RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 FOXJ1Q92949 421 aa8.7□□□□□ -1.02
CAPN3-218ENST00000568153 PRM3Q9NNZ6 103 aa8.7□□□□□ -1.02
CAPN3-218ENST00000568153 PZPP20742 1482 aa8.7□□□□□ -1.02
CAPN3-218ENST00000568153 ABCC1P33527 1531 aa8.7□□□□□ -1.02
CAPN3-218ENST00000568153 DUOX2Q9NRD8 1548 aa8.7□□□□□ -1.02
CAPN3-218ENST00000568153 VARSP26640 1264 aaKnown RBP8.69□□□□□ -1.02
CAPN3-218ENST00000568153 ABL2P42684 1182 aa8.69□□□□□ -1.02
CAPN3-218ENST00000568153 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
CAPN3-218ENST00000568153 DIEXFQ68CQ4 756 aaKnown RBP8.69□□□□□ -1.02
CAPN3-218ENST00000568153 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
CAPN3-218ENST00000568153 ZC3H4Q9UPT8 1303 aaKnown RBP8.69□□□□□ -1.02
CAPN3-218ENST00000568153 ERBINQ96RT1 1412 aa8.69□□□□□ -1.02
CAPN3-218ENST00000568153 DENND4BO75064 1496 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-218ENST00000568153 NEO1Q92859 1461 aa8.69□□□□□ -1.02
CAPN3-218ENST00000568153 IRF5Q13568 498 aa8.68□□□□□ -1.02
CAPN3-218ENST00000568153 PDXDC2PQ6P474 469 aa8.68□□□□□ -1.02
CAPN3-218ENST00000568153 SH3BP5LQ7L8J4 393 aa8.68□□□□□ -1.02
CAPN3-218ENST00000568153 CRIPAKQ8N1N5 446 aa8.68□□□□□ -1.02
CAPN3-218ENST00000568153 GPKOWQ92917 476 aaPredicted RBP eCLIP8.68□□□□□ -1.02
CAPN3-218ENST00000568153 OCSTAMPQ9BR26 566 aa8.68□□□□□ -1.02
CAPN3-218ENST00000568153 CROCC2H7BZ55 1655 aa8.67□□□□□ -1.02
CAPN3-218ENST00000568153 ST8SIA5O15466 376 aa8.67□□□□□ -1.02
CAPN3-218ENST00000568153 RAD21O60216 631 aa8.67□□□□□ -1.02
CAPN3-218ENST00000568153 GLI2P10070 1586 aa8.67□□□□□ -1.02
CAPN3-218ENST00000568153 KANK1Q14678 1352 aa8.67□□□□□ -1.02
CAPN3-218ENST00000568153 ZNF518AQ6AHZ1 1483 aa8.67□□□□□ -1.02
CAPN3-218ENST00000568153 SH3RF1Q7Z6J0 888 aa8.67□□□□□ -1.02
CAPN3-218ENST00000568153 ADGBQ8N7X0 1667 aa8.67□□□□□ -1.02
CAPN3-218ENST00000568153 AAASQ9NRG9 546 aa8.67□□□□□ -1.02
CAPN3-218ENST00000568153 TLL2Q9Y6L7 1015 aa8.67□□□□□ -1.02
CAPN3-218ENST00000568153 ALDH1A1P00352 501 aa8.66□□□□□ -1.02
CAPN3-218ENST00000568153 C14orf37Q86TY3 774 aa8.66□□□□□ -1.02
CAPN3-218ENST00000568153 MPNDQ8N594 471 aa8.66□□□□□ -1.02
CAPN3-218ENST00000568153 HPS1Q92902 700 aa8.66□□□□□ -1.02
CAPN3-218ENST00000568153 MLH3Q9UHC1 1453 aa8.65□□□□□ -1.02
CAPN3-218ENST00000568153 SMCPP49901 116 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-218ENST00000568153 GGT6Q6P531 493 aa8.65□□□□□ -1.02
CAPN3-218ENST00000568153 BPHLQ86WA6 291 aaPredicted RBP8.65□□□□□ -1.02
CAPN3-218ENST00000568153 C1QTNF2Q9BXJ5 285 aa8.65□□□□□ -1.02
CAPN3-218ENST00000568153 RPRD2Q5VT52 1461 aaKnown RBP8.64□□□□□ -1.03
CAPN3-218ENST00000568153 POGZQ7Z3K3 1410 aa8.64□□□□□ -1.03
CAPN3-218ENST00000568153 A6NJR5 290 aa8.64□□□□□ -1.03
CAPN3-218ENST00000568153 ZBBXA8MT70 800 aa8.64□□□□□ -1.03
CAPN3-218ENST00000568153 FBXO45P0C2W1 286 aa8.64□□□□□ -1.03
CAPN3-218ENST00000568153 PTK2Q05397 1052 aa8.64□□□□□ -1.03
CAPN3-218ENST00000568153 AGERQ15109 404 aa8.64□□□□□ -1.03
CAPN3-218ENST00000568153 CTC1Q2NKJ3 1217 aa8.64□□□□□ -1.03
CAPN3-218ENST00000568153 FNBP4Q8N3X1 1017 aaPredicted RBP8.64□□□□□ -1.03
CAPN3-218ENST00000568153 FAM174AQ8TBP5 190 aa8.64□□□□□ -1.03
CAPN3-218ENST00000568153 ARHGAP9Q9BRR9 750 aa8.64□□□□□ -1.03
CAPN3-218ENST00000568153 GPSM3Q9Y4H4 160 aa8.64□□□□□ -1.03
CAPN3-218ENST00000568153 PLXNC1O60486 1568 aa8.64□□□□□ -1.03
CAPN3-218ENST00000568153 MAGEB6P1A0A0J9YX57 407 aa8.63□□□□□ -1.03
CAPN3-218ENST00000568153 PROSER2Q86WR7 435 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-218ENST00000568153 CDK15Q96Q40 435 aa8.63□□□□□ -1.03
CAPN3-218ENST00000568153 CARD14Q9BXL6 1004 aa8.63□□□□□ -1.03
CAPN3-218ENST00000568153 ZMYND15Q9H091 742 aa8.63□□□□□ -1.03
CAPN3-218ENST00000568153 ATP7AQ04656 1500 aa8.63□□□□□ -1.03
CAPN3-218ENST00000568153 KDM5DQ9BY66 1539 aa8.63□□□□□ -1.03
CAPN3-218ENST00000568153 TEX14Q8IWB6 1497 aa8.63□□□□□ -1.03
CAPN3-218ENST00000568153 WASHC2CQ9Y4E1 1318 aa8.62□□□□□ -1.03
CAPN3-218ENST00000568153 CFAP74Q9C0B2 1584 aa8.62□□□□□ -1.03
CAPN3-218ENST00000568153 NBPF8Q3BBV2 869 aa8.62□□□□□ -1.03
CAPN3-218ENST00000568153 RGL3Q3MIN7 710 aa8.62□□□□□ -1.03
CAPN3-218ENST00000568153 DCAF11Q8TEB1 546 aa8.62□□□□□ -1.03
CAPN3-218ENST00000568153 FAM135AQ9P2D6 1515 aa8.62□□□□□ -1.03
CAPN3-218ENST00000568153 A2MP01023 1474 aa8.62□□□□□ -1.03
CAPN3-218ENST00000568153 AXIN1O15169 862 aa8.61□□□□□ -1.03
CAPN3-218ENST00000568153 EIF4G2P78344 907 aaKnown RBP eCLIP8.61□□□□□ -1.03
CAPN3-218ENST00000568153 VAC14Q08AM6 782 aa8.61□□□□□ -1.03
CAPN3-218ENST00000568153 NR1H3Q13133 447 aa8.61□□□□□ -1.03
CAPN3-218ENST00000568153 TRMT44Q8IYL2 757 aaKnown RBP8.61□□□□□ -1.03
CAPN3-218ENST00000568153 ADAM32Q8TC27 787 aa8.61□□□□□ -1.03
CAPN3-218ENST00000568153 DACH1Q9UI36 760 aa8.61□□□□□ -1.03
CAPN3-218ENST00000568153 ZFYVE16Q7Z3T8 1539 aa8.6□□□□□ -1.03
CAPN3-218ENST00000568153 ADH1CP00326 375 aa8.6□□□□□ -1.03
CAPN3-218ENST00000568153 ERFEQ4G0M1 354 aa8.6□□□□□ -1.03
CAPN3-218ENST00000568153 ZBTB33Q86T24 672 aa8.6□□□□□ -1.03
CAPN3-218ENST00000568153 WASF2Q9Y6W5 498 aa8.6□□□□□ -1.03
CAPN3-218ENST00000568153 CCDC144AA2RUR9 1427 aa8.6□□□□□ -1.03
CAPN3-218ENST00000568153 WASHC4Q2M389 1173 aa8.59□□□□□ -1.03
CAPN3-218ENST00000568153 ZNF326Q5BKZ1 582 aaKnown RBP8.59□□□□□ -1.03
CAPN3-218ENST00000568153 HIRIP3Q9BW71 556 aaPredicted RBP8.59□□□□□ -1.03
CAPN3-218ENST00000568153 MAP3K4Q9Y6R4 1608 aa8.58□□□□□ -1.04
CAPN3-218ENST00000568153 PLA2R1Q13018 1463 aa8.58□□□□□ -1.04
CAPN3-218ENST00000568153 POM121CA8CG34 1229 aa8.58□□□□□ -1.04
CAPN3-218ENST00000568153 POTECB2RU33 542 aa8.58□□□□□ -1.04
CAPN3-218ENST00000568153 HSPA5P11021 654 aaKnown RBP8.58□□□□□ -1.04
CAPN3-218ENST00000568153 GRM5P41594 1212 aa8.58□□□□□ -1.04
CAPN3-218ENST00000568153 NNTQ13423 1086 aa8.58□□□□□ -1.04
CAPN3-218ENST00000568153 WWC1Q8IX03 1113 aa8.58□□□□□ -1.04
CAPN3-218ENST00000568153 ZNF330Q9Y3S2 320 aaPredicted RBP8.58□□□□□ -1.04
CAPN3-218ENST00000568153 MAP4K5Q9Y4K4 846 aa8.58□□□□□ -1.04
CAPN3-218ENST00000568153 ATP10AO60312 1499 aa8.57□□□□□ -1.04
CAPN3-218ENST00000568153 MAGI2Q86UL8 1455 aa8.57□□□□□ -1.04
CAPN3-218ENST00000568153 KDM5CP41229 1560 aa8.57□□□□□ -1.04
CAPN3-218ENST00000568153 DIP2BQ9P265 1576 aa8.57□□□□□ -1.04
CAPN3-218ENST00000568153 INO80Q9ULG1 1556 aaPredicted RBP8.57□□□□□ -1.04
CAPN3-218ENST00000568153 TRAK2O60296 914 aa8.57□□□□□ -1.04
CAPN3-218ENST00000568153 ARID5BQ14865 1188 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms