RNA–Protein interactions for RNA: ENST00000566515.5

CCNDBP1-208, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 5

Gene CCNDBP1, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-208ENST00000566515 ATG3Q9NT62 314 aa27.71■■■□□ 2.03
CCNDBP1-208ENST00000566515 MRC1P22897 1456 aa27.71■■■□□ 2.03
CCNDBP1-208ENST00000566515 MCM10Q7L590 875 aa27.7■■■□□ 2.03
CCNDBP1-208ENST00000566515 RTF1Q92541 710 aaKnown RBP27.7■■■□□ 2.03
CCNDBP1-208ENST00000566515 SMARCC1Q92922 1105 aaPredicted RBP27.7■■■□□ 2.03
CCNDBP1-208ENST00000566515 DCTN1Q14203 1278 aa27.7■■■□□ 2.02
CCNDBP1-208ENST00000566515 LRRC4BQ9NT99 713 aa27.7■■■□□ 2.02
CCNDBP1-208ENST00000566515 RRP7AQ9Y3A4 280 aaKnown RBP27.68■■■□□ 2.02
CCNDBP1-208ENST00000566515 CEMIPQ8WUJ3 1361 aa27.68■■■□□ 2.02
CCNDBP1-208ENST00000566515 HTATSF1O43719 755 aaKnown RBP27.67■■■□□ 2.02
CCNDBP1-208ENST00000566515 TMPOP42166 694 aaKnown RBP27.67■■■□□ 2.02
CCNDBP1-208ENST00000566515 TEFQ10587 303 aa27.67■■■□□ 2.02
CCNDBP1-208ENST00000566515 SIPA1L3O60292 1781 aaPredicted RBP27.67■■■□□ 2.02
CCNDBP1-208ENST00000566515 SLC27A3Q5K4L6 730 aa27.67■■■□□ 2.02
CCNDBP1-208ENST00000566515 CCNL1Q9UK58 526 aaPredicted RBP27.67■■■□□ 2.02
CCNDBP1-208ENST00000566515 RIPK4P57078 832 aa27.66■■■□□ 2.02
CCNDBP1-208ENST00000566515 NEUROD2Q15784 382 aa27.66■■■□□ 2.02
CCNDBP1-208ENST00000566515 SLC39A6Q13433 755 aa27.63■■■□□ 2.01
CCNDBP1-208ENST00000566515 LOC102724428A0A0B4J2F2 783 aa27.63■■■□□ 2.01
CCNDBP1-208ENST00000566515 SIK1P57059 783 aa27.63■■■□□ 2.01
CCNDBP1-208ENST00000566515 NBPF14Q5TI25 921 aa27.63■■■□□ 2.01
CCNDBP1-208ENST00000566515 ANO8Q9HCE9 1232 aaPredicted RBP27.63■■■□□ 2.01
CCNDBP1-208ENST00000566515 PAPPAQ13219 1627 aa27.62■■■□□ 2.01
CCNDBP1-208ENST00000566515 FAM9BQ8IZU0 186 aa27.62■■■□□ 2.01
CCNDBP1-208ENST00000566515 RBM42Q9BTD8 480 aaKnown RBP27.62■■■□□ 2.01
CCNDBP1-208ENST00000566515 THUMPD2Q9BTF0 503 aaKnown RBP27.62■■■□□ 2.01
CCNDBP1-208ENST00000566515 APAF1O14727 1248 aa27.61■■■□□ 2.01
CCNDBP1-208ENST00000566515 PTCD1O75127 700 aaKnown RBP27.61■■■□□ 2.01
CCNDBP1-208ENST00000566515 TAF1LQ8IZX4 1826 aa27.61■■■□□ 2.01
CCNDBP1-208ENST00000566515 MIER1Q8N108 512 aa27.6■■■□□ 2.01
CCNDBP1-208ENST00000566515 PSDA5PKW4 1024 aaPredicted RBP27.59■■■□□ 2.01
CCNDBP1-208ENST00000566515 R3HDM1Q15032 1099 aaKnown RBP27.59■■■□□ 2.01
CCNDBP1-208ENST00000566515 C5P01031 1676 aa27.59■■■□□ 2.01
CCNDBP1-208ENST00000566515 SLC4A9Q96Q91 983 aa27.59■■■□□ 2.01
CCNDBP1-208ENST00000566515 ATP6V1AP38606 617 aa27.58■■■□□ 2.01
CCNDBP1-208ENST00000566515 SENP3-EIF4A1A0A087X0R7 540 aa27.57■■■□□ 2
CCNDBP1-208ENST00000566515 BTBD11A6QL63 1104 aa27.57■■■□□ 2
CCNDBP1-208ENST00000566515 CCER2I3L3R5 266 aa27.57■■■□□ 2
CCNDBP1-208ENST00000566515 LMOD3Q0VAK6 560 aa27.56■■■□□ 2
CCNDBP1-208ENST00000566515 STK32BQ9NY57 414 aa27.56■■■□□ 2
CCNDBP1-208ENST00000566515 TRIM35Q9UPQ4 493 aa27.56■■■□□ 2
CCNDBP1-208ENST00000566515 ITPK1Q13572 414 aa27.56■■■□□ 2
CCNDBP1-208ENST00000566515 ZNF827Q17R98 1081 aa27.56■■■□□ 2
CCNDBP1-208ENST00000566515 UBR2Q8IWV8 1755 aa27.55■■■□□ 2
CCNDBP1-208ENST00000566515 TAF7Q15545 349 aaPredicted RBP27.55■■■□□ 2
CCNDBP1-208ENST00000566515 SLC15A2Q16348 729 aa27.55■■■□□ 2
CCNDBP1-208ENST00000566515 KCPQ6ZWJ8 1503 aa27.55■■■□□ 2
CCNDBP1-208ENST00000566515 ZNF790Q6PG37 636 aa27.54■■■□□ 2
CCNDBP1-208ENST00000566515 TTC5Q8N0Z6 440 aa27.54■■■□□ 2
CCNDBP1-208ENST00000566515 ZNF831Q5JPB2 1677 aa27.54■■■□□ 2
CCNDBP1-208ENST00000566515 KCNQ3O43525 872 aa27.53■■■□□ 2
CCNDBP1-208ENST00000566515 MIS18AQ9NYP9 233 aa27.53■■■□□ 2
CCNDBP1-208ENST00000566515 LINC00116Q8NCU8 138 aa27.52■■■□□ 2
CCNDBP1-208ENST00000566515 AKT1S1Q96B36 256 aa27.52■■■□□ 2
CCNDBP1-208ENST00000566515 C4BP0C0L5 1744 aa27.51■■□□□ 1.99
CCNDBP1-208ENST00000566515 TJP1Q07157 1748 aa27.5■■□□□ 1.99
CCNDBP1-208ENST00000566515 TUBGCP6Q96RT7 1819 aa27.5■■□□□ 1.99
CCNDBP1-208ENST00000566515 ZNF496Q96IT1 587 aaPredicted RBP27.49■■□□□ 1.99
CCNDBP1-208ENST00000566515 COL5A3P25940 1745 aaPredicted RBP27.49■■□□□ 1.99
CCNDBP1-208ENST00000566515 TFCP2L1Q9NZI6 479 aa27.48■■□□□ 1.99
CCNDBP1-208ENST00000566515 KDM3BQ7LBC6 1761 aa27.47■■□□□ 1.99
CCNDBP1-208ENST00000566515 HMGB2P26583 209 aaKnown RBP27.46■■□□□ 1.99
CCNDBP1-208ENST00000566515 DNAJC10Q8IXB1 793 aa27.46■■□□□ 1.99
CCNDBP1-208ENST00000566515 PDGFDQ9GZP0 370 aaPredicted RBP27.46■■□□□ 1.99
CCNDBP1-208ENST00000566515 CICQ96RK0 1608 aaPredicted RBP27.46■■□□□ 1.99
CCNDBP1-208ENST00000566515 FMNL2Q96PY5 1086 aa27.45■■□□□ 1.99
CCNDBP1-208ENST00000566515 AK7Q96M32 723 aa27.45■■□□□ 1.98
CCNDBP1-208ENST00000566515 HEG1Q9ULI3 1381 aa27.44■■□□□ 1.98
CCNDBP1-208ENST00000566515 MYH14Q7Z406 1995 aaKnown RBP27.44■■□□□ 1.98
CCNDBP1-208ENST00000566515 VSIG10Q8N0Z9 540 aa27.44■■□□□ 1.98
CCNDBP1-208ENST00000566515 SALL2Q9Y467 1007 aaPredicted RBP27.44■■□□□ 1.98
CCNDBP1-208ENST00000566515 QSER1Q2KHR3 1735 aa27.43■■□□□ 1.98
CCNDBP1-208ENST00000566515 LAS1LQ9Y4W2 734 aaKnown RBP27.43■■□□□ 1.98
CCNDBP1-208ENST00000566515 UBR3Q6ZT12 1888 aa27.43■■□□□ 1.98
CCNDBP1-208ENST00000566515 SMIM5Q71RC9 77 aa27.42■■□□□ 1.98
CCNDBP1-208ENST00000566515 AMIGO3Q86WK7 504 aa27.42■■□□□ 1.98
CCNDBP1-208ENST00000566515 TSPYL4Q9UJ04 414 aa27.42■■□□□ 1.98
CCNDBP1-208ENST00000566515 PNPLA7Q6ZV29 1317 aa27.41■■□□□ 1.98
CCNDBP1-208ENST00000566515 CASZ1Q86V15 1759 aa27.41■■□□□ 1.98
CCNDBP1-208ENST00000566515 GNPATO15228 680 aa27.41■■□□□ 1.98
CCNDBP1-208ENST00000566515 CRKLP46109 303 aaKnown RBP27.41■■□□□ 1.98
CCNDBP1-208ENST00000566515 CYP19A1P11511 503 aaPredicted RBP27.4■■□□□ 1.98
CCNDBP1-208ENST00000566515 CNTNAP4Q9C0A0 1308 aa27.39■■□□□ 1.98
CCNDBP1-208ENST00000566515 RC3H1Q5TC82 1133 aaKnown RBP27.39■■□□□ 1.98
CCNDBP1-208ENST00000566515 PRAMEF22A3QJZ6 481 aa27.38■■□□□ 1.97
CCNDBP1-208ENST00000566515 PHF14O94880 888 aa27.38■■□□□ 1.97
CCNDBP1-208ENST00000566515 CCDC27Q2M243 656 aa27.38■■□□□ 1.97
CCNDBP1-208ENST00000566515 WWC1Q8IX03 1113 aa27.38■■□□□ 1.97
CCNDBP1-208ENST00000566515 CHL1O00533 1208 aa27.38■■□□□ 1.97
CCNDBP1-208ENST00000566515 EIF4A1P60842 406 aaKnown RBP27.38■■□□□ 1.97
CCNDBP1-208ENST00000566515 BABAM1Q9NWV8 329 aa27.38■■□□□ 1.97
CCNDBP1-208ENST00000566515 INTS5Q6P9B9 1019 aaKnown RBP27.37■■□□□ 1.97
CCNDBP1-208ENST00000566515 COL23A1Q86Y22 540 aaPredicted RBP27.37■■□□□ 1.97
CCNDBP1-208ENST00000566515 MSH5O43196 834 aa27.36■■□□□ 1.97
CCNDBP1-208ENST00000566515 SNRPA1P09661 255 aaKnown RBP27.36■■□□□ 1.97
CCNDBP1-208ENST00000566515 CALD1Q05682 793 aaKnown RBP27.36■■□□□ 1.97
CCNDBP1-208ENST00000566515 CFAP44Q96MT7 982 aa27.36■■□□□ 1.97
CCNDBP1-208ENST00000566515 TEX13AQ9BXU3 409 aaPredicted RBP27.36■■□□□ 1.97
CCNDBP1-208ENST00000566515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.35■■□□□ 1.97
CCNDBP1-208ENST00000566515 STARD3NLO95772 234 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms