RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 MICALL2Q8IY33 904 aa9.41□□□□□ -0.9
ATXN3-250ENST00000568290 TRIM44Q96DX7 344 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-250ENST00000568290 STK31Q9BXU1 1019 aa9.41□□□□□ -0.9
ATXN3-250ENST00000568290 LNPKQ9C0E8 428 aa9.41□□□□□ -0.9
ATXN3-250ENST00000568290 SRCIN1Q9C0H9 1055 aa9.41□□□□□ -0.9
ATXN3-250ENST00000568290 DCTPP1Q9H773 170 aa9.41□□□□□ -0.9
ATXN3-250ENST00000568290 MBIPQ9NS73 344 aa9.41□□□□□ -0.9
ATXN3-250ENST00000568290 RTL1A6NKG5 1358 aa9.4□□□□□ -0.9
ATXN3-250ENST00000568290 ARHGEF10O15013 1369 aa9.4□□□□□ -0.9
ATXN3-250ENST00000568290 TNRQ92752 1358 aa9.4□□□□□ -0.9
ATXN3-250ENST00000568290 GNAI3P08754 354 aa9.4□□□□□ -0.9
ATXN3-250ENST00000568290 ANKRD44Q8N8A2 993 aa9.4□□□□□ -0.9
ATXN3-250ENST00000568290 NCOA3Q9Y6Q9 1424 aa9.39□□□□□ -0.91
ATXN3-250ENST00000568290 PDIA4P13667 645 aaKnown RBP9.39□□□□□ -0.91
ATXN3-250ENST00000568290 RAB3GAP1Q15042 981 aa9.39□□□□□ -0.91
ATXN3-250ENST00000568290 FBXO31Q5XUX0 539 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-250ENST00000568290 CLEC17AQ6ZS10 378 aa9.39□□□□□ -0.91
ATXN3-250ENST00000568290 BOLA1Q9Y3E2 137 aa9.39□□□□□ -0.91
ATXN3-250ENST00000568290 IBTKQ9P2D0 1353 aaPredicted RBP9.38□□□□□ -0.91
ATXN3-250ENST00000568290 PLEKHG1Q9ULL1 1385 aa9.38□□□□□ -0.91
ATXN3-250ENST00000568290 DIP2BQ9P265 1576 aa9.38□□□□□ -0.91
ATXN3-250ENST00000568290 CHL1O00533 1208 aa9.38□□□□□ -0.91
ATXN3-250ENST00000568290 HMOX1P09601 288 aa9.38□□□□□ -0.91
ATXN3-250ENST00000568290 ITSN1Q15811 1721 aa9.38□□□□□ -0.91
ATXN3-250ENST00000568290 MYO5BQ9ULV0 1848 aa9.38□□□□□ -0.91
ATXN3-250ENST00000568290 TMEM2Q9UHN6 1383 aa9.37□□□□□ -0.91
ATXN3-250ENST00000568290 MON2Q7Z3U7 1717 aa9.37□□□□□ -0.91
ATXN3-250ENST00000568290 FSD2A1L4K1 749 aa9.37□□□□□ -0.91
ATXN3-250ENST00000568290 TTC22Q5TAA0 569 aa9.37□□□□□ -0.91
ATXN3-250ENST00000568290 CCDC30Q5VVM6 783 aa9.37□□□□□ -0.91
ATXN3-250ENST00000568290 WAPLQ7Z5K2 1190 aa9.37□□□□□ -0.91
ATXN3-250ENST00000568290 L3MBTL3Q96JM7 780 aaPredicted RBP9.37□□□□□ -0.91
ATXN3-250ENST00000568290 TNNQ9UQP3 1299 aa9.37□□□□□ -0.91
ATXN3-250ENST00000568290 ANAPC15P60006 121 aa9.36□□□□□ -0.91
ATXN3-250ENST00000568290 HSP90AB4PQ58FF6 505 aa9.36□□□□□ -0.91
ATXN3-250ENST00000568290 TBC1D9Q6ZT07 1266 aa9.36□□□□□ -0.91
ATXN3-250ENST00000568290 NME9Q86XW9 330 aa9.36□□□□□ -0.91
ATXN3-250ENST00000568290 SYAP1Q96A49 352 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-250ENST00000568290 EMILIN1Q9Y6C2 1016 aa9.36□□□□□ -0.91
ATXN3-250ENST00000568290 NRKQ7Z2Y5 1582 aa9.36□□□□□ -0.91
ATXN3-250ENST00000568290 SBNO1A3KN83 1393 aa9.36□□□□□ -0.91
ATXN3-250ENST00000568290 FLT4P35916 1363 aa9.36□□□□□ -0.91
ATXN3-250ENST00000568290 USP31Q70CQ4 1352 aa9.36□□□□□ -0.91
ATXN3-250ENST00000568290 MAP2P11137 1827 aaKnown RBP9.35□□□□□ -0.91
ATXN3-250ENST00000568290 AOX1Q06278 1338 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 RIMBP3CA6NJZ7 1639 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 RIMBP3BA6NNM3 1639 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 RIMBP3Q9UFD9 1639 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 ERC2O15083 957 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 GNAI2P04899 355 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 NCLP19338 710 aaKnown RBP9.35□□□□□ -0.91
ATXN3-250ENST00000568290 SULT6B1Q6IMI4 303 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 CYB5RLQ6IPT4 315 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 TXNDC2Q86VQ3 553 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 PHACTR3Q96KR7 559 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 OSBPL3Q9H4L5 887 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 BRPF3Q9ULD4 1205 aa9.35□□□□□ -0.91
ATXN3-250ENST00000568290 NCKAP5LQ9HCH0 1330 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 DIP2AQ14689 1571 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 SSH2Q76I76 1423 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 PHF14O94880 888 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 MBD3O95983 291 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 DDIT3P35638 169 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 CCDC173Q0VFZ6 552 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 KLHL40Q2TBA0 621 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 GLIPR1L2Q4G1C9 344 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 CRISPLD2Q9H0B8 497 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 GRPEL1Q9HAV7 217 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 TBX22Q9Y458 520 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 AKAP12Q02952 1782 aa9.34□□□□□ -0.91
ATXN3-250ENST00000568290 SETD1AO15047 1707 aaKnown RBP9.34□□□□□ -0.92
ATXN3-250ENST00000568290 C3P01024 1663 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 USP6P35125 1406 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 ANKARQ7Z5J8 1434 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 KIF3CO14782 793 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 RAB11FIP3O75154 756 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 HOXB7P09629 217 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 CLCN1P35523 988 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 AMPHP49418 695 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 EIF4A2Q14240 407 aaKnown RBP9.33□□□□□ -0.92
ATXN3-250ENST00000568290 HS1BP3Q53T59 392 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 TMEM92Q6UXU6 159 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 PLEKHM2Q8IWE5 1019 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 THEMISQ8N1K5 641 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-250ENST00000568290 TNPO1Q92973 898 aaKnown RBP9.33□□□□□ -0.92
ATXN3-250ENST00000568290 TSPYL4Q9UJ04 414 aa9.33□□□□□ -0.92
ATXN3-250ENST00000568290 ACEP12821 1306 aa9.32□□□□□ -0.92
ATXN3-250ENST00000568290 OVOS2A0A0J9YW53 1432 aa9.32□□□□□ -0.92
ATXN3-250ENST00000568290 OVOS2Q6IE36 1432 aa9.32□□□□□ -0.92
ATXN3-250ENST00000568290 PTPRUQ92729 1446 aa9.32□□□□□ -0.92
ATXN3-250ENST00000568290 CSPP1Q1MSJ5 1256 aa9.32□□□□□ -0.92
ATXN3-250ENST00000568290 CEP85Q6P2H3 762 aa9.32□□□□□ -0.92
ATXN3-250ENST00000568290 C8orf58Q8NAV2 365 aa9.32□□□□□ -0.92
ATXN3-250ENST00000568290 NGDNQ8NEJ9 315 aaKnown RBP9.32□□□□□ -0.92
ATXN3-250ENST00000568290 METP08581 1390 aa9.32□□□□□ -0.92
ATXN3-250ENST00000568290 PXDNLA1KZ92 1463 aa9.32□□□□□ -0.92
ATXN3-250ENST00000568290 ELL2O00472 640 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-250ENST00000568290 VSIG10Q8N0Z9 540 aa9.31□□□□□ -0.92
ATXN3-250ENST00000568290 TSPYL6Q8N831 410 aa9.31□□□□□ -0.92
ATXN3-250ENST00000568290 INTS4Q96HW7 963 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms