RNA–Protein interactions for RNA: ENST00000567745.5

THSD4-204, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 2

Gene THSD4, Length 1,218 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-204ENST00000567745 THUMPD2Q9BTF0 503 aaKnown RBP18.49■□□□□ 0.55
THSD4-204ENST00000567745 KCNQ2O43526 872 aa18.48■□□□□ 0.55
THSD4-204ENST00000567745 CABP4P57796 275 aa18.48■□□□□ 0.55
THSD4-204ENST00000567745 LGR6Q9HBX8 967 aa18.48■□□□□ 0.55
THSD4-204ENST00000567745 KCPQ6ZWJ8 1503 aa18.48■□□□□ 0.55
THSD4-204ENST00000567745 TAF1LQ8IZX4 1826 aa18.47■□□□□ 0.55
THSD4-204ENST00000567745 ERVV-2B6SEH9 535 aa18.47■□□□□ 0.55
THSD4-204ENST00000567745 HTATSF1O43719 755 aaKnown RBP18.47■□□□□ 0.55
THSD4-204ENST00000567745 SLC52A2Q9HAB3 445 aa18.47■□□□□ 0.55
THSD4-204ENST00000567745 SALL2Q9Y467 1007 aaPredicted RBP18.47■□□□□ 0.55
THSD4-204ENST00000567745 COL5A3P25940 1745 aaPredicted RBP18.46■□□□□ 0.55
THSD4-204ENST00000567745 PTF1AQ7RTS3 328 aa18.46■□□□□ 0.55
THSD4-204ENST00000567745 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
THSD4-204ENST00000567745 BCL11BQ9C0K0 894 aaPredicted RBP18.46■□□□□ 0.55
THSD4-204ENST00000567745 ZNF831Q5JPB2 1677 aa18.46■□□□□ 0.55
THSD4-204ENST00000567745 PALLDQ8WX93 1383 aa18.45■□□□□ 0.54
THSD4-204ENST00000567745 SF3B2Q13435 895 aaKnown RBP18.45■□□□□ 0.54
THSD4-204ENST00000567745 TRIM35Q9UPQ4 493 aa18.45■□□□□ 0.54
THSD4-204ENST00000567745 HNRNPUQ00839 825 aaKnown RBP eCLIP18.43■□□□□ 0.54
THSD4-204ENST00000567745 PIGBQ92521 554 aa18.43■□□□□ 0.54
THSD4-204ENST00000567745 TUBGCP6Q96RT7 1819 aa18.42■□□□□ 0.54
THSD4-204ENST00000567745 APBA3O96018 575 aa18.41■□□□□ 0.54
THSD4-204ENST00000567745 CALD1Q05682 793 aaKnown RBP18.41■□□□□ 0.54
THSD4-204ENST00000567745 CCDC27Q2M243 656 aa18.41■□□□□ 0.54
THSD4-204ENST00000567745 NFATC2IPQ8NCF5 419 aa18.41■□□□□ 0.54
THSD4-204ENST00000567745 WWC1Q8IX03 1113 aa18.4■□□□□ 0.54
THSD4-204ENST00000567745 NGEFQ8N5V2 710 aa18.4■□□□□ 0.54
THSD4-204ENST00000567745 BTBD11A6QL63 1104 aa18.39■□□□□ 0.53
THSD4-204ENST00000567745 BAG6P46379 1132 aa18.39■□□□□ 0.53
THSD4-204ENST00000567745 TTC5Q8N0Z6 440 aa18.39■□□□□ 0.53
THSD4-204ENST00000567745 ASAP1Q9ULH1 1129 aa18.39■□□□□ 0.53
THSD4-204ENST00000567745 LAS1LQ9Y4W2 734 aaKnown RBP18.39■□□□□ 0.53
THSD4-204ENST00000567745 C4BP0C0L5 1744 aa18.39■□□□□ 0.53
THSD4-204ENST00000567745 SMARCC1Q92922 1105 aaPredicted RBP18.38■□□□□ 0.53
THSD4-204ENST00000567745 TSPYL4Q9UJ04 414 aa18.38■□□□□ 0.53
THSD4-204ENST00000567745 SLC39A6Q13433 755 aa18.37■□□□□ 0.53
THSD4-204ENST00000567745 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
THSD4-204ENST00000567745 ATG3Q9NT62 314 aa18.37■□□□□ 0.53
THSD4-204ENST00000567745 TAF7Q15545 349 aaPredicted RBP18.36■□□□□ 0.53
THSD4-204ENST00000567745 CCDC125Q86Z20 511 aa18.36■□□□□ 0.53
THSD4-204ENST00000567745 ZNF521Q96K83 1311 aa18.35■□□□□ 0.53
THSD4-204ENST00000567745 DEFB132Q7Z7B7 95 aa18.35■□□□□ 0.53
THSD4-204ENST00000567745 YTHDC1Q96MU7 727 aaKnown RBP18.35■□□□□ 0.53
THSD4-204ENST00000567745 RBM42Q9BTD8 480 aaKnown RBP18.35■□□□□ 0.53
THSD4-204ENST00000567745 IFT57Q9NWB7 429 aa18.35■□□□□ 0.53
THSD4-204ENST00000567745 MIS18AQ9NYP9 233 aa18.35■□□□□ 0.53
THSD4-204ENST00000567745 IL16Q14005 1332 aa18.34■□□□□ 0.53
THSD4-204ENST00000567745 ZBED9Q6R2W3 1325 aa18.34■□□□□ 0.53
THSD4-204ENST00000567745 PTCD1O75127 700 aaKnown RBP18.34■□□□□ 0.53
THSD4-204ENST00000567745 EN1Q05925 392 aaPredicted RBP18.34■□□□□ 0.53
THSD4-204ENST00000567745 ZNF790Q6PG37 636 aa18.34■□□□□ 0.53
THSD4-204ENST00000567745 CCNL1Q9UK58 526 aaPredicted RBP18.34■□□□□ 0.53
THSD4-204ENST00000567745 UBR3Q6ZT12 1888 aa18.34■□□□□ 0.53
THSD4-204ENST00000567745 QSER1Q2KHR3 1735 aa18.34■□□□□ 0.53
THSD4-204ENST00000567745 GNAI1P63096 354 aa18.33■□□□□ 0.52
THSD4-204ENST00000567745 C4AP0C0L4 1744 aa18.32■□□□□ 0.52
THSD4-204ENST00000567745 FANCIQ9NVI1 1328 aa18.32■□□□□ 0.52
THSD4-204ENST00000567745 LOC102724428A0A0B4J2F2 783 aa18.32■□□□□ 0.52
THSD4-204ENST00000567745 SIK1P57059 783 aa18.32■□□□□ 0.52
THSD4-204ENST00000567745 CFAP44Q96MT7 982 aa18.32■□□□□ 0.52
THSD4-204ENST00000567745 MBIPQ9NS73 344 aa18.32■□□□□ 0.52
THSD4-204ENST00000567745 HEG1Q9ULI3 1381 aa18.31■□□□□ 0.52
THSD4-204ENST00000567745 PLSCR1O15162 318 aa18.31■□□□□ 0.52
THSD4-204ENST00000567745 KCNQ3O43525 872 aa18.31■□□□□ 0.52
THSD4-204ENST00000567745 EZH2Q15910 746 aaKnown RBP18.31■□□□□ 0.52
THSD4-204ENST00000567745 WDR63Q8IWG1 891 aa18.31■□□□□ 0.52
THSD4-204ENST00000567745 TSR2Q969E8 191 aaKnown RBP18.31■□□□□ 0.52
THSD4-204ENST00000567745 ZNF496Q96IT1 587 aaPredicted RBP18.31■□□□□ 0.52
THSD4-204ENST00000567745 FMNL2Q96PY5 1086 aa18.31■□□□□ 0.52
THSD4-204ENST00000567745 MYH14Q7Z406 1995 aaKnown RBP18.31■□□□□ 0.52
THSD4-204ENST00000567745 TXNRD1Q16881 649 aa18.3■□□□□ 0.52
THSD4-204ENST00000567745 BABAM1Q9NWV8 329 aa18.3■□□□□ 0.52
THSD4-204ENST00000567745 CHL1O00533 1208 aa18.29■□□□□ 0.52
THSD4-204ENST00000567745 ZNF853P0CG23 659 aa18.29■□□□□ 0.52
THSD4-204ENST00000567745 KCNQ4P56696 695 aa18.29■□□□□ 0.52
THSD4-204ENST00000567745 GOLGA2Q08379 1002 aa18.29■□□□□ 0.52
THSD4-204ENST00000567745 SLC27A3Q5K4L6 730 aa18.29■□□□□ 0.52
THSD4-204ENST00000567745 CAMKK2Q96RR4 588 aa18.29■□□□□ 0.52
THSD4-204ENST00000567745 MYH16Q9H6N6 1097 aa18.29■□□□□ 0.52
THSD4-204ENST00000567745 ATP6V1AP38606 617 aa18.28■□□□□ 0.52
THSD4-204ENST00000567745 SCN7AQ01118 1682 aa18.28■□□□□ 0.52
THSD4-204ENST00000567745 E9PSI1 815 aa18.26■□□□□ 0.51
THSD4-204ENST00000567745 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
THSD4-204ENST00000567745 ITPK1Q13572 414 aa18.26■□□□□ 0.51
THSD4-204ENST00000567745 SLC4A9Q96Q91 983 aa18.26■□□□□ 0.51
THSD4-204ENST00000567745 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
THSD4-204ENST00000567745 BCORQ6W2J9 1755 aa18.26■□□□□ 0.51
THSD4-204ENST00000567745 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
THSD4-204ENST00000567745 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
THSD4-204ENST00000567745 LINC00116Q8NCU8 138 aa18.25■□□□□ 0.51
THSD4-204ENST00000567745 LRRC4BQ9NT99 713 aa18.25■□□□□ 0.51
THSD4-204ENST00000567745 VSIG10Q8N0Z9 540 aa18.24■□□□□ 0.51
THSD4-204ENST00000567745 CDCA7LQ96GN5 454 aa18.24■□□□□ 0.51
THSD4-204ENST00000567745 CASZ1Q86V15 1759 aa18.23■□□□□ 0.51
THSD4-204ENST00000567745 PRAMEF22A3QJZ6 481 aa18.23■□□□□ 0.51
THSD4-204ENST00000567745 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
THSD4-204ENST00000567745 AK7Q96M32 723 aa18.23■□□□□ 0.51
THSD4-204ENST00000567745 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
THSD4-204ENST00000567745 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
THSD4-204ENST00000567745 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms