RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 PHKG2P15735 406 aa16.36■□□□□ 0.21
NR4A1-221ENST00000565848 NKX1-1Q15270 411 aaPredicted RBP16.36■□□□□ 0.21
NR4A1-221ENST00000565848 AKAP4Q5JQC9 854 aa16.36■□□□□ 0.21
NR4A1-221ENST00000565848 PROM2Q8N271 834 aa16.36■□□□□ 0.21
NR4A1-221ENST00000565848 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
NR4A1-221ENST00000565848 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
NR4A1-221ENST00000565848 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
NR4A1-221ENST00000565848 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
NR4A1-221ENST00000565848 NEFMP07197 916 aa16.35■□□□□ 0.21
NR4A1-221ENST00000565848 BCL9O00512 1426 aa16.35■□□□□ 0.21
NR4A1-221ENST00000565848 RIPK4P57078 832 aa16.34■□□□□ 0.21
NR4A1-221ENST00000565848 HNRNPUQ00839 825 aaKnown RBP eCLIP16.34■□□□□ 0.21
NR4A1-221ENST00000565848 ZNF530Q6P9A1 599 aaPredicted RBP16.34■□□□□ 0.21
NR4A1-221ENST00000565848 WWC1Q8IX03 1113 aa16.34■□□□□ 0.21
NR4A1-221ENST00000565848 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
NR4A1-221ENST00000565848 NUP188Q5SRE5 1749 aa16.33■□□□□ 0.21
NR4A1-221ENST00000565848 GNAT3A8MTJ3 354 aa16.33■□□□□ 0.2
NR4A1-221ENST00000565848 IFNL2Q8IZJ0 200 aa16.33■□□□□ 0.2
NR4A1-221ENST00000565848 EXOC5O00471 708 aa16.32■□□□□ 0.2
NR4A1-221ENST00000565848 GPR162Q16538 588 aa16.32■□□□□ 0.2
NR4A1-221ENST00000565848 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
NR4A1-221ENST00000565848 RREB1Q92766 1687 aa16.31■□□□□ 0.2
NR4A1-221ENST00000565848 LMOD3Q0VAK6 560 aa16.31■□□□□ 0.2
NR4A1-221ENST00000565848 SLC15A2Q16348 729 aa16.31■□□□□ 0.2
NR4A1-221ENST00000565848 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
NR4A1-221ENST00000565848 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
NR4A1-221ENST00000565848 ITGB4P16144 1822 aa16.31■□□□□ 0.2
NR4A1-221ENST00000565848 DOT1LQ8TEK3 1739 aa16.31■□□□□ 0.2
NR4A1-221ENST00000565848 PELP1Q8IZL8 1130 aaKnown RBP16.3■□□□□ 0.2
NR4A1-221ENST00000565848 MARCH10Q8NA82 808 aaPredicted RBP16.3■□□□□ 0.2
NR4A1-221ENST00000565848 SBF2Q86WG5 1849 aa16.3■□□□□ 0.2
NR4A1-221ENST00000565848 PAPPAQ13219 1627 aa16.3■□□□□ 0.2
NR4A1-221ENST00000565848 KDM3BQ7LBC6 1761 aa16.29■□□□□ 0.2
NR4A1-221ENST00000565848 IL16Q14005 1332 aa16.29■□□□□ 0.2
NR4A1-221ENST00000565848 RNMTO43148 476 aaKnown RBP16.29■□□□□ 0.2
NR4A1-221ENST00000565848 NEUROD2Q15784 382 aa16.29■□□□□ 0.2
NR4A1-221ENST00000565848 C1orf141Q5JVX7 400 aa16.29■□□□□ 0.2
NR4A1-221ENST00000565848 WDR63Q8IWG1 891 aa16.29■□□□□ 0.2
NR4A1-221ENST00000565848 DCAF5Q96JK2 942 aa16.29■□□□□ 0.2
NR4A1-221ENST00000565848 ARXQ96QS3 562 aa16.29■□□□□ 0.2
NR4A1-221ENST00000565848 MTFR1LQ9H019 292 aa16.29■□□□□ 0.2
NR4A1-221ENST00000565848 LGR6Q9HBX8 967 aa16.29■□□□□ 0.2
NR4A1-221ENST00000565848 GIGYF1O75420 1035 aaPredicted RBP16.28■□□□□ 0.2
NR4A1-221ENST00000565848 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
NR4A1-221ENST00000565848 ZNF853P0CG23 659 aa16.28■□□□□ 0.2
NR4A1-221ENST00000565848 TRMT2AQ8IZ69 625 aaKnown RBP16.28■□□□□ 0.2
NR4A1-221ENST00000565848 NHSQ6T4R5 1651 aa16.27■□□□□ 0.2
NR4A1-221ENST00000565848 DCTN1Q14203 1278 aa16.27■□□□□ 0.2
NR4A1-221ENST00000565848 MCM10Q7L590 875 aa16.27■□□□□ 0.2
NR4A1-221ENST00000565848 MPRIPQ6WCQ1 1025 aa16.26■□□□□ 0.19
NR4A1-221ENST00000565848 DDX54Q8TDD1 881 aaKnown RBP16.26■□□□□ 0.19
NR4A1-221ENST00000565848 THUMPD2Q9BTF0 503 aaKnown RBP16.26■□□□□ 0.19
NR4A1-221ENST00000565848 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
NR4A1-221ENST00000565848 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
NR4A1-221ENST00000565848 ERVV-2B6SEH9 535 aa16.25■□□□□ 0.19
NR4A1-221ENST00000565848 RTF1Q92541 710 aaKnown RBP16.25■□□□□ 0.19
NR4A1-221ENST00000565848 SALL2Q9Y467 1007 aaPredicted RBP16.25■□□□□ 0.19
NR4A1-221ENST00000565848 SLC52A2Q9HAB3 445 aa16.24■□□□□ 0.19
NR4A1-221ENST00000565848 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
NR4A1-221ENST00000565848 CHL1O00533 1208 aa16.23■□□□□ 0.19
NR4A1-221ENST00000565848 CALD1Q05682 793 aaKnown RBP16.23■□□□□ 0.19
NR4A1-221ENST00000565848 GOLGA2Q08379 1002 aa16.23■□□□□ 0.19
NR4A1-221ENST00000565848 SLFN5Q08AF3 891 aa16.23■□□□□ 0.19
NR4A1-221ENST00000565848 ACSBG1Q96GR2 724 aa16.23■□□□□ 0.19
NR4A1-221ENST00000565848 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
NR4A1-221ENST00000565848 YTHDC1Q96MU7 727 aaKnown RBP16.23■□□□□ 0.19
NR4A1-221ENST00000565848 IFT57Q9NWB7 429 aa16.23■□□□□ 0.19
NR4A1-221ENST00000565848 UTRNP46939 3433 aa16.22■□□□□ 0.19
NR4A1-221ENST00000565848 CDCA7LQ96GN5 454 aa16.22■□□□□ 0.19
NR4A1-221ENST00000565848 SGIP1Q9BQI5 828 aa16.22■□□□□ 0.19
NR4A1-221ENST00000565848 CICQ96RK0 1608 aaPredicted RBP16.21■□□□□ 0.19
NR4A1-221ENST00000565848 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.19
NR4A1-221ENST00000565848 E9PSI1 815 aa16.2■□□□□ 0.18
NR4A1-221ENST00000565848 TAF7Q15545 349 aaPredicted RBP16.2■□□□□ 0.18
NR4A1-221ENST00000565848 HEG1Q9ULI3 1381 aa16.2■□□□□ 0.18
NR4A1-221ENST00000565848 ZNF831Q5JPB2 1677 aa16.2■□□□□ 0.18
NR4A1-221ENST00000565848 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
NR4A1-221ENST00000565848 GNAI1P63096 354 aa16.19■□□□□ 0.18
NR4A1-221ENST00000565848 BTAF1O14981 1849 aa16.19■□□□□ 0.18
NR4A1-221ENST00000565848 TEFQ10587 303 aa16.18■□□□□ 0.18
NR4A1-221ENST00000565848 NFATC2IPQ8NCF5 419 aa16.18■□□□□ 0.18
NR4A1-221ENST00000565848 MBIPQ9NS73 344 aa16.18■□□□□ 0.18
NR4A1-221ENST00000565848 CASZ1Q86V15 1759 aa16.18■□□□□ 0.18
NR4A1-221ENST00000565848 FANCIQ9NVI1 1328 aa16.18■□□□□ 0.18
NR4A1-221ENST00000565848 PIGBQ92521 554 aa16.17■□□□□ 0.18
NR4A1-221ENST00000565848 LY75O60449 1722 aa16.16■□□□□ 0.18
NR4A1-221ENST00000565848 POLD1P28340 1107 aa16.16■□□□□ 0.18
NR4A1-221ENST00000565848 PRIM1P49642 420 aaKnown RBP16.16■□□□□ 0.18
NR4A1-221ENST00000565848 CABP4P57796 275 aa16.16■□□□□ 0.18
NR4A1-221ENST00000565848 ZNF827Q17R98 1081 aa16.15■□□□□ 0.18
NR4A1-221ENST00000565848 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
NR4A1-221ENST00000565848 RGPD3A6NKT7 1758 aaPredicted RBP16.14■□□□□ 0.17
NR4A1-221ENST00000565848 RGPD4Q7Z3J3 1758 aa16.14■□□□□ 0.17
NR4A1-221ENST00000565848 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
NR4A1-221ENST00000565848 ZNF790Q6PG37 636 aa16.14■□□□□ 0.17
NR4A1-221ENST00000565848 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.17
NR4A1-221ENST00000565848 TMOD3Q9NYL9 352 aa16.14■□□□□ 0.17
NR4A1-221ENST00000565848 C5P01031 1676 aa16.14■□□□□ 0.17
NR4A1-221ENST00000565848 LAMB4A4D0S4 1761 aa16.13■□□□□ 0.17
NR4A1-221ENST00000565848 KCNQ3O43525 872 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms