RNA–Protein interactions for RNA: ENST00000567375.1

NSMCE1-212, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-212ENST00000567375 CABP2Q9NPB3 220 aa11.87□□□□□ -0.51
NSMCE1-212ENST00000567375 PRELPP51888 382 aa11.86□□□□□ -0.51
NSMCE1-212ENST00000567375 CABP1Q9NZU7 370 aa11.86□□□□□ -0.51
NSMCE1-212ENST00000567375 TAF1LQ8IZX4 1826 aa11.86□□□□□ -0.51
NSMCE1-212ENST00000567375 NSD2O96028 1365 aa11.85□□□□□ -0.51
NSMCE1-212ENST00000567375 ZNF467Q7Z7K2 595 aaPredicted RBP11.85□□□□□ -0.51
NSMCE1-212ENST00000567375 PDCD7Q8N8D1 485 aaKnown RBP11.85□□□□□ -0.51
NSMCE1-212ENST00000567375 TTC21AQ8NDW8 1320 aa11.85□□□□□ -0.51
NSMCE1-212ENST00000567375 CENPJQ9HC77 1338 aaPredicted RBP11.85□□□□□ -0.51
NSMCE1-212ENST00000567375 ANKRD36BQ8N2N9 1353 aa11.84□□□□□ -0.51
NSMCE1-212ENST00000567375 SOX12O15370 315 aa11.84□□□□□ -0.51
NSMCE1-212ENST00000567375 COL23A1Q86Y22 540 aaPredicted RBP11.84□□□□□ -0.51
NSMCE1-212ENST00000567375 JMYQ8N9B5 988 aa11.84□□□□□ -0.51
NSMCE1-212ENST00000567375 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
NSMCE1-212ENST00000567375 TTC21BQ7Z4L5 1316 aa11.84□□□□□ -0.51
NSMCE1-212ENST00000567375 TOMM70O94826 608 aa11.83□□□□□ -0.52
NSMCE1-212ENST00000567375 KCNQ4P56696 695 aa11.83□□□□□ -0.52
NSMCE1-212ENST00000567375 MSL1Q68DK7 614 aa11.83□□□□□ -0.52
NSMCE1-212ENST00000567375 TNS4Q8IZW8 715 aa11.83□□□□□ -0.52
NSMCE1-212ENST00000567375 NLRP2Q9NX02 1062 aa11.83□□□□□ -0.52
NSMCE1-212ENST00000567375 PCDH10Q9P2E7 1040 aa11.83□□□□□ -0.52
NSMCE1-212ENST00000567375 TOGARAM1Q9Y4F4 1720 aa11.83□□□□□ -0.52
NSMCE1-212ENST00000567375 IGSF1Q8N6C5 1336 aa11.82□□□□□ -0.52
NSMCE1-212ENST00000567375 PCNTO95613 3336 aa11.81□□□□□ -0.52
NSMCE1-212ENST00000567375 KLRG1Q96E93 195 aa11.81□□□□□ -0.52
NSMCE1-212ENST00000567375 CCNL1Q9UK58 526 aaPredicted RBP11.81□□□□□ -0.52
NSMCE1-212ENST00000567375 KIF13BQ9NQT8 1826 aa11.81□□□□□ -0.52
NSMCE1-212ENST00000567375 UBR3Q6ZT12 1888 aa11.8□□□□□ -0.52
NSMCE1-212ENST00000567375 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
NSMCE1-212ENST00000567375 SPOCK2Q92563 424 aa11.8□□□□□ -0.52
NSMCE1-212ENST00000567375 SLC34A2O95436 690 aa11.79□□□□□ -0.52
NSMCE1-212ENST00000567375 PSEN1P49768 467 aa11.79□□□□□ -0.52
NSMCE1-212ENST00000567375 C4BP0C0L5 1744 aa11.79□□□□□ -0.52
NSMCE1-212ENST00000567375 USP31Q70CQ4 1352 aa11.79□□□□□ -0.52
NSMCE1-212ENST00000567375 PKD1L3Q7Z443 1732 aa11.78□□□□□ -0.52
NSMCE1-212ENST00000567375 ST18O60284 1047 aa11.78□□□□□ -0.52
NSMCE1-212ENST00000567375 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
NSMCE1-212ENST00000567375 ANKRD24Q8TF21 1146 aa11.78□□□□□ -0.52
NSMCE1-212ENST00000567375 SYTL4Q96C24 671 aaPredicted RBP11.78□□□□□ -0.52
NSMCE1-212ENST00000567375 RAB3GAP2Q9H2M9 1393 aa11.78□□□□□ -0.52
NSMCE1-212ENST00000567375 NBPF1Q3BBV0 1214 aa11.77□□□□□ -0.53
NSMCE1-212ENST00000567375 FLAD1Q8NFF5 587 aa11.77□□□□□ -0.53
NSMCE1-212ENST00000567375 RBM46Q8TBY0 533 aaKnown RBP11.77□□□□□ -0.53
NSMCE1-212ENST00000567375 DDX54Q8TDD1 881 aaKnown RBP11.77□□□□□ -0.53
NSMCE1-212ENST00000567375 KTN1Q86UP2 1357 aaKnown RBP11.77□□□□□ -0.53
NSMCE1-212ENST00000567375 USP47Q96K76 1375 aa11.77□□□□□ -0.53
NSMCE1-212ENST00000567375 BRCA1P38398 1863 aaKnown RBP11.76□□□□□ -0.53
NSMCE1-212ENST00000567375 TNRC6CQ9HCJ0 1690 aaKnown RBP11.76□□□□□ -0.53
NSMCE1-212ENST00000567375 WWC3Q9ULE0 1092 aa11.76□□□□□ -0.53
NSMCE1-212ENST00000567375 EVC2Q86UK5 1308 aa11.76□□□□□ -0.53
NSMCE1-212ENST00000567375 RGPD2P0DJD1 1756 aa11.75□□□□□ -0.53
NSMCE1-212ENST00000567375 N4BP2Q86UW6 1770 aaPredicted RBP11.75□□□□□ -0.53
NSMCE1-212ENST00000567375 HTRA3P83110 453 aa11.75□□□□□ -0.53
NSMCE1-212ENST00000567375 NMRK2Q9NPI5 230 aa11.75□□□□□ -0.53
NSMCE1-212ENST00000567375 HMGB2P26583 209 aaKnown RBP11.74□□□□□ -0.53
NSMCE1-212ENST00000567375 FSTL1Q12841 308 aa11.74□□□□□ -0.53
NSMCE1-212ENST00000567375 C10orf71Q711Q0 1435 aa11.74□□□□□ -0.53
NSMCE1-212ENST00000567375 NSD3Q9BZ95 1437 aa11.74□□□□□ -0.53
NSMCE1-212ENST00000567375 PXDNLA1KZ92 1463 aa11.74□□□□□ -0.53
NSMCE1-212ENST00000567375 MEGF6O75095 1541 aa11.74□□□□□ -0.53
NSMCE1-212ENST00000567375 ARFGEF1Q9Y6D6 1849 aa11.74□□□□□ -0.53
NSMCE1-212ENST00000567375 PLEKHG2Q9H7P9 1386 aa11.73□□□□□ -0.53
NSMCE1-212ENST00000567375 ITGB4P16144 1822 aa11.72□□□□□ -0.53
NSMCE1-212ENST00000567375 CD163L1Q9NR16 1453 aa11.71□□□□□ -0.53
NSMCE1-212ENST00000567375 PALLDQ8WX93 1383 aa11.71□□□□□ -0.53
NSMCE1-212ENST00000567375 SBNO2Q9Y2G9 1366 aa11.71□□□□□ -0.53
NSMCE1-212ENST00000567375 PDAP1Q13442 181 aaKnown RBP11.71□□□□□ -0.53
NSMCE1-212ENST00000567375 CIZ1Q9ULV3 898 aaPredicted RBP11.71□□□□□ -0.53
NSMCE1-212ENST00000567375 MAP2P11137 1827 aaKnown RBP11.71□□□□□ -0.54
NSMCE1-212ENST00000567375 NME9Q86XW9 330 aa11.7□□□□□ -0.54
NSMCE1-212ENST00000567375 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
NSMCE1-212ENST00000567375 ZCRB1Q8TBF4 217 aaKnown RBP11.7□□□□□ -0.54
NSMCE1-212ENST00000567375 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-212ENST00000567375 AMIGO3Q86WK7 504 aa11.69□□□□□ -0.54
NSMCE1-212ENST00000567375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.69□□□□□ -0.54
NSMCE1-212ENST00000567375 KCPQ6ZWJ8 1503 aa11.69□□□□□ -0.54
NSMCE1-212ENST00000567375 HSPA1AP0DMV8 641 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-212ENST00000567375 HSPA1BP0DMV9 641 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-212ENST00000567375 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
NSMCE1-212ENST00000567375 IP6K1Q92551 441 aa11.68□□□□□ -0.54
NSMCE1-212ENST00000567375 AK7Q96M32 723 aa11.68□□□□□ -0.54
NSMCE1-212ENST00000567375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.68□□□□□ -0.54
NSMCE1-212ENST00000567375 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-212ENST00000567375 EDC4Q6P2E9 1401 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-212ENST00000567375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.67□□□□□ -0.54
NSMCE1-212ENST00000567375 SSFA2P28290 1259 aa11.67□□□□□ -0.54
NSMCE1-212ENST00000567375 SBF1O95248 1867 aa11.67□□□□□ -0.54
NSMCE1-212ENST00000567375 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
NSMCE1-212ENST00000567375 CGNL1Q0VF96 1302 aa11.66□□□□□ -0.54
NSMCE1-212ENST00000567375 KDM2BQ8NHM5 1336 aa11.66□□□□□ -0.54
NSMCE1-212ENST00000567375 PHF14O94880 888 aa11.66□□□□□ -0.54
NSMCE1-212ENST00000567375 TGFB2P61812 414 aa11.66□□□□□ -0.54
NSMCE1-212ENST00000567375 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
NSMCE1-212ENST00000567375 LTV1Q96GA3 475 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-212ENST00000567375 BCS1LQ9Y276 419 aa11.66□□□□□ -0.54
NSMCE1-212ENST00000567375 SMC1BQ8NDV3 1235 aa11.65□□□□□ -0.54
NSMCE1-212ENST00000567375 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
NSMCE1-212ENST00000567375 C9orf131Q5VYM1 1079 aa11.64□□□□□ -0.55
NSMCE1-212ENST00000567375 ARHGAP27Q6ZUM4 889 aa11.64□□□□□ -0.55
NSMCE1-212ENST00000567375 MMP10P09238 476 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms