RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 IFT57Q9NWB7 429 aa11.36□□□□□ -0.59
TCF4-224ENST00000564403 PSME1Q06323 249 aa11.36□□□□□ -0.59
TCF4-224ENST00000564403 TTC36A6NLP5 189 aa11.35□□□□□ -0.59
TCF4-224ENST00000564403 CEP120Q8N960 986 aa11.35□□□□□ -0.59
TCF4-224ENST00000564403 PDZRN3Q9UPQ7 1066 aa11.35□□□□□ -0.59
TCF4-224ENST00000564403 XRN1Q8IZH2 1706 aaKnown RBP11.35□□□□□ -0.59
TCF4-224ENST00000564403 UTP14CQ5TAP6 766 aaKnown RBP11.35□□□□□ -0.59
TCF4-224ENST00000564403 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
TCF4-224ENST00000564403 SETD1BQ9UPS6 1966 aaKnown RBP11.35□□□□□ -0.59
TCF4-224ENST00000564403 HOXC9P31274 260 aa11.34□□□□□ -0.59
TCF4-224ENST00000564403 FOXD4L6Q3SYB3 417 aaPredicted RBP11.34□□□□□ -0.59
TCF4-224ENST00000564403 DNTTIP2Q5QJE6 756 aaKnown RBP11.34□□□□□ -0.59
TCF4-224ENST00000564403 FOXD4L3Q6VB84 417 aaPredicted RBP11.34□□□□□ -0.59
TCF4-224ENST00000564403 DLG5Q8TDM6 1919 aa11.34□□□□□ -0.59
TCF4-224ENST00000564403 SEC24BO95487 1268 aa11.34□□□□□ -0.59
TCF4-224ENST00000564403 SLC4A3P48751 1232 aa11.34□□□□□ -0.59
TCF4-224ENST00000564403 TRIM44Q96DX7 344 aaPredicted RBP11.34□□□□□ -0.59
TCF4-224ENST00000564403 FAM161AQ3B820 660 aa11.33□□□□□ -0.59
TCF4-224ENST00000564403 DDX17Q92841 729 aaKnown RBP11.33□□□□□ -0.59
TCF4-224ENST00000564403 FLT4P35916 1363 aa11.33□□□□□ -0.6
TCF4-224ENST00000564403 HSPA2P54652 639 aa11.33□□□□□ -0.6
TCF4-224ENST00000564403 ALDH1L2Q3SY69 923 aa11.33□□□□□ -0.6
TCF4-224ENST00000564403 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
TCF4-224ENST00000564403 PIK3R4Q99570 1358 aa11.33□□□□□ -0.6
TCF4-224ENST00000564403 IPO8O15397 1037 aaKnown RBP11.32□□□□□ -0.6
TCF4-224ENST00000564403 LMOD3Q0VAK6 560 aa11.32□□□□□ -0.6
TCF4-224ENST00000564403 ZBTB47Q9UFB7 747 aaPredicted RBP11.32□□□□□ -0.6
TCF4-224ENST00000564403 DDX19BQ9UMR2 479 aa11.32□□□□□ -0.6
TCF4-224ENST00000564403 PIK3C2AO00443 1686 aa11.32□□□□□ -0.6
TCF4-224ENST00000564403 SBNO1A3KN83 1393 aa11.32□□□□□ -0.6
TCF4-224ENST00000564403 PROSER2Q86WR7 435 aaPredicted RBP11.32□□□□□ -0.6
TCF4-224ENST00000564403 RWDD1Q9H446 243 aaPredicted RBP11.32□□□□□ -0.6
TCF4-224ENST00000564403 KIF16BQ96L93 1317 aa11.32□□□□□ -0.6
TCF4-224ENST00000564403 CHL1O00533 1208 aa11.32□□□□□ -0.6
TCF4-224ENST00000564403 NPHP4O75161 1426 aaPredicted RBP11.31□□□□□ -0.6
TCF4-224ENST00000564403 ADAMTSL3P82987 1691 aa11.31□□□□□ -0.6
TCF4-224ENST00000564403 EXOC8Q8IYI6 725 aa11.31□□□□□ -0.6
TCF4-224ENST00000564403 LRRC59Q96AG4 307 aaKnown RBP11.31□□□□□ -0.6
TCF4-224ENST00000564403 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
TCF4-224ENST00000564403 ANKARQ7Z5J8 1434 aa11.3□□□□□ -0.6
TCF4-224ENST00000564403 IGSF1Q8N6C5 1336 aa11.3□□□□□ -0.6
TCF4-224ENST00000564403 ZBTB7BO15156 539 aaPredicted RBP11.3□□□□□ -0.6
TCF4-224ENST00000564403 CHD2O14647 1828 aaKnown RBP11.3□□□□□ -0.6
TCF4-224ENST00000564403 NBPF6Q5VWK0 638 aa11.3□□□□□ -0.6
TCF4-224ENST00000564403 RTF1Q92541 710 aaKnown RBP11.3□□□□□ -0.6
TCF4-224ENST00000564403 NBPF4Q96M43 638 aa11.3□□□□□ -0.6
TCF4-224ENST00000564403 LOC102724159A0A0B4J2E5 919 aa11.29□□□□□ -0.6
TCF4-224ENST00000564403 PWP2Q15269 919 aaKnown RBP11.29□□□□□ -0.6
TCF4-224ENST00000564403 TSPYL4Q9UJ04 414 aa11.29□□□□□ -0.6
TCF4-224ENST00000564403 GSE1Q14687 1217 aa11.28□□□□□ -0.6
TCF4-224ENST00000564403 IL17REQ8NFR9 667 aa11.28□□□□□ -0.6
TCF4-224ENST00000564403 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
TCF4-224ENST00000564403 RRAGDQ9NQL2 400 aaPredicted RBP11.28□□□□□ -0.6
TCF4-224ENST00000564403 SLC4A2P04920 1241 aa11.27□□□□□ -0.6
TCF4-224ENST00000564403 G2E3Q7L622 706 aa11.27□□□□□ -0.6
TCF4-224ENST00000564403 LNPKQ9C0E8 428 aa11.27□□□□□ -0.6
TCF4-224ENST00000564403 CRB1P82279 1406 aa11.27□□□□□ -0.61
TCF4-224ENST00000564403 ADGRL3Q9HAR2 1447 aa11.27□□□□□ -0.61
TCF4-224ENST00000564403 ARHGEF10O15013 1369 aa11.27□□□□□ -0.61
TCF4-224ENST00000564403 KDRP35968 1356 aa11.27□□□□□ -0.61
TCF4-224ENST00000564403 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
TCF4-224ENST00000564403 SIRT2Q8IXJ6 389 aa11.27□□□□□ -0.61
TCF4-224ENST00000564403 F6X3S4 739 aa11.26□□□□□ -0.61
TCF4-224ENST00000564403 GCP02774 474 aa11.26□□□□□ -0.61
TCF4-224ENST00000564403 HSP90AB3PQ58FF7 597 aa11.26□□□□□ -0.61
TCF4-224ENST00000564403 AXIN2Q9Y2T1 843 aa11.26□□□□□ -0.61
TCF4-224ENST00000564403 RGPD1P0DJD0 1748 aa11.26□□□□□ -0.61
TCF4-224ENST00000564403 ZC3H6P61129 1189 aaKnown RBP11.26□□□□□ -0.61
TCF4-224ENST00000564403 DMTNQ08495 405 aa11.26□□□□□ -0.61
TCF4-224ENST00000564403 HDAC1Q13547 482 aaPredicted RBP11.26□□□□□ -0.61
TCF4-224ENST00000564403 PIAS4Q8N2W9 510 aaPredicted RBP11.26□□□□□ -0.61
TCF4-224ENST00000564403 RINLQ6ZS11 566 aa11.25□□□□□ -0.61
TCF4-224ENST00000564403 IP6K1Q92551 441 aa11.25□□□□□ -0.61
TCF4-224ENST00000564403 LGR6Q9HBX8 967 aa11.25□□□□□ -0.61
TCF4-224ENST00000564403 USP19O94966 1318 aa11.25□□□□□ -0.61
TCF4-224ENST00000564403 GNAT3A8MTJ3 354 aa11.25□□□□□ -0.61
TCF4-224ENST00000564403 KRT28Q7Z3Y7 464 aa11.25□□□□□ -0.61
TCF4-224ENST00000564403 CABLES1Q8TDN4 633 aa11.25□□□□□ -0.61
TCF4-224ENST00000564403 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
TCF4-224ENST00000564403 ABCC4O15439 1325 aa11.25□□□□□ -0.61
TCF4-224ENST00000564403 MARF1Q9Y4F3 1742 aaKnown RBP11.25□□□□□ -0.61
TCF4-224ENST00000564403 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
TCF4-224ENST00000564403 SLC4A10Q6U841 1118 aa11.24□□□□□ -0.61
TCF4-224ENST00000564403 GAS2L2Q8NHY3 880 aa11.24□□□□□ -0.61
TCF4-224ENST00000564403 SMC5Q8IY18 1101 aa11.24□□□□□ -0.61
TCF4-224ENST00000564403 ZNF142P52746 1687 aaPredicted RBP11.24□□□□□ -0.61
TCF4-224ENST00000564403 ANKRD45Q5TZF3 282 aa11.23□□□□□ -0.61
TCF4-224ENST00000564403 C19orf44Q9H6X5 657 aa11.23□□□□□ -0.61
TCF4-224ENST00000564403 GEMIN8Q9NWZ8 242 aaKnown RBP11.23□□□□□ -0.61
TCF4-224ENST00000564403 CCDC96Q2M329 555 aa11.23□□□□□ -0.61
TCF4-224ENST00000564403 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 CASC1Q6TDU7 716 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 TSHZ1Q6ZSZ6 1077 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 CHMP4CQ96CF2 233 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 NWD1Q149M9 1564 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 KCNQ3O43525 872 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 ZNF500O60304 480 aaPredicted RBP11.22□□□□□ -0.61
TCF4-224ENST00000564403 TAF3Q5VWG9 929 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 MPRIPQ6WCQ1 1025 aa11.22□□□□□ -0.61
TCF4-224ENST00000564403 OTUD6BQ8N6M0 293 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms