RNA–Protein interactions for RNA: ENST00000566434.5

GDPD3-204, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 3

Gene GDPD3, Length 399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-204ENST00000566434 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
GDPD3-204ENST00000566434 ADAMTS8Q9UP79 889 aa17.13■□□□□ 0.33
GDPD3-204ENST00000566434 ADAMTS7Q9UKP4 1686 aa17.13■□□□□ 0.33
GDPD3-204ENST00000566434 KCNQ4P56696 695 aa17.12■□□□□ 0.33
GDPD3-204ENST00000566434 ATG3Q9NT62 314 aa17.12■□□□□ 0.33
GDPD3-204ENST00000566434 NFE2L2Q16236 605 aa17.11■□□□□ 0.33
GDPD3-204ENST00000566434 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
GDPD3-204ENST00000566434 LRRC4BQ9NT99 713 aa17.11■□□□□ 0.33
GDPD3-204ENST00000566434 DLG5Q8TDM6 1919 aa17.11■□□□□ 0.33
GDPD3-204ENST00000566434 MCM10Q7L590 875 aa17.1■□□□□ 0.33
GDPD3-204ENST00000566434 IL17REQ8NFR9 667 aa17.1■□□□□ 0.33
GDPD3-204ENST00000566434 RUNDC1Q96C34 613 aa17.1■□□□□ 0.33
GDPD3-204ENST00000566434 ANO8Q9HCE9 1232 aaPredicted RBP17.1■□□□□ 0.33
GDPD3-204ENST00000566434 PAPPAQ13219 1627 aa17.1■□□□□ 0.33
GDPD3-204ENST00000566434 C5P01031 1676 aa17.1■□□□□ 0.33
GDPD3-204ENST00000566434 LOC102724428A0A0B4J2F2 783 aa17.09■□□□□ 0.33
GDPD3-204ENST00000566434 HTATSF1O43719 755 aaKnown RBP17.09■□□□□ 0.33
GDPD3-204ENST00000566434 SIK1P57059 783 aa17.09■□□□□ 0.33
GDPD3-204ENST00000566434 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
GDPD3-204ENST00000566434 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.32
GDPD3-204ENST00000566434 ATP6V1AP38606 617 aa17.08■□□□□ 0.32
GDPD3-204ENST00000566434 DCTN1Q14203 1278 aa17.08■□□□□ 0.32
GDPD3-204ENST00000566434 CEMIPQ8WUJ3 1361 aa17.07■□□□□ 0.32
GDPD3-204ENST00000566434 RIPK4P57078 832 aa17.07■□□□□ 0.32
GDPD3-204ENST00000566434 SLC39A6Q13433 755 aa17.07■□□□□ 0.32
GDPD3-204ENST00000566434 NEUROD2Q15784 382 aa17.07■□□□□ 0.32
GDPD3-204ENST00000566434 SLC15A2Q16348 729 aa17.07■□□□□ 0.32
GDPD3-204ENST00000566434 TTC5Q8N0Z6 440 aa17.07■□□□□ 0.32
GDPD3-204ENST00000566434 RRP7AQ9Y3A4 280 aaKnown RBP17.07■□□□□ 0.32
GDPD3-204ENST00000566434 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
GDPD3-204ENST00000566434 TAF1LQ8IZX4 1826 aa17.06■□□□□ 0.32
GDPD3-204ENST00000566434 TMPOP42166 694 aaKnown RBP17.06■□□□□ 0.32
GDPD3-204ENST00000566434 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
GDPD3-204ENST00000566434 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
GDPD3-204ENST00000566434 ZNF827Q17R98 1081 aa17.05■□□□□ 0.32
GDPD3-204ENST00000566434 BTBD11A6QL63 1104 aa17.04■□□□□ 0.32
GDPD3-204ENST00000566434 PNISRQ8TF01 805 aaKnown RBP17.04■□□□□ 0.32
GDPD3-204ENST00000566434 AK7Q96M32 723 aa17.04■□□□□ 0.32
GDPD3-204ENST00000566434 TFCP2L1Q9NZI6 479 aa17.04■□□□□ 0.32
GDPD3-204ENST00000566434 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
GDPD3-204ENST00000566434 ITPK1Q13572 414 aa17.03■□□□□ 0.32
GDPD3-204ENST00000566434 AKT1S1Q96B36 256 aa17.03■□□□□ 0.32
GDPD3-204ENST00000566434 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
GDPD3-204ENST00000566434 ZNF831Q5JPB2 1677 aa17.02■□□□□ 0.32
GDPD3-204ENST00000566434 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
GDPD3-204ENST00000566434 LINC00116Q8NCU8 138 aa17.02■□□□□ 0.32
GDPD3-204ENST00000566434 KCPQ6ZWJ8 1503 aa17.01■□□□□ 0.31
GDPD3-204ENST00000566434 TUBGCP6Q96RT7 1819 aa17.01■□□□□ 0.31
GDPD3-204ENST00000566434 APAF1O14727 1248 aa17.01■□□□□ 0.31
GDPD3-204ENST00000566434 MSH5O43196 834 aa17.01■□□□□ 0.31
GDPD3-204ENST00000566434 TAF7Q15545 349 aaPredicted RBP17.01■□□□□ 0.31
GDPD3-204ENST00000566434 ZNF790Q6PG37 636 aa17.01■□□□□ 0.31
GDPD3-204ENST00000566434 UBR2Q8IWV8 1755 aa17.01■□□□□ 0.31
GDPD3-204ENST00000566434 TJP1Q07157 1748 aa17.01■□□□□ 0.31
GDPD3-204ENST00000566434 COL5A3P25940 1745 aaPredicted RBP17■□□□□ 0.31
GDPD3-204ENST00000566434 SLC4A9Q96Q91 983 aa17■□□□□ 0.31
GDPD3-204ENST00000566434 QSER1Q2KHR3 1735 aa16.99■□□□□ 0.31
GDPD3-204ENST00000566434 GNPATO15228 680 aa16.99■□□□□ 0.31
GDPD3-204ENST00000566434 FMNL2Q96PY5 1086 aa16.99■□□□□ 0.31
GDPD3-204ENST00000566434 CASZ1Q86V15 1759 aa16.99■□□□□ 0.31
GDPD3-204ENST00000566434 PHF14O94880 888 aa16.98■□□□□ 0.31
GDPD3-204ENST00000566434 DNAJC10Q8IXB1 793 aa16.98■□□□□ 0.31
GDPD3-204ENST00000566434 ZNF496Q96IT1 587 aaPredicted RBP16.98■□□□□ 0.31
GDPD3-204ENST00000566434 MIS18AQ9NYP9 233 aa16.98■□□□□ 0.31
GDPD3-204ENST00000566434 CICQ96RK0 1608 aaPredicted RBP16.98■□□□□ 0.31
GDPD3-204ENST00000566434 PNPLA7Q6ZV29 1317 aa16.97■□□□□ 0.31
GDPD3-204ENST00000566434 SENP3-EIF4A1A0A087X0R7 540 aa16.97■□□□□ 0.31
GDPD3-204ENST00000566434 KCNQ3O43525 872 aa16.97■□□□□ 0.31
GDPD3-204ENST00000566434 CNTNAP4Q9C0A0 1308 aa16.96■□□□□ 0.31
GDPD3-204ENST00000566434 ZBTB7AO95365 584 aa16.96■□□□□ 0.31
GDPD3-204ENST00000566434 VSIG10Q8N0Z9 540 aa16.96■□□□□ 0.31
GDPD3-204ENST00000566434 PDGFDQ9GZP0 370 aaPredicted RBP16.96■□□□□ 0.31
GDPD3-204ENST00000566434 TSPYL4Q9UJ04 414 aa16.96■□□□□ 0.31
GDPD3-204ENST00000566434 TRIM35Q9UPQ4 493 aa16.96■□□□□ 0.31
GDPD3-204ENST00000566434 LAS1LQ9Y4W2 734 aaKnown RBP16.96■□□□□ 0.31
GDPD3-204ENST00000566434 HEG1Q9ULI3 1381 aa16.96■□□□□ 0.31
GDPD3-204ENST00000566434 KDM3BQ7LBC6 1761 aa16.96■□□□□ 0.31
GDPD3-204ENST00000566434 UBR3Q6ZT12 1888 aa16.96■□□□□ 0.31
GDPD3-204ENST00000566434 CCER2I3L3R5 266 aa16.95■□□□□ 0.3
GDPD3-204ENST00000566434 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
GDPD3-204ENST00000566434 FLAD1Q8NFF5 587 aa16.95■□□□□ 0.3
GDPD3-204ENST00000566434 RTCBQ9Y3I0 505 aaKnown RBP16.95■□□□□ 0.3
GDPD3-204ENST00000566434 STARD3NLO95772 234 aa16.94■□□□□ 0.3
GDPD3-204ENST00000566434 RC3H1Q5TC82 1133 aaKnown RBP16.94■□□□□ 0.3
GDPD3-204ENST00000566434 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.93■□□□□ 0.3
GDPD3-204ENST00000566434 SSFA2P28290 1259 aa16.93■□□□□ 0.3
GDPD3-204ENST00000566434 CALD1Q05682 793 aaKnown RBP16.93■□□□□ 0.3
GDPD3-204ENST00000566434 SMIM5Q71RC9 77 aa16.93■□□□□ 0.3
GDPD3-204ENST00000566434 COL23A1Q86Y22 540 aaPredicted RBP16.93■□□□□ 0.3
GDPD3-204ENST00000566434 TEX13AQ9BXU3 409 aaPredicted RBP16.93■□□□□ 0.3
GDPD3-204ENST00000566434 SPON1Q9HCB6 807 aa16.93■□□□□ 0.3
GDPD3-204ENST00000566434 CCDC87Q9NVE4 849 aa16.93■□□□□ 0.3
GDPD3-204ENST00000566434 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
GDPD3-204ENST00000566434 LRP5O75197 1615 aa16.92■□□□□ 0.3
GDPD3-204ENST00000566434 MYH14Q7Z406 1995 aaKnown RBP16.92■□□□□ 0.3
GDPD3-204ENST00000566434 SNRPA1P09661 255 aaKnown RBP16.92■□□□□ 0.3
GDPD3-204ENST00000566434 CYP19A1P11511 503 aaPredicted RBP16.92■□□□□ 0.3
GDPD3-204ENST00000566434 MIER1Q8N108 512 aa16.92■□□□□ 0.3
GDPD3-204ENST00000566434 MTFR1LQ9H019 292 aa16.92■□□□□ 0.3
GDPD3-204ENST00000566434 SALL2Q9Y467 1007 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms