RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 IL17REQ8NFR9 667 aa34.54■■■■□ 3.12
NME3-209ENST00000566600 ASAP1Q9ULH1 1129 aa34.53■■■■□ 3.12
NME3-209ENST00000566600 TEFQ10587 303 aa34.52■■■■□ 3.12
NME3-209ENST00000566600 ATG3Q9NT62 314 aa34.52■■■■□ 3.12
NME3-209ENST00000566600 CEMIPQ8WUJ3 1361 aa34.51■■■■□ 3.12
NME3-209ENST00000566600 CCDC146Q8IYE0 955 aa34.51■■■■□ 3.12
NME3-209ENST00000566600 PNISRQ8TF01 805 aaKnown RBP34.51■■■■□ 3.12
NME3-209ENST00000566600 CCNL1Q9UK58 526 aaPredicted RBP34.51■■■■□ 3.12
NME3-209ENST00000566600 DIEXFQ68CQ4 756 aaKnown RBP34.49■■■■□ 3.11
NME3-209ENST00000566600 LRRC4BQ9NT99 713 aa34.48■■■■□ 3.11
NME3-209ENST00000566600 DLG5Q8TDM6 1919 aa34.46■■■■□ 3.11
NME3-209ENST00000566600 TMPOP42166 694 aaKnown RBP34.46■■■■□ 3.11
NME3-209ENST00000566600 RIPK4P57078 832 aa34.45■■■■□ 3.11
NME3-209ENST00000566600 MCM10Q7L590 875 aa34.45■■■■□ 3.11
NME3-209ENST00000566600 LOC102724428A0A0B4J2F2 783 aa34.44■■■■□ 3.1
NME3-209ENST00000566600 SIK1P57059 783 aa34.44■■■■□ 3.1
NME3-209ENST00000566600 LMOD3Q0VAK6 560 aa34.44■■■■□ 3.1
NME3-209ENST00000566600 STK32BQ9NY57 414 aa34.44■■■■□ 3.1
NME3-209ENST00000566600 PAPPAQ13219 1627 aa34.41■■■■□ 3.1
NME3-209ENST00000566600 RBM42Q9BTD8 480 aaKnown RBP34.41■■■■□ 3.1
NME3-209ENST00000566600 SIPA1L3O60292 1781 aaPredicted RBP34.41■■■■□ 3.1
NME3-209ENST00000566600 KCNQ4P56696 695 aa34.4■■■■□ 3.1
NME3-209ENST00000566600 DCTN1Q14203 1278 aa34.4■■■■□ 3.1
NME3-209ENST00000566600 ATP6V1AP38606 617 aa34.39■■■■□ 3.1
NME3-209ENST00000566600 R3HDM1Q15032 1099 aaKnown RBP34.39■■■■□ 3.1
NME3-209ENST00000566600 ANO8Q9HCE9 1232 aaPredicted RBP34.39■■■■□ 3.1
NME3-209ENST00000566600 SLC15A2Q16348 729 aa34.38■■■■□ 3.09
NME3-209ENST00000566600 TTC5Q8N0Z6 440 aa34.38■■■■□ 3.09
NME3-209ENST00000566600 ZNF831Q5JPB2 1677 aa34.38■■■■□ 3.09
NME3-209ENST00000566600 CCER2I3L3R5 266 aa34.37■■■■□ 3.09
NME3-209ENST00000566600 RRP7AQ9Y3A4 280 aaKnown RBP34.37■■■■□ 3.09
NME3-209ENST00000566600 C5P01031 1676 aa34.37■■■■□ 3.09
NME3-209ENST00000566600 BTBD11A6QL63 1104 aa34.36■■■■□ 3.09
NME3-209ENST00000566600 PTCD1O75127 700 aaKnown RBP34.36■■■■□ 3.09
NME3-209ENST00000566600 SLC39A6Q13433 755 aa34.36■■■■□ 3.09
NME3-209ENST00000566600 NEUROD2Q15784 382 aa34.36■■■■□ 3.09
NME3-209ENST00000566600 PSDA5PKW4 1024 aaPredicted RBP34.35■■■■□ 3.09
NME3-209ENST00000566600 TAF7Q15545 349 aaPredicted RBP34.35■■■■□ 3.09
NME3-209ENST00000566600 APAF1O14727 1248 aa34.34■■■■□ 3.09
NME3-209ENST00000566600 AKT1S1Q96B36 256 aa34.34■■■■□ 3.09
NME3-209ENST00000566600 TAF1LQ8IZX4 1826 aa34.34■■■■□ 3.09
NME3-209ENST00000566600 ZNF790Q6PG37 636 aa34.33■■■■□ 3.09
NME3-209ENST00000566600 ITPK1Q13572 414 aa34.31■■■■□ 3.08
NME3-209ENST00000566600 ZNF827Q17R98 1081 aa34.31■■■■□ 3.08
NME3-209ENST00000566600 FAM9BQ8IZU0 186 aa34.31■■■■□ 3.08
NME3-209ENST00000566600 SLC4A9Q96Q91 983 aa34.31■■■■□ 3.08
NME3-209ENST00000566600 KCPQ6ZWJ8 1503 aa34.3■■■■□ 3.08
NME3-209ENST00000566600 UBR2Q8IWV8 1755 aa34.29■■■■□ 3.08
NME3-209ENST00000566600 VSIG10Q8N0Z9 540 aa34.29■■■■□ 3.08
NME3-209ENST00000566600 THUMPD2Q9BTF0 503 aaKnown RBP34.29■■■■□ 3.08
NME3-209ENST00000566600 C4BP0C0L5 1744 aa34.28■■■■□ 3.08
NME3-209ENST00000566600 LINC00116Q8NCU8 138 aa34.28■■■■□ 3.08
NME3-209ENST00000566600 TFCP2L1Q9NZI6 479 aa34.28■■■■□ 3.08
NME3-209ENST00000566600 TRIM35Q9UPQ4 493 aa34.28■■■■□ 3.08
NME3-209ENST00000566600 CICQ96RK0 1608 aaPredicted RBP34.27■■■■□ 3.08
NME3-209ENST00000566600 AK7Q96M32 723 aa34.26■■■■□ 3.08
NME3-209ENST00000566600 FMNL2Q96PY5 1086 aa34.26■■■■□ 3.08
NME3-209ENST00000566600 ZNF496Q96IT1 587 aaPredicted RBP34.24■■■■□ 3.07
NME3-209ENST00000566600 QSER1Q2KHR3 1735 aa34.24■■■■□ 3.07
NME3-209ENST00000566600 BABAM1Q9NWV8 329 aa34.23■■■■□ 3.07
NME3-209ENST00000566600 COL5A3P25940 1745 aaPredicted RBP34.22■■■■□ 3.07
NME3-209ENST00000566600 NCBP3Q53F19 620 aaKnown RBP34.22■■■■□ 3.07
NME3-209ENST00000566600 RC3H1Q5TC82 1133 aaKnown RBP34.22■■■■□ 3.07
NME3-209ENST00000566600 TEX13AQ9BXU3 409 aaPredicted RBP34.22■■■■□ 3.07
NME3-209ENST00000566600 HEG1Q9ULI3 1381 aa34.22■■■■□ 3.07
NME3-209ENST00000566600 TJP1Q07157 1748 aa34.21■■■■□ 3.07
NME3-209ENST00000566600 CALD1Q05682 793 aaKnown RBP34.21■■■■□ 3.07
NME3-209ENST00000566600 MIER1Q8N108 512 aa34.21■■■■□ 3.07
NME3-209ENST00000566600 FLAD1Q8NFF5 587 aa34.21■■■■□ 3.07
NME3-209ENST00000566600 CNTNAP4Q9C0A0 1308 aa34.21■■■■□ 3.07
NME3-209ENST00000566600 KCNQ3O43525 872 aa34.2■■■■□ 3.07
NME3-209ENST00000566600 DNAJC10Q8IXB1 793 aa34.2■■■■□ 3.07
NME3-209ENST00000566600 MIS18AQ9NYP9 233 aa34.2■■■■□ 3.07
NME3-209ENST00000566600 KDM3BQ7LBC6 1761 aa34.18■■■■□ 3.06
NME3-209ENST00000566600 CCDC27Q2M243 656 aa34.17■■■■□ 3.06
NME3-209ENST00000566600 PNPLA7Q6ZV29 1317 aa34.17■■■■□ 3.06
NME3-209ENST00000566600 TSPYL4Q9UJ04 414 aa34.17■■■■□ 3.06
NME3-209ENST00000566600 TUBGCP6Q96RT7 1819 aa34.16■■■■□ 3.06
NME3-209ENST00000566600 CASZ1Q86V15 1759 aa34.16■■■■□ 3.06
NME3-209ENST00000566600 GNPATO15228 680 aa34.16■■■■□ 3.06
NME3-209ENST00000566600 STARD3NLO95772 234 aa34.16■■■■□ 3.06
NME3-209ENST00000566600 SSFA2P28290 1259 aa34.15■■■■□ 3.06
NME3-209ENST00000566600 CRKLP46109 303 aaKnown RBP34.15■■■■□ 3.06
NME3-209ENST00000566600 CYP19A1P11511 503 aaPredicted RBP34.14■■■■□ 3.06
NME3-209ENST00000566600 NGEFQ8N5V2 710 aa34.14■■■■□ 3.06
NME3-209ENST00000566600 UBR3Q6ZT12 1888 aa34.14■■■■□ 3.06
NME3-209ENST00000566600 SNRPA1P09661 255 aaKnown RBP34.13■■■■□ 3.05
NME3-209ENST00000566600 SLC16A10Q8TF71 515 aa34.13■■■■□ 3.05
NME3-209ENST00000566600 RTCBQ9Y3I0 505 aaKnown RBP34.13■■■■□ 3.05
NME3-209ENST00000566600 CHL1O00533 1208 aa34.12■■■■□ 3.05
NME3-209ENST00000566600 PDGFDQ9GZP0 370 aaPredicted RBP34.12■■■■□ 3.05
NME3-209ENST00000566600 CCDC87Q9NVE4 849 aa34.12■■■■□ 3.05
NME3-209ENST00000566600 RPS6KA4O75676 772 aa34.11■■■■□ 3.05
NME3-209ENST00000566600 CFAP44Q96MT7 982 aa34.11■■■■□ 3.05
NME3-209ENST00000566600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.1■■■■□ 3.05
NME3-209ENST00000566600 EIF4A1P60842 406 aaKnown RBP34.1■■■■□ 3.05
NME3-209ENST00000566600 COL23A1Q86Y22 540 aaPredicted RBP34.1■■■■□ 3.05
NME3-209ENST00000566600 LAS1LQ9Y4W2 734 aaKnown RBP34.1■■■■□ 3.05
NME3-209ENST00000566600 MSH5O43196 834 aa34.09■■■■□ 3.05
NME3-209ENST00000566600 ADRA2BP18089 450 aa34.09■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms