RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ACSBG1Q96GR2 724 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 BACH2Q9BYV9 841 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 BRPF3Q9ULD4 1205 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 SLIT1O75093 1534 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 PEAK1Q9H792 1746 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 CPA1P15085 419 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 NCBP3Q53F19 620 aaKnown RBP4.14□□□□□ -1.75
CHD9-213ENST00000564845 KIF16BQ96L93 1317 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 RILPL2Q969X0 211 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 ADAMTS7Q9UKP4 1686 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 PROSER2Q86WR7 435 aaPredicted RBP4.14□□□□□ -1.75
CHD9-213ENST00000564845 TMX4Q9H1E5 349 aaPredicted RBP4.14□□□□□ -1.75
CHD9-213ENST00000564845 TSPYL4Q9UJ04 414 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 PKP1Q13835 747 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 SIRT2Q8IXJ6 389 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 ATP6V1DQ9Y5K8 247 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 RGPD8O14715 1765 aaPredicted RBP4.14□□□□□ -1.75
CHD9-213ENST00000564845 DZIP1LQ8IYY4 767 aaKnown RBP4.14□□□□□ -1.75
CHD9-213ENST00000564845 CNPY4Q8N129 248 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 ZBTB9Q96C00 473 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 TCEANC2Q96MN5 208 aa4.14□□□□□ -1.75
CHD9-213ENST00000564845 MUC3AQ02505 3323 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 NLRP2Q9NX02 1062 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 CHMP3Q9Y3E7 222 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 ZNF335Q9H4Z2 1342 aaPredicted RBP4.13□□□□□ -1.75
CHD9-213ENST00000564845 FKBP5Q13451 457 aaPredicted RBP4.13□□□□□ -1.75
CHD9-213ENST00000564845 LRRC7Q96NW7 1537 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 PNMA6EA0A0J9YXQ4 647 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 WTIPA6NIX2 430 aaPredicted RBP4.13□□□□□ -1.75
CHD9-213ENST00000564845 PHF14O94880 888 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 IL25Q9H293 177 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 IPO9Q96P70 1041 aaKnown RBP4.13□□□□□ -1.75
CHD9-213ENST00000564845 OVOS2A0A0J9YW53 1432 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 OVOS2Q6IE36 1432 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 UBR1Q8IWV7 1749 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 TTC21BQ7Z4L5 1316 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 KIF1BO60333 1816 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 IL13P35225 146 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 PPP6R1Q9UPN7 881 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 XRN1Q8IZH2 1706 aaKnown RBP4.13□□□□□ -1.75
CHD9-213ENST00000564845 PIK3R4Q99570 1358 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 PHRF1Q9P1Y6 1649 aaKnown RBP4.13□□□□□ -1.75
CHD9-213ENST00000564845 NFATC2IPQ8NCF5 419 aa4.13□□□□□ -1.75
CHD9-213ENST00000564845 EID1Q9Y6B2 187 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 CCDC61Q9Y6R9 512 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 PTF1AQ7RTS3 328 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 UNC5CLQ8IV45 518 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 MCCP23508 829 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 HSP90AA2PQ14568 343 aaPredicted RBP4.12□□□□□ -1.75
CHD9-213ENST00000564845 RAB11FIP4Q86YS3 637 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 PRUNE2Q8WUY3 3088 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 NBPF7P0C2Y1 421 aaPredicted RBP4.12□□□□□ -1.75
CHD9-213ENST00000564845 CHPF2Q9P2E5 772 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 KAT6BQ8WYB5 2073 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 DIP2AQ14689 1571 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 DDIT3P35638 169 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 TRIM6-TRIM34B2RNG4 842 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 JAG2Q9Y219 1238 aa4.12□□□□□ -1.75
CHD9-213ENST00000564845 MON2Q7Z3U7 1717 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 ANKRD36BQ8N2N9 1353 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 PLCD3Q8N3E9 789 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 IL17REQ8NFR9 667 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 KDRP35968 1356 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 A0A0G2JLW4 131 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 CAGE1Q8TC20 777 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 ATF7IPQ6VMQ6 1270 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 RTF1Q92541 710 aaKnown RBP4.11□□□□□ -1.75
CHD9-213ENST00000564845 ATP10DQ9P241 1426 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 RDXP35241 583 aaKnown RBP4.11□□□□□ -1.75
CHD9-213ENST00000564845 TXLNBQ8N3L3 684 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 MSH6P52701 1360 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 TNRQ92752 1358 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 TUBGCP6Q96RT7 1819 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 LRRC37A3O60309 1634 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 GDPD2Q9HCC8 539 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 VAMP4O75379 141 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 ZNF853P0CG23 659 aa4.11□□□□□ -1.75
CHD9-213ENST00000564845 NFKBIBQ15653 356 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 MVPQ14764 893 aaKnown RBP4.1□□□□□ -1.75
CHD9-213ENST00000564845 SLC52A1Q9NWF4 448 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 FAM135BQ49AJ0 1406 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.1□□□□□ -1.75
CHD9-213ENST00000564845 CEP170BQ9Y4F5 1589 aaPredicted RBP4.1□□□□□ -1.75
CHD9-213ENST00000564845 ZKSCAN2Q63HK3 967 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 CCDC8Q9H0W5 538 aaPredicted RBP4.1□□□□□ -1.75
CHD9-213ENST00000564845 ZNF692Q9BU19 519 aaPredicted RBP4.1□□□□□ -1.75
CHD9-213ENST00000564845 VPS13AQ96RL7 3174 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 LMO7Q8WWI1 1683 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 ASPMQ8IZT6 3477 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 HOXC9P31274 260 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 BICDL1Q6ZP65 573 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 CHST3Q7LGC8 479 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 DNAI2Q9GZS0 605 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 TLR7Q9NYK1 1049 aaKnown RBP4.1□□□□□ -1.75
CHD9-213ENST00000564845 ZNF594Q96JF6 807 aaPredicted RBP4.1□□□□□ -1.75
CHD9-213ENST00000564845 IPO8O15397 1037 aaKnown RBP4.1□□□□□ -1.75
CHD9-213ENST00000564845 KRT28Q7Z3Y7 464 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 KIF2CQ99661 725 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 ANTXR1Q9H6X2 564 aa4.1□□□□□ -1.75
CHD9-213ENST00000564845 KIAA2012Q0VF49 1180 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms