00000568382 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
SCAPER-219ENST00000568382 HMGB2P26583 209 aaKnown RBP16.38■□□□□ 0.21
SCAPER-219ENST00000568382 LINC00116Q8NCU8 138 aa16.38■□□□□ 0.21
SCAPER-219ENST00000568382 ATF5Q9Y2D1 282 aaPredicted RBP16.38■□□□□ 0.21
SCAPER-219ENST00000568382 C4BP0C0L5 1744 aa16.38■□□□□ 0.21
SCAPER-219ENST00000568382 MAP3K5Q99683 1374 aa16.38■□□□□ 0.21
SCAPER-219ENST00000568382 DIEXFQ68CQ4 756 aaKnown RBP16.37■□□□□ 0.21
SCAPER-219ENST00000568382 PLEKHF1Q96S99 279 aa16.37■□□□□ 0.21
SCAPER-219ENST00000568382 MRC1P22897 1456 aa16.36■□□□□ 0.21
SCAPER-219ENST00000568382 PTCD1O75127 700 aaKnown RBP16.36■□□□□ 0.21
SCAPER-219ENST00000568382 COL23A1Q86Y22 540 aaPredicted RBP16.36■□□□□ 0.21
SCAPER-219ENST00000568382 MTFR1LQ9H019 292 aa16.36■□□□□ 0.21
SCAPER-219ENST00000568382 ZNF831Q5JPB2 1677 aa16.36■□□□□ 0.21
SCAPER-219ENST00000568382 SRCAPQ6ZRS2 3230 aa16.35■□□□□ 0.21
SCAPER-219ENST00000568382 PTGER2P43116 358 aa16.35■□□□□ 0.21
SCAPER-219ENST00000568382 SLC39A6Q13433 755 aa16.35■□□□□ 0.21
SCAPER-219ENST00000568382 C1QBPQ07021 282 aaKnown RBP16.34■□□□□ 0.21
SCAPER-219ENST00000568382 SMIM5Q71RC9 77 aa16.34■□□□□ 0.21
SCAPER-219ENST00000568382 AMIGO3Q86WK7 504 aa16.34■□□□□ 0.21
SCAPER-219ENST00000568382 SLC16A10Q8TF71 515 aa16.34■□□□□ 0.21
SCAPER-219ENST00000568382 AK7Q96M32 723 aa16.34■□□□□ 0.21
SCAPER-219ENST00000568382 UBR3Q6ZT12 1888 aa16.33■□□□□ 0.21
SCAPER-219ENST00000568382 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
SCAPER-219ENST00000568382 SGIP1Q9BQI5 828 aa16.33■□□□□ 0.2
SCAPER-219ENST00000568382 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.2
SCAPER-219ENST00000568382 COL5A3P25940 1745 aaPredicted RBP16.32■□□□□ 0.2
SCAPER-219ENST00000568382 TEFQ10587 303 aa16.32■□□□□ 0.2
SCAPER-219ENST00000568382 MCM10Q7L590 875 aa16.32■□□□□ 0.2
SCAPER-219ENST00000568382 DLG5Q8TDM6 1919 aa16.32■□□□□ 0.2
SCAPER-219ENST00000568382 CEMIPQ8WUJ3 1361 aa16.32■□□□□ 0.2
SCAPER-219ENST00000568382 PNNQ9H307 717 aaKnown RBP16.32■□□□□ 0.2
SCAPER-219ENST00000568382 NEFMP07197 916 aa16.31■□□□□ 0.2
SCAPER-219ENST00000568382 DCTN1Q14203 1278 aa16.31■□□□□ 0.2
SCAPER-219ENST00000568382 FLAD1Q8NFF5 587 aa16.31■□□□□ 0.2
SCAPER-219ENST00000568382 RTF1Q92541 710 aaKnown RBP16.31■□□□□ 0.2
SCAPER-219ENST00000568382 PPP1R1BQ9UD71 204 aaPredicted RBP16.31■□□□□ 0.2
SCAPER-219ENST00000568382 TJP1Q07157 1748 aa16.31■□□□□ 0.2
SCAPER-219ENST00000568382 COL24A1Q17RW2 1714 aa16.31■□□□□ 0.2
SCAPER-219ENST00000568382 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
SCAPER-219ENST00000568382 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.3■□□□□ 0.2
SCAPER-219ENST00000568382 GNPATO15228 680 aa16.3■□□□□ 0.2
SCAPER-219ENST00000568382 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
SCAPER-219ENST00000568382 PHF14O94880 888 aa16.3■□□□□ 0.2
SCAPER-219ENST00000568382 RC3H1Q5TC82 1133 aaKnown RBP16.3■□□□□ 0.2
SCAPER-219ENST00000568382 KCPQ6ZWJ8 1503 aa16.29■□□□□ 0.2
SCAPER-219ENST00000568382 NFE2L2Q16236 605 aa16.29■□□□□ 0.2
SCAPER-219ENST00000568382 DNAJC10Q8IXB1 793 aa16.29■□□□□ 0.2
SCAPER-219ENST00000568382 UBR2Q8IWV8 1755 aa16.28■□□□□ 0.2
SCAPER-219ENST00000568382 CNTNAP4Q9C0A0 1308 aa16.28■□□□□ 0.2
SCAPER-219ENST00000568382 CICQ96RK0 1608 aaPredicted RBP16.28■□□□□ 0.2
SCAPER-219ENST00000568382 SSFA2P28290 1259 aa16.28■□□□□ 0.2
SCAPER-219ENST00000568382 ZNF790Q6PG37 636 aa16.28■□□□□ 0.2
SCAPER-219ENST00000568382 MAPK8IP3Q9UPT6 1336 aa16.27■□□□□ 0.2
SCAPER-219ENST00000568382 BTBD11A6QL63 1104 aa16.27■□□□□ 0.2
SCAPER-219ENST00000568382 KCNQ3O43525 872 aa16.27■□□□□ 0.2
SCAPER-219ENST00000568382 RPS6KA4O75676 772 aa16.27■□□□□ 0.2
SCAPER-219ENST00000568382 TTC5Q8N0Z6 440 aa16.27■□□□□ 0.2
SCAPER-219ENST00000568382 ADAMTS8Q9UP79 889 aa16.27■□□□□ 0.2
SCAPER-219ENST00000568382 RTCBQ9Y3I0 505 aaKnown RBP16.27■□□□□ 0.2
SCAPER-219ENST00000568382 CRKLP46109 303 aaKnown RBP16.26■□□□□ 0.19
SCAPER-219ENST00000568382 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCAPER-219ENST00000568382 CCDC184Q52MB2 194 aa16.26■□□□□ 0.19
SCAPER-219ENST00000568382 TRAPPC3LQ5T215 181 aa16.26■□□□□ 0.19
SCAPER-219ENST00000568382 INTS5Q6P9B9 1019 aaKnown RBP16.26■□□□□ 0.19
SCAPER-219ENST00000568382 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
SCAPER-219ENST00000568382 VSIG10Q8N0Z9 540 aa16.26■□□□□ 0.19
SCAPER-219ENST00000568382 ZNF496Q96IT1 587 aaPredicted RBP16.26■□□□□ 0.19
SCAPER-219ENST00000568382 ARXQ96QS3 562 aa16.26■□□□□ 0.19
SCAPER-219ENST00000568382 CYP19A1P11511 503 aaPredicted RBP16.25■□□□□ 0.19
SCAPER-219ENST00000568382 MSL1Q68DK7 614 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms