RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 SLC15A2Q16348 729 aa17.29■□□□□ 0.36
CNOT1-213ENST00000568158 STK32BQ9NY57 414 aa17.29■□□□□ 0.36
CNOT1-213ENST00000568158 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
CNOT1-213ENST00000568158 LY75O60449 1722 aa17.28■□□□□ 0.36
CNOT1-213ENST00000568158 SLC52A2Q9HAB3 445 aa17.28■□□□□ 0.36
CNOT1-213ENST00000568158 ADAMTS8Q9UP79 889 aa17.28■□□□□ 0.36
CNOT1-213ENST00000568158 ZNF827Q17R98 1081 aa17.27■□□□□ 0.36
CNOT1-213ENST00000568158 RBM42Q9BTD8 480 aaKnown RBP17.27■□□□□ 0.36
CNOT1-213ENST00000568158 PDGFDQ9GZP0 370 aaPredicted RBP17.27■□□□□ 0.36
CNOT1-213ENST00000568158 PNNQ9H307 717 aaKnown RBP17.27■□□□□ 0.36
CNOT1-213ENST00000568158 MAP3K5Q99683 1374 aa17.27■□□□□ 0.35
CNOT1-213ENST00000568158 VIRMAQ69YN4 1812 aaKnown RBP17.26■□□□□ 0.35
CNOT1-213ENST00000568158 LOC102724428A0A0B4J2F2 783 aa17.26■□□□□ 0.35
CNOT1-213ENST00000568158 NEFMP07197 916 aa17.26■□□□□ 0.35
CNOT1-213ENST00000568158 SIK1P57059 783 aa17.26■□□□□ 0.35
CNOT1-213ENST00000568158 SLC39A6Q13433 755 aa17.26■□□□□ 0.35
CNOT1-213ENST00000568158 DCTN1Q14203 1278 aa17.26■□□□□ 0.35
CNOT1-213ENST00000568158 WDR43Q15061 677 aaKnown RBP eCLIP17.26■□□□□ 0.35
CNOT1-213ENST00000568158 CCDC146Q8IYE0 955 aa17.26■□□□□ 0.35
CNOT1-213ENST00000568158 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
CNOT1-213ENST00000568158 SLC4A9Q96Q91 983 aa17.26■□□□□ 0.35
CNOT1-213ENST00000568158 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
CNOT1-213ENST00000568158 ATP6V1AP38606 617 aa17.25■□□□□ 0.35
CNOT1-213ENST00000568158 C1QBPQ07021 282 aaKnown RBP17.25■□□□□ 0.35
CNOT1-213ENST00000568158 MCM10Q7L590 875 aa17.25■□□□□ 0.35
CNOT1-213ENST00000568158 ITPK1Q13572 414 aa17.24■□□□□ 0.35
CNOT1-213ENST00000568158 TEFQ10587 303 aa17.23■□□□□ 0.35
CNOT1-213ENST00000568158 NFE2L2Q16236 605 aa17.23■□□□□ 0.35
CNOT1-213ENST00000568158 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
CNOT1-213ENST00000568158 MAPK8IP3Q9UPT6 1336 aa17.22■□□□□ 0.35
CNOT1-213ENST00000568158 LINC00116Q8NCU8 138 aa17.22■□□□□ 0.35
CNOT1-213ENST00000568158 TFCP2L1Q9NZI6 479 aa17.22■□□□□ 0.35
CNOT1-213ENST00000568158 HTATSF1O43719 755 aaKnown RBP17.21■□□□□ 0.35
CNOT1-213ENST00000568158 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
CNOT1-213ENST00000568158 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
CNOT1-213ENST00000568158 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
CNOT1-213ENST00000568158 TMPOP42166 694 aaKnown RBP17.2■□□□□ 0.34
CNOT1-213ENST00000568158 RIPK4P57078 832 aa17.2■□□□□ 0.34
CNOT1-213ENST00000568158 NEUROD2Q15784 382 aa17.2■□□□□ 0.34
CNOT1-213ENST00000568158 RUNDC1Q96C34 613 aa17.2■□□□□ 0.34
CNOT1-213ENST00000568158 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
CNOT1-213ENST00000568158 DLG5Q8TDM6 1919 aa17.19■□□□□ 0.34
CNOT1-213ENST00000568158 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
CNOT1-213ENST00000568158 CEMIPQ8WUJ3 1361 aa17.19■□□□□ 0.34
CNOT1-213ENST00000568158 KCNQ3O43525 872 aa17.19■□□□□ 0.34
CNOT1-213ENST00000568158 THUMPD2Q9BTF0 503 aaKnown RBP17.19■□□□□ 0.34
CNOT1-213ENST00000568158 MRS2Q9HD23 443 aa17.19■□□□□ 0.34
CNOT1-213ENST00000568158 ZBTB7AO95365 584 aa17.18■□□□□ 0.34
CNOT1-213ENST00000568158 PNISRQ8TF01 805 aaKnown RBP17.18■□□□□ 0.34
CNOT1-213ENST00000568158 ATF5Q9Y2D1 282 aaPredicted RBP17.18■□□□□ 0.34
CNOT1-213ENST00000568158 PNPLA7Q6ZV29 1317 aa17.18■□□□□ 0.34
CNOT1-213ENST00000568158 MRC1P22897 1456 aa17.18■□□□□ 0.34
CNOT1-213ENST00000568158 BTBD11A6QL63 1104 aa17.17■□□□□ 0.34
CNOT1-213ENST00000568158 AMIGO3Q86WK7 504 aa17.17■□□□□ 0.34
CNOT1-213ENST00000568158 COL23A1Q86Y22 540 aaPredicted RBP17.17■□□□□ 0.34
CNOT1-213ENST00000568158 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
CNOT1-213ENST00000568158 HMGB2P26583 209 aaKnown RBP17.16■□□□□ 0.34
CNOT1-213ENST00000568158 TAF7Q15545 349 aaPredicted RBP17.16■□□□□ 0.34
CNOT1-213ENST00000568158 ZNF790Q6PG37 636 aa17.16■□□□□ 0.34
CNOT1-213ENST00000568158 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
CNOT1-213ENST00000568158 AK7Q96M32 723 aa17.16■□□□□ 0.34
CNOT1-213ENST00000568158 C5P01031 1676 aa17.16■□□□□ 0.34
CNOT1-213ENST00000568158 TTC5Q8N0Z6 440 aa17.15■□□□□ 0.34
CNOT1-213ENST00000568158 ZNF496Q96IT1 587 aaPredicted RBP17.15■□□□□ 0.34
CNOT1-213ENST00000568158 C4BP0C0L5 1744 aa17.14■□□□□ 0.33
CNOT1-213ENST00000568158 SENP3-EIF4A1A0A087X0R7 540 aa17.14■□□□□ 0.33
CNOT1-213ENST00000568158 APAF1O14727 1248 aa17.14■□□□□ 0.33
CNOT1-213ENST00000568158 SPON1Q9HCB6 807 aa17.14■□□□□ 0.33
CNOT1-213ENST00000568158 SIPA1L3O60292 1781 aaPredicted RBP17.14■□□□□ 0.33
CNOT1-213ENST00000568158 TUBGCP6Q96RT7 1819 aa17.13■□□□□ 0.33
CNOT1-213ENST00000568158 GNPATO15228 680 aa17.13■□□□□ 0.33
CNOT1-213ENST00000568158 PHF14O94880 888 aa17.13■□□□□ 0.33
CNOT1-213ENST00000568158 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
CNOT1-213ENST00000568158 TRIM35Q9UPQ4 493 aa17.13■□□□□ 0.33
CNOT1-213ENST00000568158 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
CNOT1-213ENST00000568158 CRKLP46109 303 aaKnown RBP17.12■□□□□ 0.33
CNOT1-213ENST00000568158 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
CNOT1-213ENST00000568158 MYH14Q7Z406 1995 aaKnown RBP17.11■□□□□ 0.33
CNOT1-213ENST00000568158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.11■□□□□ 0.33
CNOT1-213ENST00000568158 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
CNOT1-213ENST00000568158 INTS5Q6P9B9 1019 aaKnown RBP17.11■□□□□ 0.33
CNOT1-213ENST00000568158 VSIG10Q8N0Z9 540 aa17.11■□□□□ 0.33
CNOT1-213ENST00000568158 FLAD1Q8NFF5 587 aa17.11■□□□□ 0.33
CNOT1-213ENST00000568158 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
CNOT1-213ENST00000568158 MTFR1LQ9H019 292 aa17.11■□□□□ 0.33
CNOT1-213ENST00000568158 RPS6KA4O75676 772 aa17.1■□□□□ 0.33
CNOT1-213ENST00000568158 FAM9BQ8IZU0 186 aa17.1■□□□□ 0.33
CNOT1-213ENST00000568158 SLC16A10Q8TF71 515 aa17.1■□□□□ 0.33
CNOT1-213ENST00000568158 RTCBQ9Y3I0 505 aaKnown RBP17.1■□□□□ 0.33
CNOT1-213ENST00000568158 CNTNAP4Q9C0A0 1308 aa17.1■□□□□ 0.33
CNOT1-213ENST00000568158 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
CNOT1-213ENST00000568158 ZNF831Q5JPB2 1677 aa17.1■□□□□ 0.33
CNOT1-213ENST00000568158 PRAMEF22A3QJZ6 481 aa17.09■□□□□ 0.33
CNOT1-213ENST00000568158 PTGER2P43116 358 aa17.09■□□□□ 0.33
CNOT1-213ENST00000568158 LMOD3Q0VAK6 560 aa17.09■□□□□ 0.33
CNOT1-213ENST00000568158 TRAPPC3LQ5T215 181 aa17.09■□□□□ 0.33
CNOT1-213ENST00000568158 USP16Q9Y5T5 823 aa17.09■□□□□ 0.33
CNOT1-213ENST00000568158 QSER1Q2KHR3 1735 aa17.09■□□□□ 0.33
CNOT1-213ENST00000568158 UBR3Q6ZT12 1888 aa17.08■□□□□ 0.33
CNOT1-213ENST00000568158 TJP1Q07157 1748 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms