RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
CNOT1-206ENST00000564557 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
CNOT1-206ENST00000564557 LY75O60449 1722 aa18.24■□□□□ 0.51
CNOT1-206ENST00000564557 ZBTB7AO95365 584 aa18.24■□□□□ 0.51
CNOT1-206ENST00000564557 NEFMP07197 916 aa18.24■□□□□ 0.51
CNOT1-206ENST00000564557 ZNF827Q17R98 1081 aa18.24■□□□□ 0.51
CNOT1-206ENST00000564557 MTHFSDQ2M296 383 aaKnown RBP18.24■□□□□ 0.51
CNOT1-206ENST00000564557 GAS2L2Q8NHY3 880 aa18.24■□□□□ 0.51
CNOT1-206ENST00000564557 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
CNOT1-206ENST00000564557 ASAP1Q9ULH1 1129 aa18.24■□□□□ 0.51
CNOT1-206ENST00000564557 LOC102724428A0A0B4J2F2 783 aa18.23■□□□□ 0.51
CNOT1-206ENST00000564557 SIK1P57059 783 aa18.23■□□□□ 0.51
CNOT1-206ENST00000564557 NFATC2IPQ8NCF5 419 aa18.23■□□□□ 0.51
CNOT1-206ENST00000564557 RBM42Q9BTD8 480 aaKnown RBP18.23■□□□□ 0.51
CNOT1-206ENST00000564557 ATF5Q9Y2D1 282 aaPredicted RBP18.23■□□□□ 0.51
CNOT1-206ENST00000564557 LRP5O75197 1615 aa18.23■□□□□ 0.51
CNOT1-206ENST00000564557 PRKAR2BP31323 418 aa18.22■□□□□ 0.51
CNOT1-206ENST00000564557 ATP6V1AP38606 617 aa18.22■□□□□ 0.51
CNOT1-206ENST00000564557 ATG3Q9NT62 314 aa18.22■□□□□ 0.51
CNOT1-206ENST00000564557 FCHSD2O94868 740 aa18.21■□□□□ 0.51
CNOT1-206ENST00000564557 DSG3P32926 999 aa18.21■□□□□ 0.51
CNOT1-206ENST00000564557 AK7Q96M32 723 aa18.21■□□□□ 0.51
CNOT1-206ENST00000564557 PDGFDQ9GZP0 370 aaPredicted RBP18.21■□□□□ 0.51
CNOT1-206ENST00000564557 MTFR1LQ9H019 292 aa18.21■□□□□ 0.51
CNOT1-206ENST00000564557 KDM6AO15550 1401 aaPredicted RBP18.21■□□□□ 0.51
CNOT1-206ENST00000564557 GNAT3A8MTJ3 354 aa18.2■□□□□ 0.5
CNOT1-206ENST00000564557 RNMTO43148 476 aaKnown RBP18.2■□□□□ 0.5
CNOT1-206ENST00000564557 ATXN8OSP0DMR3 200 aa18.2■□□□□ 0.5
CNOT1-206ENST00000564557 PAPPAQ13219 1627 aa18.2■□□□□ 0.5
CNOT1-206ENST00000564557 FLAD1Q8NFF5 587 aa18.19■□□□□ 0.5
CNOT1-206ENST00000564557 SLC16A10Q8TF71 515 aa18.19■□□□□ 0.5
CNOT1-206ENST00000564557 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
CNOT1-206ENST00000564557 LGR6Q9HBX8 967 aa18.19■□□□□ 0.5
CNOT1-206ENST00000564557 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
CNOT1-206ENST00000564557 SLC52A2Q9HAB3 445 aa18.18■□□□□ 0.5
CNOT1-206ENST00000564557 PTCD1O75127 700 aaKnown RBP18.17■□□□□ 0.5
CNOT1-206ENST00000564557 TEFQ10587 303 aa18.17■□□□□ 0.5
CNOT1-206ENST00000564557 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
CNOT1-206ENST00000564557 PNPLA7Q6ZV29 1317 aa18.17■□□□□ 0.5
CNOT1-206ENST00000564557 MYBBP1AQ9BQG0 1328 aaKnown RBP18.17■□□□□ 0.5
CNOT1-206ENST00000564557 ZNF316A6NFI3 1004 aaPredicted RBP18.16■□□□□ 0.5
CNOT1-206ENST00000564557 PHACTR3Q96KR7 559 aa18.16■□□□□ 0.5
CNOT1-206ENST00000564557 CASZ1Q86V15 1759 aa18.16■□□□□ 0.5
CNOT1-206ENST00000564557 MAP3K5Q99683 1374 aa18.16■□□□□ 0.5
CNOT1-206ENST00000564557 C5P01031 1676 aa18.15■□□□□ 0.5
CNOT1-206ENST00000564557 SCN11AQ9UI33 1791 aa18.15■□□□□ 0.5
CNOT1-206ENST00000564557 POLD1P28340 1107 aa18.15■□□□□ 0.5
CNOT1-206ENST00000564557 TTC5Q8N0Z6 440 aa18.14■□□□□ 0.49
CNOT1-206ENST00000564557 LINC00116Q8NCU8 138 aa18.14■□□□□ 0.49
CNOT1-206ENST00000564557 GNPATO15228 680 aa18.13■□□□□ 0.49
CNOT1-206ENST00000564557 PHF14O94880 888 aa18.13■□□□□ 0.49
CNOT1-206ENST00000564557 ITPK1Q13572 414 aa18.13■□□□□ 0.49
CNOT1-206ENST00000564557 COL23A1Q86Y22 540 aaPredicted RBP18.13■□□□□ 0.49
CNOT1-206ENST00000564557 MAPK8IP3Q9UPT6 1336 aa18.13■□□□□ 0.49
CNOT1-206ENST00000564557 TAF1LQ8IZX4 1826 aa18.12■□□□□ 0.49
CNOT1-206ENST00000564557 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
CNOT1-206ENST00000564557 QSER1Q2KHR3 1735 aa18.12■□□□□ 0.49
CNOT1-206ENST00000564557 SSFA2P28290 1259 aa18.11■□□□□ 0.49
CNOT1-206ENST00000564557 PTGER2P43116 358 aa18.11■□□□□ 0.49
CNOT1-206ENST00000564557 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
CNOT1-206ENST00000564557 IL17REQ8NFR9 667 aa18.11■□□□□ 0.49
CNOT1-206ENST00000564557 RTCBQ9Y3I0 505 aaKnown RBP18.11■□□□□ 0.49
CNOT1-206ENST00000564557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.1■□□□□ 0.49
CNOT1-206ENST00000564557 WDR43Q15061 677 aaKnown RBP eCLIP18.1■□□□□ 0.49
CNOT1-206ENST00000564557 ARXQ96QS3 562 aa18.1■□□□□ 0.49
CNOT1-206ENST00000564557 PRKRIP1Q9H875 184 aaPredicted RBP18.1■□□□□ 0.49
CNOT1-206ENST00000564557 RC3H1Q5TC82 1133 aaKnown RBP18.09■□□□□ 0.49
CNOT1-206ENST00000564557 SLC4A9Q96Q91 983 aa18.09■□□□□ 0.49
CNOT1-206ENST00000564557 SRCAPQ6ZRS2 3230 aa18.09■□□□□ 0.49
CNOT1-206ENST00000564557 VIRMAQ69YN4 1812 aaKnown RBP18.08■□□□□ 0.48
CNOT1-206ENST00000564557 TUBGCP6Q96RT7 1819 aa18.08■□□□□ 0.48
CNOT1-206ENST00000564557 HTATSF1O43719 755 aaKnown RBP18.08■□□□□ 0.48
CNOT1-206ENST00000564557 TRAPPC3LQ5T215 181 aa18.08■□□□□ 0.48
CNOT1-206ENST00000564557 KLHL34Q8N239 644 aa18.08■□□□□ 0.48
CNOT1-206ENST00000564557 BTBD11A6QL63 1104 aa18.07■□□□□ 0.48
CNOT1-206ENST00000564557 ABCB7O75027 752 aa18.07■□□□□ 0.48
CNOT1-206ENST00000564557 MSL1Q68DK7 614 aa18.07■□□□□ 0.48
CNOT1-206ENST00000564557 MRC1P22897 1456 aa18.07■□□□□ 0.48
CNOT1-206ENST00000564557 CNTNAP4Q9C0A0 1308 aa18.06■□□□□ 0.48
CNOT1-206ENST00000564557 MCM10Q7L590 875 aa18.06■□□□□ 0.48
CNOT1-206ENST00000564557 RPS6KA4O75676 772 aa18.05■□□□□ 0.48
CNOT1-206ENST00000564557 RFC4P35249 363 aa18.05■□□□□ 0.48
CNOT1-206ENST00000564557 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
CNOT1-206ENST00000564557 ZNF790Q6PG37 636 aa18.05■□□□□ 0.48
CNOT1-206ENST00000564557 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
CNOT1-206ENST00000564557 SGIP1Q9BQI5 828 aa18.05■□□□□ 0.48
CNOT1-206ENST00000564557 ZNF831Q5JPB2 1677 aa18.05■□□□□ 0.48
CNOT1-206ENST00000564557 ADAMTS7Q9UKP4 1686 aa18.04■□□□□ 0.48
CNOT1-206ENST00000564557 NFE2L2Q16236 605 aa18.04■□□□□ 0.48
CNOT1-206ENST00000564557 SMIM5Q71RC9 77 aa18.04■□□□□ 0.48
CNOT1-206ENST00000564557 VSIG10Q8N0Z9 540 aa18.04■□□□□ 0.48
CNOT1-206ENST00000564557 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
CNOT1-206ENST00000564557 FHDC1Q9C0D6 1143 aaPredicted RBP18.04■□□□□ 0.48
CNOT1-206ENST00000564557 CEMIPQ8WUJ3 1361 aa18.04■□□□□ 0.48
CNOT1-206ENST00000564557 STARD3NLO95772 234 aa18.03■□□□□ 0.48
CNOT1-206ENST00000564557 DCTN1Q14203 1278 aa18.03■□□□□ 0.48
CNOT1-206ENST00000564557 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
CNOT1-206ENST00000564557 TEX13AQ9BXU3 409 aaPredicted RBP18.03■□□□□ 0.48
CNOT1-206ENST00000564557 UBR3Q6ZT12 1888 aa18.03■□□□□ 0.48
CNOT1-206ENST00000564557 ANP32CO43423 234 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms