RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 FLIIQ13045 1269 aa12.49□□□□□ -0.41
FANCA-230ENST00000568369 CAMK4Q16566 473 aa12.49□□□□□ -0.41
FANCA-230ENST00000568369 MBIPQ9NS73 344 aa12.49□□□□□ -0.41
FANCA-230ENST00000568369 U3KPZ7 1027 aaPredicted RBP12.49□□□□□ -0.41
FANCA-230ENST00000568369 URB2Q14146 1524 aaKnown RBP12.49□□□□□ -0.41
FANCA-230ENST00000568369 LARP1Q6PKG0 1096 aaKnown RBP12.49□□□□□ -0.41
FANCA-230ENST00000568369 KCNH5Q8NCM2 988 aa12.49□□□□□ -0.41
FANCA-230ENST00000568369 CCDC43Q96MW1 224 aaKnown RBP12.49□□□□□ -0.41
FANCA-230ENST00000568369 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
FANCA-230ENST00000568369 BOLA2Q9H3K6 86 aa12.48□□□□□ -0.41
FANCA-230ENST00000568369 USP25Q9UHP3 1055 aa12.48□□□□□ -0.41
FANCA-230ENST00000568369 LEKR1Q6ZMV7 388 aa12.48□□□□□ -0.41
FANCA-230ENST00000568369 STIM1Q13586 685 aa12.47□□□□□ -0.41
FANCA-230ENST00000568369 IMMTQ16891 758 aaKnown RBP12.47□□□□□ -0.41
FANCA-230ENST00000568369 FAM177A1Q8N128 213 aaPredicted RBP12.47□□□□□ -0.41
FANCA-230ENST00000568369 ANO10Q9NW15 660 aa12.47□□□□□ -0.41
FANCA-230ENST00000568369 CTDP1Q9Y5B0 961 aaPredicted RBP12.47□□□□□ -0.41
FANCA-230ENST00000568369 ERLIN1O75477 346 aa12.47□□□□□ -0.41
FANCA-230ENST00000568369 CDK5RAP3Q96JB5 506 aa12.47□□□□□ -0.41
FANCA-230ENST00000568369 NOL7Q9UMY1 257 aaKnown RBP12.47□□□□□ -0.41
FANCA-230ENST00000568369 SFPQP23246 707 aaKnown RBP eCLIP12.47□□□□□ -0.41
FANCA-230ENST00000568369 POLR3AO14802 1390 aaPredicted RBP12.47□□□□□ -0.41
FANCA-230ENST00000568369 CD109Q6YHK3 1445 aa12.47□□□□□ -0.41
FANCA-230ENST00000568369 TESK2Q96S53 571 aa12.47□□□□□ -0.41
FANCA-230ENST00000568369 PTPN14Q15678 1187 aa12.46□□□□□ -0.41
FANCA-230ENST00000568369 NUP133Q8WUM0 1156 aa12.46□□□□□ -0.41
FANCA-230ENST00000568369 UBXN4Q92575 508 aa12.46□□□□□ -0.41
FANCA-230ENST00000568369 MPHOSPH8Q99549 860 aa12.46□□□□□ -0.41
FANCA-230ENST00000568369 CT47A1Q5JQC4 288 aaPredicted RBP12.46□□□□□ -0.41
FANCA-230ENST00000568369 TOM1L2Q6ZVM7 507 aa12.46□□□□□ -0.41
FANCA-230ENST00000568369 SNX21Q969T3 373 aa12.46□□□□□ -0.41
FANCA-230ENST00000568369 GDPD2Q9HCC8 539 aa12.46□□□□□ -0.41
FANCA-230ENST00000568369 STX6O43752 255 aa12.46□□□□□ -0.42
FANCA-230ENST00000568369 CFAP100Q494V2 611 aa12.46□□□□□ -0.42
FANCA-230ENST00000568369 DDX19AQ9NUU7 478 aaKnown RBP12.46□□□□□ -0.42
FANCA-230ENST00000568369 H0YHG0 523 aa12.46□□□□□ -0.42
FANCA-230ENST00000568369 XRCC6P12956 609 aaKnown RBP eCLIP12.46□□□□□ -0.428e-8■■■■■ 32.2
FANCA-230ENST00000568369 DDX54Q8TDD1 881 aaKnown RBP12.46□□□□□ -0.42
FANCA-230ENST00000568369 WASF1Q92558 559 aa12.46□□□□□ -0.42
FANCA-230ENST00000568369 ECHDC1Q9NTX5 307 aa12.46□□□□□ -0.42
FANCA-230ENST00000568369 TTC21BQ7Z4L5 1316 aa12.45□□□□□ -0.42
FANCA-230ENST00000568369 HMGB1P09429 215 aaKnown RBP12.45□□□□□ -0.42
FANCA-230ENST00000568369 AXDND1Q5T1B0 1012 aaPredicted RBP12.45□□□□□ -0.42
FANCA-230ENST00000568369 CCAR1Q8IX12 1150 aaKnown RBP12.45□□□□□ -0.42
FANCA-230ENST00000568369 DBF4Q9UBU7 674 aaPredicted RBP12.45□□□□□ -0.42
FANCA-230ENST00000568369 CTAGE5O15320 804 aa12.45□□□□□ -0.42
FANCA-230ENST00000568369 AMOTQ4VCS5 1084 aa12.45□□□□□ -0.42
FANCA-230ENST00000568369 UBAC1Q9BSL1 405 aa12.45□□□□□ -0.42
FANCA-230ENST00000568369 PDCL3Q9H2J4 239 aa12.45□□□□□ -0.42
FANCA-230ENST00000568369 STRN4Q9NRL3 753 aa12.45□□□□□ -0.42
FANCA-230ENST00000568369 EIF3JO75822 258 aaKnown RBP12.45□□□□□ -0.42
FANCA-230ENST00000568369 CLCN1P35523 988 aa12.45□□□□□ -0.42
FANCA-230ENST00000568369 TCOF1Q13428 1488 aaKnown RBP12.45□□□□□ -0.42
FANCA-230ENST00000568369 ANKLE2Q86XL3 938 aa12.44□□□□□ -0.42
FANCA-230ENST00000568369 LUC7LQ9NQ29 371 aaKnown RBP12.44□□□□□ -0.42
FANCA-230ENST00000568369 PATL2C9JE40 543 aaKnown RBP12.44□□□□□ -0.42
FANCA-230ENST00000568369 KIF18AQ8NI77 898 aa12.44□□□□□ -0.42
FANCA-230ENST00000568369 CCDC8Q9H0W5 538 aaPredicted RBP12.44□□□□□ -0.42
FANCA-230ENST00000568369 SDSP20132 328 aa12.44□□□□□ -0.42
FANCA-230ENST00000568369 TDO2P48775 406 aa12.44□□□□□ -0.42
FANCA-230ENST00000568369 UVSSAQ2YD98 709 aa12.44□□□□□ -0.42
FANCA-230ENST00000568369 STK11IPQ8N1F8 1099 aa12.44□□□□□ -0.42
FANCA-230ENST00000568369 EVI5LQ96CN4 794 aa12.44□□□□□ -0.42
FANCA-230ENST00000568369 MYO6Q9UM54 1294 aa12.44□□□□□ -0.42
FANCA-230ENST00000568369 FAM83GA6ND36 823 aa12.44□□□□□ -0.42
FANCA-230ENST00000568369 PIK3C2GO75747 1445 aa12.43□□□□□ -0.42
FANCA-230ENST00000568369 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
FANCA-230ENST00000568369 IDH1O75874 414 aaKnown RBP12.43□□□□□ -0.42
FANCA-230ENST00000568369 UBE2HP62256 183 aa12.43□□□□□ -0.42
FANCA-230ENST00000568369 TMX3Q96JJ7 454 aa12.43□□□□□ -0.42
FANCA-230ENST00000568369 CKAP2LQ8IYA6 745 aa12.43□□□□□ -0.42
FANCA-230ENST00000568369 ANKRD44Q8N8A2 993 aa12.43□□□□□ -0.42
FANCA-230ENST00000568369 ZSCAN23Q3MJ62 389 aa12.43□□□□□ -0.42
FANCA-230ENST00000568369 AKAP2Q9Y2D5 859 aa12.43□□□□□ -0.42
FANCA-230ENST00000568369 C8orf76Q96K31 380 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 PRDM11Q9NQV5 511 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 CLIP2Q9UDT6 1046 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 GJB2P29033 226 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 LRSAM1Q6UWE0 723 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 DEF6Q9H4E7 631 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 NEMFO60524 1076 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 ADCY5O95622 1261 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 IFIT1P09914 478 aaKnown RBP12.42□□□□□ -0.42
FANCA-230ENST00000568369 ZC3H6P61129 1189 aaKnown RBP12.42□□□□□ -0.42
FANCA-230ENST00000568369 ARHGAP29Q52LW3 1261 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 PPP1R42Q7Z4L9 355 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 AIDAQ96BJ3 306 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
FANCA-230ENST00000568369 RLBP1P12271 317 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 SMC5Q8IY18 1101 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 TXLNBQ8N3L3 684 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 MEIS3Q99687 375 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 HYPKQ9NX55 129 aa12.42□□□□□ -0.42
FANCA-230ENST00000568369 CEP131Q9UPN4 1083 aa12.41□□□□□ -0.42
FANCA-230ENST00000568369 ZSCAN12O43309 604 aa12.41□□□□□ -0.42
FANCA-230ENST00000568369 EPB41L2O43491 1005 aaKnown RBP12.41□□□□□ -0.42
FANCA-230ENST00000568369 CAVIN2O95810 425 aa12.41□□□□□ -0.42
FANCA-230ENST00000568369 ANAPC15P60006 121 aa12.41□□□□□ -0.42
FANCA-230ENST00000568369 MYD88Q99836 296 aa12.41□□□□□ -0.42
FANCA-230ENST00000568369 RAPGEF6Q8TEU7 1601 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms