RNA–Protein interactions for RNA: ENST00000566640.1

SIN3A-207, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 944 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-207ENST00000566640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.87□□□□□ -0.83
SIN3A-207ENST00000566640 PUS7Q96PZ0 661 aaKnown RBP9.87□□□□□ -0.83
SIN3A-207ENST00000566640 SLC12A5Q9H2X9 1139 aa9.87□□□□□ -0.83
SIN3A-207ENST00000566640 EDC4Q6P2E9 1401 aaKnown RBP9.87□□□□□ -0.83
SIN3A-207ENST00000566640 A0A1W2PP64 1363 aa9.87□□□□□ -0.83
SIN3A-207ENST00000566640 USP54Q70EL1 1684 aa9.87□□□□□ -0.83
SIN3A-207ENST00000566640 EXOC5O00471 708 aa9.86□□□□□ -0.83
SIN3A-207ENST00000566640 DPY19L2Q6NUT2 758 aa9.86□□□□□ -0.83
SIN3A-207ENST00000566640 MON2Q7Z3U7 1717 aa9.86□□□□□ -0.83
SIN3A-207ENST00000566640 PDGFDQ9GZP0 370 aaPredicted RBP9.86□□□□□ -0.83
SIN3A-207ENST00000566640 NINLQ9Y2I6 1382 aa9.86□□□□□ -0.83
SIN3A-207ENST00000566640 WNK3Q9BYP7 1800 aa9.85□□□□□ -0.83
SIN3A-207ENST00000566640 TXNRD1Q16881 649 aa9.85□□□□□ -0.83
SIN3A-207ENST00000566640 TESK2Q96S53 571 aa9.85□□□□□ -0.83
SIN3A-207ENST00000566640 USP47Q96K76 1375 aa9.85□□□□□ -0.83
SIN3A-207ENST00000566640 IL2RBP14784 551 aa9.84□□□□□ -0.83
SIN3A-207ENST00000566640 HDGFL2Q7Z4V5 671 aaPredicted RBP9.84□□□□□ -0.83
SIN3A-207ENST00000566640 CASZ1Q86V15 1759 aa9.83□□□□□ -0.84
SIN3A-207ENST00000566640 PTGER2P43116 358 aa9.83□□□□□ -0.84
SIN3A-207ENST00000566640 TMC1Q8TDI8 760 aa9.83□□□□□ -0.84
SIN3A-207ENST00000566640 ANKRD24Q8TF21 1146 aa9.83□□□□□ -0.84
SIN3A-207ENST00000566640 KRTAP3-3Q9BYR6 98 aa9.83□□□□□ -0.84
SIN3A-207ENST00000566640 KRTAP3-2Q9BYR7 98 aa9.83□□□□□ -0.84
SIN3A-207ENST00000566640 NLRP2Q9NX02 1062 aa9.83□□□□□ -0.84
SIN3A-207ENST00000566640 TERF2IPQ9NYB0 399 aa9.83□□□□□ -0.84
SIN3A-207ENST00000566640 PPP1R1BQ9UD71 204 aaPredicted RBP9.83□□□□□ -0.84
SIN3A-207ENST00000566640 SBF2Q86WG5 1849 aa9.82□□□□□ -0.84
SIN3A-207ENST00000566640 SLC15A2Q16348 729 aa9.82□□□□□ -0.84
SIN3A-207ENST00000566640 CLSPNQ9HAW4 1339 aa9.82□□□□□ -0.84
SIN3A-207ENST00000566640 MYOM1P52179 1685 aa9.81□□□□□ -0.84
SIN3A-207ENST00000566640 ST20-MTHFSA0A0A6YYL1 179 aa9.81□□□□□ -0.84
SIN3A-207ENST00000566640 ZBTB7AO95365 584 aa9.81□□□□□ -0.84
SIN3A-207ENST00000566640 IP6K1Q92551 441 aa9.81□□□□□ -0.84
SIN3A-207ENST00000566640 STK32BQ9NY57 414 aa9.81□□□□□ -0.84
SIN3A-207ENST00000566640 NHSQ6T4R5 1651 aa9.8□□□□□ -0.84
SIN3A-207ENST00000566640 G3V3G9 751 aa9.8□□□□□ -0.84
SIN3A-207ENST00000566640 PRKCSHP14314 528 aaPredicted RBP9.8□□□□□ -0.84
SIN3A-207ENST00000566640 YY1P25490 414 aa9.8□□□□□ -0.84
SIN3A-207ENST00000566640 MICALL2Q8IY33 904 aa9.8□□□□□ -0.84
SIN3A-207ENST00000566640 ACSBG1Q96GR2 724 aa9.8□□□□□ -0.84
SIN3A-207ENST00000566640 PAPPAQ13219 1627 aa9.8□□□□□ -0.84
SIN3A-207ENST00000566640 MAP3K19Q56UN5 1328 aa9.8□□□□□ -0.84
SIN3A-207ENST00000566640 RGPD5Q99666 1765 aa9.79□□□□□ -0.84
SIN3A-207ENST00000566640 SNPHO15079 494 aa9.79□□□□□ -0.84
SIN3A-207ENST00000566640 MTFR1LQ9H019 292 aa9.79□□□□□ -0.84
SIN3A-207ENST00000566640 LRRC4BQ9NT99 713 aa9.79□□□□□ -0.84
SIN3A-207ENST00000566640 BOLA1Q9Y3E2 137 aa9.79□□□□□ -0.84
SIN3A-207ENST00000566640 LTN1O94822 1766 aa9.78□□□□□ -0.84
SIN3A-207ENST00000566640 ANKRD36BQ8N2N9 1353 aa9.78□□□□□ -0.84
SIN3A-207ENST00000566640 HOXC9P31274 260 aa9.78□□□□□ -0.84
SIN3A-207ENST00000566640 ZNF827Q17R98 1081 aa9.78□□□□□ -0.84
SIN3A-207ENST00000566640 L3MBTL3Q96JM7 780 aaPredicted RBP9.78□□□□□ -0.84
SIN3A-207ENST00000566640 KIF20BQ96Q89 1820 aa9.77□□□□□ -0.84
SIN3A-207ENST00000566640 UTRNP46939 3433 aa9.77□□□□□ -0.85
SIN3A-207ENST00000566640 FBLN1P23142 703 aa9.77□□□□□ -0.85
SIN3A-207ENST00000566640 COG3Q96JB2 828 aa9.77□□□□□ -0.85
SIN3A-207ENST00000566640 SYT17Q9BSW7 474 aa9.77□□□□□ -0.85
SIN3A-207ENST00000566640 FHDC1Q9C0D6 1143 aaPredicted RBP9.77□□□□□ -0.85
SIN3A-207ENST00000566640 RTL1A6NKG5 1358 aa9.76□□□□□ -0.85
SIN3A-207ENST00000566640 NSD2O96028 1365 aa9.76□□□□□ -0.85
SIN3A-207ENST00000566640 MAP3K5Q99683 1374 aa9.76□□□□□ -0.85
SIN3A-207ENST00000566640 POTEB3A0JP26 581 aa9.76□□□□□ -0.85
SIN3A-207ENST00000566640 SLC27A3Q5K4L6 730 aa9.76□□□□□ -0.85
SIN3A-207ENST00000566640 POTEBQ6S5H4 581 aa9.76□□□□□ -0.85
SIN3A-207ENST00000566640 POLR3GLQ9BT43 218 aa9.76□□□□□ -0.85
SIN3A-207ENST00000566640 MEGF6O75095 1541 aa9.76□□□□□ -0.85
SIN3A-207ENST00000566640 FAM208AQ9UK61 1670 aaKnown RBP9.75□□□□□ -0.85
SIN3A-207ENST00000566640 FYB1O15117 783 aa9.75□□□□□ -0.85
SIN3A-207ENST00000566640 DDX54Q8TDD1 881 aaKnown RBP9.75□□□□□ -0.85
SIN3A-207ENST00000566640 LTV1Q96GA3 475 aaPredicted RBP9.75□□□□□ -0.85
SIN3A-207ENST00000566640 AMPHP49418 695 aa9.74□□□□□ -0.85
SIN3A-207ENST00000566640 TMF1P82094 1093 aa9.74□□□□□ -0.85
SIN3A-207ENST00000566640 NBPF6Q5VWK0 638 aa9.74□□□□□ -0.85
SIN3A-207ENST00000566640 NBPF4Q96M43 638 aa9.74□□□□□ -0.85
SIN3A-207ENST00000566640 TIMELESSQ9UNS1 1208 aa9.74□□□□□ -0.85
SIN3A-207ENST00000566640 PRIM1P49642 420 aaKnown RBP9.73□□□□□ -0.85
SIN3A-207ENST00000566640 RRS1Q15050 365 aaKnown RBP9.73□□□□□ -0.85
SIN3A-207ENST00000566640 ZCRB1Q8TBF4 217 aaKnown RBP9.73□□□□□ -0.85
SIN3A-207ENST00000566640 ARXQ96QS3 562 aa9.73□□□□□ -0.85
SIN3A-207ENST00000566640 GGNBP2Q9H3C7 697 aa9.73□□□□□ -0.85
SIN3A-207ENST00000566640 PNPLA7Q6ZV29 1317 aa9.73□□□□□ -0.85
SIN3A-207ENST00000566640 EMP3P54852 163 aa9.72□□□□□ -0.85
SIN3A-207ENST00000566640 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
SIN3A-207ENST00000566640 CRISPLD2Q9H0B8 497 aa9.72□□□□□ -0.85
SIN3A-207ENST00000566640 CGNL1Q0VF96 1302 aa9.72□□□□□ -0.85
SIN3A-207ENST00000566640 BTAF1O14981 1849 aa9.72□□□□□ -0.85
SIN3A-207ENST00000566640 INSRP06213 1382 aa9.72□□□□□ -0.85
SIN3A-207ENST00000566640 KIF24Q5T7B8 1368 aa9.72□□□□□ -0.85
SIN3A-207ENST00000566640 HSPA5P11021 654 aaKnown RBP9.71□□□□□ -0.86
SIN3A-207ENST00000566640 KCNQ4P56696 695 aa9.71□□□□□ -0.86
SIN3A-207ENST00000566640 SYTL4Q96C24 671 aaPredicted RBP9.71□□□□□ -0.86
SIN3A-207ENST00000566640 GOLGB1Q14789 3259 aaKnown RBP9.7□□□□□ -0.86
SIN3A-207ENST00000566640 HSP90AB2PQ58FF8 381 aa9.7□□□□□ -0.86
SIN3A-207ENST00000566640 C3orf67Q6ZVT6 689 aa9.7□□□□□ -0.86
SIN3A-207ENST00000566640 USHBP1Q8N6Y0 703 aa9.7□□□□□ -0.86
SIN3A-207ENST00000566640 ZNF784Q8NCA9 323 aaPredicted RBP9.7□□□□□ -0.86
SIN3A-207ENST00000566640 HS3ST6Q96QI5 342 aa9.7□□□□□ -0.86
SIN3A-207ENST00000566640 CARD14Q9BXL6 1004 aa9.7□□□□□ -0.86
SIN3A-207ENST00000566640 FLT4P35916 1363 aa9.7□□□□□ -0.86
SIN3A-207ENST00000566640 NCAPD2Q15021 1401 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms