RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 NFATC2IPQ8NCF5 419 aa14.42□□□□□ -0.1
LINC00562-201ENST00000566385 C1orf115Q9H7X2 142 aa14.42□□□□□ -0.1
LINC00562-201ENST00000566385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.1
LINC00562-201ENST00000566385 ADAMTS7Q9UKP4 1686 aa14.42□□□□□ -0.1
LINC00562-201ENST00000566385 SIPA1L3O60292 1781 aaPredicted RBP14.42□□□□□ -0.1
LINC00562-201ENST00000566385 F6X3S4 739 aa14.41□□□□□ -0.1
LINC00562-201ENST00000566385 EIF2S2P20042 333 aaKnown RBP14.41□□□□□ -0.1
LINC00562-201ENST00000566385 MYT1Q01538 1121 aa14.41□□□□□ -0.1
LINC00562-201ENST00000566385 IFNL2Q8IZJ0 200 aa14.41□□□□□ -0.1
LINC00562-201ENST00000566385 API5Q9BZZ5 524 aaKnown RBP14.41□□□□□ -0.1
LINC00562-201ENST00000566385 SCN11AQ9UI33 1791 aa14.41□□□□□ -0.1
LINC00562-201ENST00000566385 SLC39A6Q13433 755 aa14.41□□□□□ -0.1
LINC00562-201ENST00000566385 AAMPQ13685 434 aa14.41□□□□□ -0.1
LINC00562-201ENST00000566385 PKD1L3Q7Z443 1732 aa14.41□□□□□ -0.1
LINC00562-201ENST00000566385 OVOS2A0A0G2JMS6 1433 aa14.4□□□□□ -0.1
LINC00562-201ENST00000566385 HDGFL1Q5TGJ6 251 aa14.4□□□□□ -0.1
LINC00562-201ENST00000566385 CCDC30Q5VVM6 783 aa14.4□□□□□ -0.1
LINC00562-201ENST00000566385 CARD10Q9BWT7 1032 aa14.4□□□□□ -0.1
LINC00562-201ENST00000566385 RGS3P49796 1198 aa14.39□□□□□ -0.11
LINC00562-201ENST00000566385 STK31Q9BXU1 1019 aa14.39□□□□□ -0.11
LINC00562-201ENST00000566385 PHAXQ9H814 394 aaKnown RBP14.39□□□□□ -0.11
LINC00562-201ENST00000566385 SLC52A2Q9HAB3 445 aa14.39□□□□□ -0.11
LINC00562-201ENST00000566385 PHLPP1O60346 1717 aa14.39□□□□□ -0.11
LINC00562-201ENST00000566385 COL16A1Q07092 1604 aaPredicted RBP14.39□□□□□ -0.11
LINC00562-201ENST00000566385 PTPRCP08575 1304 aa14.39□□□□□ -0.11
LINC00562-201ENST00000566385 ADAMTS2O95450 1211 aa14.38□□□□□ -0.11
LINC00562-201ENST00000566385 ANXA1P04083 346 aa14.38□□□□□ -0.11
LINC00562-201ENST00000566385 FLIIQ13045 1269 aa14.38□□□□□ -0.11
LINC00562-201ENST00000566385 IL2RBP14784 551 aa14.38□□□□□ -0.11
LINC00562-201ENST00000566385 INTS3Q68E01 1043 aaKnown RBP14.38□□□□□ -0.11
LINC00562-201ENST00000566385 ZCRB1Q8TBF4 217 aaKnown RBP14.38□□□□□ -0.11
LINC00562-201ENST00000566385 COL22A1Q8NFW1 1626 aaPredicted RBP14.38□□□□□ -0.11
LINC00562-201ENST00000566385 TOM1O60784 492 aa14.37□□□□□ -0.11
LINC00562-201ENST00000566385 SLC4A10Q6U841 1118 aa14.37□□□□□ -0.11
LINC00562-201ENST00000566385 GIGYF1O75420 1035 aaPredicted RBP14.37□□□□□ -0.11
LINC00562-201ENST00000566385 DDX54Q8TDD1 881 aaKnown RBP14.37□□□□□ -0.11
LINC00562-201ENST00000566385 DCAF5Q96JK2 942 aa14.37□□□□□ -0.11
LINC00562-201ENST00000566385 RWDD1Q9H446 243 aaPredicted RBP14.37□□□□□ -0.11
LINC00562-201ENST00000566385 CHPF2Q9P2E5 772 aa14.37□□□□□ -0.11
LINC00562-201ENST00000566385 PARP4Q9UKK3 1724 aaKnown RBP14.37□□□□□ -0.11
LINC00562-201ENST00000566385 FKBP5Q13451 457 aaPredicted RBP14.36□□□□□ -0.11
LINC00562-201ENST00000566385 ZNF790Q6PG37 636 aa14.36□□□□□ -0.11
LINC00562-201ENST00000566385 HEG1Q9ULI3 1381 aa14.36□□□□□ -0.11
LINC00562-201ENST00000566385 UBAP1LF5GYI3 381 aa14.36□□□□□ -0.11
LINC00562-201ENST00000566385 SIRT2Q8IXJ6 389 aa14.36□□□□□ -0.11
LINC00562-201ENST00000566385 SHANK3Q9BYB0 1731 aa14.35□□□□□ -0.11
LINC00562-201ENST00000566385 NUTM2BA6NNL0 878 aaPredicted RBP14.35□□□□□ -0.11
LINC00562-201ENST00000566385 NUTM2EB1AL46 878 aaPredicted RBP14.35□□□□□ -0.11
LINC00562-201ENST00000566385 NUTM2AQ8IVF1 878 aaPredicted RBP14.35□□□□□ -0.11
LINC00562-201ENST00000566385 HDAC1Q13547 482 aaPredicted RBP14.35□□□□□ -0.11
LINC00562-201ENST00000566385 MEIS3Q99687 375 aa14.35□□□□□ -0.11
LINC00562-201ENST00000566385 PDZRN3Q9UPQ7 1066 aa14.35□□□□□ -0.11
LINC00562-201ENST00000566385 CACNA1FO60840 1977 aa14.35□□□□□ -0.11
LINC00562-201ENST00000566385 COL14A1Q05707 1796 aaKnown RBP14.34□□□□□ -0.11
LINC00562-201ENST00000566385 PROSER3Q2NL68 480 aa14.34□□□□□ -0.11
LINC00562-201ENST00000566385 SOS1Q07889 1333 aaPredicted RBP14.34□□□□□ -0.11
LINC00562-201ENST00000566385 ZNF496Q96IT1 587 aaPredicted RBP14.34□□□□□ -0.11
LINC00562-201ENST00000566385 PCDH11XQ9BZA7 1347 aa14.34□□□□□ -0.11
LINC00562-201ENST00000566385 PCDH11YQ9BZA8 1340 aa14.34□□□□□ -0.11
LINC00562-201ENST00000566385 HOXB7P09629 217 aa14.33□□□□□ -0.12
LINC00562-201ENST00000566385 CABP4P57796 275 aa14.33□□□□□ -0.12
LINC00562-201ENST00000566385 PLEKHG2Q9H7P9 1386 aa14.33□□□□□ -0.12
LINC00562-201ENST00000566385 PDE4AP27815 886 aa14.32□□□□□ -0.12
LINC00562-201ENST00000566385 C5P01031 1676 aa14.32□□□□□ -0.12
LINC00562-201ENST00000566385 MRC1P22897 1456 aa14.32□□□□□ -0.12
LINC00562-201ENST00000566385 HSP90AB1P08238 724 aaKnown RBP14.31□□□□□ -0.12
LINC00562-201ENST00000566385 SMC5Q8IY18 1101 aa14.31□□□□□ -0.12
LINC00562-201ENST00000566385 PIP4K2AP48426 406 aaPredicted RBP14.3□□□□□ -0.12
LINC00562-201ENST00000566385 BACH2Q9BYV9 841 aa14.3□□□□□ -0.12
LINC00562-201ENST00000566385 USP16Q9Y5T5 823 aa14.3□□□□□ -0.12
LINC00562-201ENST00000566385 PLCH1Q4KWH8 1693 aa14.3□□□□□ -0.12
LINC00562-201ENST00000566385 PI4KAP2A4QPH2 592 aa14.3□□□□□ -0.12
LINC00562-201ENST00000566385 NKX1-1Q15270 411 aaPredicted RBP14.3□□□□□ -0.12
LINC00562-201ENST00000566385 PI4KAP1Q8N8J0 262 aa14.3□□□□□ -0.12
LINC00562-201ENST00000566385 DBF4Q9UBU7 674 aaPredicted RBP14.3□□□□□ -0.12
LINC00562-201ENST00000566385 PDIA6Q15084 440 aa14.29□□□□□ -0.12
LINC00562-201ENST00000566385 ATP10DQ9P241 1426 aa14.29□□□□□ -0.12
LINC00562-201ENST00000566385 CCT4P50991 539 aaKnown RBP14.29□□□□□ -0.12
LINC00562-201ENST00000566385 AEBP2Q6ZN18 517 aaPredicted RBP14.29□□□□□ -0.12
LINC00562-201ENST00000566385 TTC5Q8N0Z6 440 aa14.29□□□□□ -0.12
LINC00562-201ENST00000566385 CHMP4BQ9H444 224 aaKnown RBP14.29□□□□□ -0.12
LINC00562-201ENST00000566385 TOGARAM1Q9Y4F4 1720 aa14.28□□□□□ -0.12
LINC00562-201ENST00000566385 DISP2A7MBM2 1401 aa14.27□□□□□ -0.12
LINC00562-201ENST00000566385 CEP85Q6P2H3 762 aa14.27□□□□□ -0.13
LINC00562-201ENST00000566385 ADCY9O60503 1353 aa14.27□□□□□ -0.13
LINC00562-201ENST00000566385 KAT6BQ8WYB5 2073 aa14.27□□□□□ -0.13
LINC00562-201ENST00000566385 ERVV-2B6SEH9 535 aa14.26□□□□□ -0.13
LINC00562-201ENST00000566385 MYL6BP14649 208 aa14.26□□□□□ -0.13
LINC00562-201ENST00000566385 AIMP1Q12904 312 aaKnown RBP14.26□□□□□ -0.13
LINC00562-201ENST00000566385 C8orf34Q49A92 452 aa14.26□□□□□ -0.13
LINC00562-201ENST00000566385 GLI3P10071 1580 aa14.26□□□□□ -0.13
LINC00562-201ENST00000566385 FMNL2Q96PY5 1086 aa14.26□□□□□ -0.13
LINC00562-201ENST00000566385 LNPKQ9C0E8 428 aa14.26□□□□□ -0.13
LINC00562-201ENST00000566385 USP44Q9H0E7 712 aa14.26□□□□□ -0.13
LINC00562-201ENST00000566385 NRAPQ86VF7 1730 aa14.26□□□□□ -0.13
LINC00562-201ENST00000566385 PTCD1O75127 700 aaKnown RBP14.25□□□□□ -0.13
LINC00562-201ENST00000566385 DDX21Q9NR30 783 aaKnown RBP eCLIP14.25□□□□□ -0.13
LINC00562-201ENST00000566385 SNRPA1P09661 255 aaKnown RBP14.25□□□□□ -0.13
LINC00562-201ENST00000566385 ANKRD44Q8N8A2 993 aa14.25□□□□□ -0.13
LINC00562-201ENST00000566385 DNAAF4Q8WXU2 420 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms