RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 RGS22Q8NE09 1264 aa14.6□□□□□ -0.07
CDH11-212ENST00000566827 PDGFDQ9GZP0 370 aaPredicted RBP14.6□□□□□ -0.07
CDH11-212ENST00000566827 NCAPD2Q15021 1401 aa14.58□□□□□ -0.07
CDH11-212ENST00000566827 MTHFSDQ2M296 383 aaKnown RBP14.58□□□□□ -0.08
CDH11-212ENST00000566827 PRKAR2BP31323 418 aa14.58□□□□□ -0.08
CDH11-212ENST00000566827 CCDC146Q8IYE0 955 aa14.58□□□□□ -0.08
CDH11-212ENST00000566827 LGR6Q9HBX8 967 aa14.58□□□□□ -0.08
CDH11-212ENST00000566827 MTMR7Q9Y216 660 aa14.58□□□□□ -0.08
CDH11-212ENST00000566827 ZNF530Q6P9A1 599 aaPredicted RBP14.57□□□□□ -0.08
CDH11-212ENST00000566827 DHX37Q8IY37 1157 aaKnown RBP14.57□□□□□ -0.08
CDH11-212ENST00000566827 BTAF1O14981 1849 aa14.57□□□□□ -0.08
CDH11-212ENST00000566827 DCTN1Q14203 1278 aa14.56□□□□□ -0.08
CDH11-212ENST00000566827 CDCA7Q9BWT1 371 aaPredicted RBP14.56□□□□□ -0.08
CDH11-212ENST00000566827 PHKG2P15735 406 aa14.56□□□□□ -0.08
CDH11-212ENST00000566827 SF3B2Q13435 895 aaKnown RBP14.56□□□□□ -0.08
CDH11-212ENST00000566827 KDRP35968 1356 aa14.56□□□□□ -0.08
CDH11-212ENST00000566827 PKD1L3Q7Z443 1732 aa14.55□□□□□ -0.08
CDH11-212ENST00000566827 LRRC4BQ9NT99 713 aa14.55□□□□□ -0.08
CDH11-212ENST00000566827 CAMKK2Q96RR4 588 aa14.55□□□□□ -0.08
CDH11-212ENST00000566827 ANO8Q9HCE9 1232 aaPredicted RBP14.55□□□□□ -0.08
CDH11-212ENST00000566827 ITGB4P16144 1822 aa14.54□□□□□ -0.08
CDH11-212ENST00000566827 RRP7AQ9Y3A4 280 aaKnown RBP14.54□□□□□ -0.08
CDH11-212ENST00000566827 PCDH11XQ9BZA7 1347 aa14.54□□□□□ -0.08
CDH11-212ENST00000566827 PCDH11YQ9BZA8 1340 aa14.54□□□□□ -0.08
CDH11-212ENST00000566827 KDM6AO15550 1401 aaPredicted RBP14.54□□□□□ -0.08
CDH11-212ENST00000566827 NKX1-1Q15270 411 aaPredicted RBP14.54□□□□□ -0.08
CDH11-212ENST00000566827 PIGBQ92521 554 aa14.54□□□□□ -0.08
CDH11-212ENST00000566827 THUMPD2Q9BTF0 503 aaKnown RBP14.54□□□□□ -0.08
CDH11-212ENST00000566827 ASAP1Q9ULH1 1129 aa14.54□□□□□ -0.08
CDH11-212ENST00000566827 BCL11BQ9C0K0 894 aaPredicted RBP14.53□□□□□ -0.08
CDH11-212ENST00000566827 FOXD4L5Q5VV16 416 aaPredicted RBP14.53□□□□□ -0.08
CDH11-212ENST00000566827 ZC3H15Q8WU90 426 aaKnown RBP14.53□□□□□ -0.08
CDH11-212ENST00000566827 FOXD4L4Q8WXT5 416 aaPredicted RBP14.53□□□□□ -0.08
CDH11-212ENST00000566827 MYBBP1AQ9BQG0 1328 aaKnown RBP14.53□□□□□ -0.08
CDH11-212ENST00000566827 BAG6P46379 1132 aa14.52□□□□□ -0.08
CDH11-212ENST00000566827 R3HDM1Q15032 1099 aaKnown RBP14.52□□□□□ -0.08
CDH11-212ENST00000566827 NFATC2IPQ8NCF5 419 aa14.52□□□□□ -0.09
CDH11-212ENST00000566827 CFAP53Q96M91 514 aa14.52□□□□□ -0.09
CDH11-212ENST00000566827 SPG7Q9UQ90 795 aa14.52□□□□□ -0.09
CDH11-212ENST00000566827 SLC39A6Q13433 755 aa14.51□□□□□ -0.09
CDH11-212ENST00000566827 VIRMAQ69YN4 1812 aaKnown RBP14.51□□□□□ -0.09
CDH11-212ENST00000566827 MCM10Q7L590 875 aa14.51□□□□□ -0.09
CDH11-212ENST00000566827 AMIGO3Q86WK7 504 aa14.51□□□□□ -0.09
CDH11-212ENST00000566827 ADAMTS8Q9UP79 889 aa14.51□□□□□ -0.09
CDH11-212ENST00000566827 RALBP1Q15311 655 aa14.51□□□□□ -0.09
CDH11-212ENST00000566827 IFNL2Q8IZJ0 200 aa14.51□□□□□ -0.09
CDH11-212ENST00000566827 NHSQ6T4R5 1651 aa14.5□□□□□ -0.09
CDH11-212ENST00000566827 RBM25P49756 843 aaKnown RBP14.5□□□□□ -0.09
CDH11-212ENST00000566827 TXNRD1Q16881 649 aa14.5□□□□□ -0.09
CDH11-212ENST00000566827 MIS18AQ9NYP9 233 aa14.49□□□□□ -0.09
CDH11-212ENST00000566827 PTCD1O75127 700 aaKnown RBP14.49□□□□□ -0.09
CDH11-212ENST00000566827 PLEKHO1Q53GL0 409 aaPredicted RBP14.49□□□□□ -0.09
CDH11-212ENST00000566827 IL17REQ8NFR9 667 aa14.48□□□□□ -0.09
CDH11-212ENST00000566827 SLC4A9Q96Q91 983 aa14.48□□□□□ -0.09
CDH11-212ENST00000566827 C1orf141Q5JVX7 400 aa14.47□□□□□ -0.09
CDH11-212ENST00000566827 SALL2Q9Y467 1007 aaPredicted RBP14.47□□□□□ -0.09
CDH11-212ENST00000566827 DLG5Q8TDM6 1919 aa14.47□□□□□ -0.09
CDH11-212ENST00000566827 KCNQ3O43525 872 aa14.47□□□□□ -0.09
CDH11-212ENST00000566827 ZNF827Q17R98 1081 aa14.47□□□□□ -0.09
CDH11-212ENST00000566827 PLEKHF1Q96S99 279 aa14.47□□□□□ -0.09
CDH11-212ENST00000566827 HS6ST3Q8IZP7 471 aa14.46□□□□□ -0.09
CDH11-212ENST00000566827 NUP188Q5SRE5 1749 aa14.46□□□□□ -0.09
CDH11-212ENST00000566827 ANP32CO43423 234 aa14.46□□□□□ -0.1
CDH11-212ENST00000566827 CCDC125Q86Z20 511 aa14.46□□□□□ -0.1
CDH11-212ENST00000566827 TMOD3Q9NYL9 352 aa14.46□□□□□ -0.1
CDH11-212ENST00000566827 NUDCQ9Y266 331 aa14.46□□□□□ -0.1
CDH11-212ENST00000566827 BCL9O00512 1426 aa14.45□□□□□ -0.1
CDH11-212ENST00000566827 DIEXFQ68CQ4 756 aaKnown RBP14.45□□□□□ -0.1
CDH11-212ENST00000566827 MRS2Q9HD23 443 aa14.45□□□□□ -0.1
CDH11-212ENST00000566827 ATG3Q9NT62 314 aa14.45□□□□□ -0.1
CDH11-212ENST00000566827 GTPBP6O43824 516 aaPredicted RBP14.45□□□□□ -0.1
CDH11-212ENST00000566827 BCL11AQ9H165 835 aa14.45□□□□□ -0.1
CDH11-212ENST00000566827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDH11-212ENST00000566827 PALLDQ8WX93 1383 aa14.44□□□□□ -0.1
CDH11-212ENST00000566827 RBM42Q9BTD8 480 aaKnown RBP14.44□□□□□ -0.1
CDH11-212ENST00000566827 PRAMEF22A3QJZ6 481 aa14.44□□□□□ -0.1
CDH11-212ENST00000566827 CABP4P57796 275 aa14.44□□□□□ -0.1
CDH11-212ENST00000566827 ITPK1Q13572 414 aa14.44□□□□□ -0.1
CDH11-212ENST00000566827 FAM9BQ8IZU0 186 aa14.44□□□□□ -0.1
CDH11-212ENST00000566827 DCAF5Q96JK2 942 aa14.44□□□□□ -0.1
CDH11-212ENST00000566827 SCN11AQ9UI33 1791 aa14.43□□□□□ -0.1
CDH11-212ENST00000566827 PLSCR1O15162 318 aa14.43□□□□□ -0.1
CDH11-212ENST00000566827 RNMTO43148 476 aaKnown RBP14.43□□□□□ -0.1
CDH11-212ENST00000566827 AMOTQ4VCS5 1084 aa14.43□□□□□ -0.1
CDH11-212ENST00000566827 CCNL1Q9UK58 526 aaPredicted RBP14.43□□□□□ -0.1
CDH11-212ENST00000566827 FCHSD2O94868 740 aa14.42□□□□□ -0.1
CDH11-212ENST00000566827 PIP4K2AP48426 406 aaPredicted RBP14.42□□□□□ -0.1
CDH11-212ENST00000566827 AKAP4Q5JQC9 854 aa14.42□□□□□ -0.1
CDH11-212ENST00000566827 MIER1Q8N108 512 aa14.42□□□□□ -0.1
CDH11-212ENST00000566827 RREB1Q92766 1687 aa14.42□□□□□ -0.1
CDH11-212ENST00000566827 CCDC82Q8N4S0 544 aa14.41□□□□□ -0.1
CDH11-212ENST00000566827 GNAT3A8MTJ3 354 aa14.41□□□□□ -0.1
CDH11-212ENST00000566827 WDR43Q15061 677 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDH11-212ENST00000566827 MAP3K5Q99683 1374 aa14.41□□□□□ -0.1
CDH11-212ENST00000566827 PHF14O94880 888 aa14.4□□□□□ -0.1
CDH11-212ENST00000566827 KCNV2Q8TDN2 545 aa14.4□□□□□ -0.1
CDH11-212ENST00000566827 APAF1O14727 1248 aa14.4□□□□□ -0.1
CDH11-212ENST00000566827 ZBTB7AO95365 584 aa14.4□□□□□ -0.1
CDH11-212ENST00000566827 LINC00116Q8NCU8 138 aa14.4□□□□□ -0.1
CDH11-212ENST00000566827 SLC52A2Q9HAB3 445 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms