RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
SMPD3-207ENST00000566466 PNNQ9H307 717 aaKnown RBP12.18□□□□□ -0.46
SMPD3-207ENST00000566466 KDM3BQ7LBC6 1761 aa12.18□□□□□ -0.46
SMPD3-207ENST00000566466 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
SMPD3-207ENST00000566466 BTAF1O14981 1849 aa12.17□□□□□ -0.46
SMPD3-207ENST00000566466 ZNF853P0CG23 659 aa12.17□□□□□ -0.46
SMPD3-207ENST00000566466 C1orf141Q5JVX7 400 aa12.17□□□□□ -0.46
SMPD3-207ENST00000566466 PIGBQ92521 554 aa12.17□□□□□ -0.46
SMPD3-207ENST00000566466 SLC52A2Q9HAB3 445 aa12.17□□□□□ -0.46
SMPD3-207ENST00000566466 ERVV-2B6SEH9 535 aa12.16□□□□□ -0.46
SMPD3-207ENST00000566466 PRIM1P49642 420 aaKnown RBP12.16□□□□□ -0.46
SMPD3-207ENST00000566466 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.46
SMPD3-207ENST00000566466 KCNQ3O43525 872 aa12.15□□□□□ -0.46
SMPD3-207ENST00000566466 HSP90AB1P08238 724 aaKnown RBP12.15□□□□□ -0.46
SMPD3-207ENST00000566466 FAM196AQ6ZSG2 479 aa12.15□□□□□ -0.46
SMPD3-207ENST00000566466 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
SMPD3-207ENST00000566466 SALL2Q9Y467 1007 aaPredicted RBP12.15□□□□□ -0.46
SMPD3-207ENST00000566466 HEG1Q9ULI3 1381 aa12.15□□□□□ -0.46
SMPD3-207ENST00000566466 NFATC2IPQ8NCF5 419 aa12.14□□□□□ -0.47
SMPD3-207ENST00000566466 ZBED9Q6R2W3 1325 aa12.13□□□□□ -0.47
SMPD3-207ENST00000566466 CHL1O00533 1208 aa12.13□□□□□ -0.47
SMPD3-207ENST00000566466 TRIM37O94972 964 aa12.13□□□□□ -0.47
SMPD3-207ENST00000566466 HNRNPUQ00839 825 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMPD3-207ENST00000566466 BCL11BQ9C0K0 894 aaPredicted RBP12.13□□□□□ -0.47
SMPD3-207ENST00000566466 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
SMPD3-207ENST00000566466 ASAP1Q9ULH1 1129 aa12.13□□□□□ -0.47
SMPD3-207ENST00000566466 LY75O60449 1722 aa12.13□□□□□ -0.47
SMPD3-207ENST00000566466 RGPD3A6NKT7 1758 aaPredicted RBP12.13□□□□□ -0.47
SMPD3-207ENST00000566466 RGPD4Q7Z3J3 1758 aa12.13□□□□□ -0.47
SMPD3-207ENST00000566466 TJP1Q07157 1748 aa12.12□□□□□ -0.47
SMPD3-207ENST00000566466 LMOD3Q0VAK6 560 aa12.12□□□□□ -0.47
SMPD3-207ENST00000566466 SLC39A6Q13433 755 aa12.12□□□□□ -0.47
SMPD3-207ENST00000566466 TRMT2AQ8IZ69 625 aaKnown RBP12.12□□□□□ -0.47
SMPD3-207ENST00000566466 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
SMPD3-207ENST00000566466 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
SMPD3-207ENST00000566466 IL16Q14005 1332 aa12.11□□□□□ -0.47
SMPD3-207ENST00000566466 C5P01031 1676 aa12.11□□□□□ -0.47
SMPD3-207ENST00000566466 NEFMP07197 916 aa12.11□□□□□ -0.47
SMPD3-207ENST00000566466 CABP4P57796 275 aa12.11□□□□□ -0.47
SMPD3-207ENST00000566466 WDR63Q8IWG1 891 aa12.11□□□□□ -0.47
SMPD3-207ENST00000566466 PROM2Q8N271 834 aa12.11□□□□□ -0.47
SMPD3-207ENST00000566466 NGEFQ8N5V2 710 aa12.11□□□□□ -0.47
SMPD3-207ENST00000566466 RTF1Q92541 710 aaKnown RBP12.11□□□□□ -0.47
SMPD3-207ENST00000566466 MBIPQ9NS73 344 aa12.11□□□□□ -0.47
SMPD3-207ENST00000566466 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
SMPD3-207ENST00000566466 RREB1Q92766 1687 aa12.1□□□□□ -0.47
SMPD3-207ENST00000566466 PALLDQ8WX93 1383 aa12.1□□□□□ -0.47
SMPD3-207ENST00000566466 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
SMPD3-207ENST00000566466 KRT24Q2M2I5 525 aa12.1□□□□□ -0.47
SMPD3-207ENST00000566466 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMPD3-207ENST00000566466 CFAP44Q96MT7 982 aa12.1□□□□□ -0.47
SMPD3-207ENST00000566466 IFT57Q9NWB7 429 aa12.1□□□□□ -0.47
SMPD3-207ENST00000566466 TMOD3Q9NYL9 352 aa12.1□□□□□ -0.47
SMPD3-207ENST00000566466 FANCIQ9NVI1 1328 aa12.1□□□□□ -0.47
SMPD3-207ENST00000566466 PRAMEF22A3QJZ6 481 aa12.09□□□□□ -0.47
SMPD3-207ENST00000566466 SLFN5Q08AF3 891 aa12.09□□□□□ -0.47
SMPD3-207ENST00000566466 TEFQ10587 303 aa12.09□□□□□ -0.47
SMPD3-207ENST00000566466 ZNF790Q6PG37 636 aa12.09□□□□□ -0.47
SMPD3-207ENST00000566466 TSR2Q969E8 191 aaKnown RBP12.09□□□□□ -0.47
SMPD3-207ENST00000566466 SYTL4Q96C24 671 aaPredicted RBP12.09□□□□□ -0.47
SMPD3-207ENST00000566466 BTBD11A6QL63 1104 aa12.08□□□□□ -0.48
SMPD3-207ENST00000566466 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
SMPD3-207ENST00000566466 EIF4A1P60842 406 aaKnown RBP12.08□□□□□ -0.48
SMPD3-207ENST00000566466 ITPK1Q13572 414 aa12.08□□□□□ -0.48
SMPD3-207ENST00000566466 DUSP27Q5VZP5 1158 aa12.08□□□□□ -0.48
SMPD3-207ENST00000566466 ZNF496Q96IT1 587 aaPredicted RBP12.08□□□□□ -0.48
SMPD3-207ENST00000566466 CAMKK2Q96RR4 588 aa12.08□□□□□ -0.48
SMPD3-207ENST00000566466 LRRC4BQ9NT99 713 aa12.08□□□□□ -0.48
SMPD3-207ENST00000566466 BABAM1Q9NWV8 329 aa12.08□□□□□ -0.48
SMPD3-207ENST00000566466 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.48
SMPD3-207ENST00000566466 NUP188Q5SRE5 1749 aa12.06□□□□□ -0.48
SMPD3-207ENST00000566466 PLSCR1O15162 318 aa12.06□□□□□ -0.48
SMPD3-207ENST00000566466 KCNQ4P56696 695 aa12.06□□□□□ -0.48
SMPD3-207ENST00000566466 DEFB132Q7Z7B7 95 aa12.06□□□□□ -0.48
SMPD3-207ENST00000566466 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
SMPD3-207ENST00000566466 LAMB4A4D0S4 1761 aa12.05□□□□□ -0.48
SMPD3-207ENST00000566466 GNAI1P63096 354 aa12.05□□□□□ -0.48
SMPD3-207ENST00000566466 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
SMPD3-207ENST00000566466 AMIGO3Q86WK7 504 aa12.05□□□□□ -0.48
SMPD3-207ENST00000566466 TSPYL6Q8N831 410 aa12.05□□□□□ -0.48
SMPD3-207ENST00000566466 C8orf58Q8NAV2 365 aa12.05□□□□□ -0.48
SMPD3-207ENST00000566466 TAF1LQ8IZX4 1826 aa12.04□□□□□ -0.48
SMPD3-207ENST00000566466 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
SMPD3-207ENST00000566466 PTCD1O75127 700 aaKnown RBP12.04□□□□□ -0.48
SMPD3-207ENST00000566466 APBA3O96018 575 aa12.04□□□□□ -0.48
SMPD3-207ENST00000566466 SIK1P57059 783 aa12.04□□□□□ -0.48
SMPD3-207ENST00000566466 LINC00116Q8NCU8 138 aa12.04□□□□□ -0.48
SMPD3-207ENST00000566466 YTHDC1Q96MU7 727 aaKnown RBP12.04□□□□□ -0.48
SMPD3-207ENST00000566466 E9PSI1 815 aa12.03□□□□□ -0.48
SMPD3-207ENST00000566466 GIGYF1O75420 1035 aaPredicted RBP12.03□□□□□ -0.48
SMPD3-207ENST00000566466 CALD1Q05682 793 aaKnown RBP12.03□□□□□ -0.48
SMPD3-207ENST00000566466 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
SMPD3-207ENST00000566466 EZH2Q15910 746 aaKnown RBP12.03□□□□□ -0.48
SMPD3-207ENST00000566466 LRP10Q7Z4F1 713 aa12.03□□□□□ -0.48
SMPD3-207ENST00000566466 MYH14Q7Z406 1995 aaKnown RBP12.02□□□□□ -0.49
SMPD3-207ENST00000566466 EXOSC9Q06265 439 aaKnown RBP12.02□□□□□ -0.49
SMPD3-207ENST00000566466 TXNRD1Q16881 649 aa12.02□□□□□ -0.49
SMPD3-207ENST00000566466 DNAJC10Q8IXB1 793 aa12.02□□□□□ -0.49
SMPD3-207ENST00000566466 VSIG10Q8N0Z9 540 aa12.02□□□□□ -0.49
SMPD3-207ENST00000566466 SMARCC1Q92922 1105 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms