RNA–Protein interactions for RNA: ENST00000564316.1

STUB1-203, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 3

Gene STUB1, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-203ENST00000564316 SCN11AQ9UI33 1791 aa18.14■□□□□ 0.5
STUB1-203ENST00000564316 BTAF1O14981 1849 aa18.14■□□□□ 0.5
STUB1-203ENST00000564316 SMARCC1Q92922 1105 aaPredicted RBP18.14■□□□□ 0.49
STUB1-203ENST00000564316 THUMPD2Q9BTF0 503 aaKnown RBP18.14■□□□□ 0.49
STUB1-203ENST00000564316 ATG3Q9NT62 314 aa18.14■□□□□ 0.49
STUB1-203ENST00000564316 ASAP1Q9ULH1 1129 aa18.14■□□□□ 0.49
STUB1-203ENST00000564316 TRIM35Q9UPQ4 493 aa18.14■□□□□ 0.49
STUB1-203ENST00000564316 PALLDQ8WX93 1383 aa18.14■□□□□ 0.49
STUB1-203ENST00000564316 KAT6BQ8WYB5 2073 aa18.13■□□□□ 0.49
STUB1-203ENST00000564316 ITGB4P16144 1822 aa18.12■□□□□ 0.49
STUB1-203ENST00000564316 TXNRD1Q16881 649 aa18.12■□□□□ 0.49
STUB1-203ENST00000564316 SENP3-EIF4A1A0A087X0R7 540 aa18.11■□□□□ 0.49
STUB1-203ENST00000564316 PROM2Q8N271 834 aa18.11■□□□□ 0.49
STUB1-203ENST00000564316 SLC39A6Q13433 755 aa18.1■□□□□ 0.49
STUB1-203ENST00000564316 BTBD11A6QL63 1104 aa18.09■□□□□ 0.49
STUB1-203ENST00000564316 TAF7Q15545 349 aaPredicted RBP18.09■□□□□ 0.49
STUB1-203ENST00000564316 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
STUB1-203ENST00000564316 SLC27A3Q5K4L6 730 aa18.09■□□□□ 0.49
STUB1-203ENST00000564316 DLG5Q8TDM6 1919 aa18.09■□□□□ 0.49
STUB1-203ENST00000564316 RGPD3A6NKT7 1758 aaPredicted RBP18.09■□□□□ 0.49
STUB1-203ENST00000564316 RGPD4Q7Z3J3 1758 aa18.09■□□□□ 0.49
STUB1-203ENST00000564316 CCDC27Q2M243 656 aa18.08■□□□□ 0.48
STUB1-203ENST00000564316 CCNL1Q9UK58 526 aaPredicted RBP18.08■□□□□ 0.48
STUB1-203ENST00000564316 LOC102724428A0A0B4J2F2 783 aa18.07■□□□□ 0.48
STUB1-203ENST00000564316 SIK1P57059 783 aa18.07■□□□□ 0.48
STUB1-203ENST00000564316 ZNF790Q6PG37 636 aa18.07■□□□□ 0.48
STUB1-203ENST00000564316 TTC5Q8N0Z6 440 aa18.07■□□□□ 0.48
STUB1-203ENST00000564316 LRRC4BQ9NT99 713 aa18.07■□□□□ 0.48
STUB1-203ENST00000564316 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
STUB1-203ENST00000564316 KCNQ4P56696 695 aa18.06■□□□□ 0.48
STUB1-203ENST00000564316 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
STUB1-203ENST00000564316 SALL2Q9Y467 1007 aaPredicted RBP18.06■□□□□ 0.48
STUB1-203ENST00000564316 WWC1Q8IX03 1113 aa18.05■□□□□ 0.48
STUB1-203ENST00000564316 NGEFQ8N5V2 710 aa18.05■□□□□ 0.48
STUB1-203ENST00000564316 SLC4A9Q96Q91 983 aa18.05■□□□□ 0.48
STUB1-203ENST00000564316 MIS18AQ9NYP9 233 aa18.05■□□□□ 0.48
STUB1-203ENST00000564316 PAPPAQ13219 1627 aa18.05■□□□□ 0.48
STUB1-203ENST00000564316 VIRMAQ69YN4 1812 aaKnown RBP18.05■□□□□ 0.48
STUB1-203ENST00000564316 SIPA1L3O60292 1781 aaPredicted RBP18.04■□□□□ 0.48
STUB1-203ENST00000564316 LY75O60449 1722 aa18.04■□□□□ 0.48
STUB1-203ENST00000564316 RREB1Q92766 1687 aa18.04■□□□□ 0.48
STUB1-203ENST00000564316 KCNQ3O43525 872 aa18.04■□□□□ 0.48
STUB1-203ENST00000564316 ATP6V1AP38606 617 aa18.04■□□□□ 0.48
STUB1-203ENST00000564316 CALD1Q05682 793 aaKnown RBP18.04■□□□□ 0.48
STUB1-203ENST00000564316 KCPQ6ZWJ8 1503 aa18.03■□□□□ 0.48
STUB1-203ENST00000564316 ZNF496Q96IT1 587 aaPredicted RBP18.03■□□□□ 0.48
STUB1-203ENST00000564316 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
STUB1-203ENST00000564316 TSPYL4Q9UJ04 414 aa18.03■□□□□ 0.48
STUB1-203ENST00000564316 ITPK1Q13572 414 aa18.02■□□□□ 0.48
STUB1-203ENST00000564316 FMNL2Q96PY5 1086 aa18.02■□□□□ 0.48
STUB1-203ENST00000564316 CHL1O00533 1208 aa18.01■□□□□ 0.47
STUB1-203ENST00000564316 CFAP44Q96MT7 982 aa18.01■□□□□ 0.47
STUB1-203ENST00000564316 ANO8Q9HCE9 1232 aaPredicted RBP18.01■□□□□ 0.47
STUB1-203ENST00000564316 IFT57Q9NWB7 429 aa18.01■□□□□ 0.47
STUB1-203ENST00000564316 LAS1LQ9Y4W2 734 aaKnown RBP18.01■□□□□ 0.47
STUB1-203ENST00000564316 ZNF853P0CG23 659 aa18■□□□□ 0.47
STUB1-203ENST00000564316 NBPF14Q5TI25 921 aa18■□□□□ 0.47
STUB1-203ENST00000564316 VSIG10Q8N0Z9 540 aa18■□□□□ 0.47
STUB1-203ENST00000564316 HEG1Q9ULI3 1381 aa18■□□□□ 0.47
STUB1-203ENST00000564316 NUP188Q5SRE5 1749 aa18■□□□□ 0.47
STUB1-203ENST00000564316 HMGB2P26583 209 aaKnown RBP17.99■□□□□ 0.47
STUB1-203ENST00000564316 GNAI1P63096 354 aa17.99■□□□□ 0.47
STUB1-203ENST00000564316 WDR63Q8IWG1 891 aa17.99■□□□□ 0.47
STUB1-203ENST00000564316 LINC00116Q8NCU8 138 aa17.99■□□□□ 0.47
STUB1-203ENST00000564316 IL16Q14005 1332 aa17.98■□□□□ 0.47
STUB1-203ENST00000564316 EIF4A1P60842 406 aaKnown RBP17.98■□□□□ 0.47
STUB1-203ENST00000564316 ZNF827Q17R98 1081 aa17.98■□□□□ 0.47
STUB1-203ENST00000564316 DNAJC10Q8IXB1 793 aa17.98■□□□□ 0.47
STUB1-203ENST00000564316 AKT1S1Q96B36 256 aa17.98■□□□□ 0.47
STUB1-203ENST00000564316 STK32BQ9NY57 414 aa17.98■□□□□ 0.47
STUB1-203ENST00000564316 UBR2Q8IWV8 1755 aa17.98■□□□□ 0.47
STUB1-203ENST00000564316 ZNF521Q96K83 1311 aa17.98■□□□□ 0.47
STUB1-203ENST00000564316 MBIPQ9NS73 344 aa17.97■□□□□ 0.47
STUB1-203ENST00000564316 KDM3BQ7LBC6 1761 aa17.96■□□□□ 0.47
STUB1-203ENST00000564316 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
STUB1-203ENST00000564316 SNRPA1P09661 255 aaKnown RBP17.96■□□□□ 0.47
STUB1-203ENST00000564316 SLC15A2Q16348 729 aa17.96■□□□□ 0.47
STUB1-203ENST00000564316 TEX13AQ9BXU3 409 aaPredicted RBP17.95■□□□□ 0.46
STUB1-203ENST00000564316 CNTNAP4Q9C0A0 1308 aa17.95■□□□□ 0.46
STUB1-203ENST00000564316 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
STUB1-203ENST00000564316 C5P01031 1676 aa17.94■□□□□ 0.46
STUB1-203ENST00000564316 PRAMEF22A3QJZ6 481 aa17.94■□□□□ 0.46
STUB1-203ENST00000564316 CYP19A1P11511 503 aaPredicted RBP17.94■□□□□ 0.46
STUB1-203ENST00000564316 HNRNPUQ00839 825 aaKnown RBP eCLIP17.94■□□□□ 0.46
STUB1-203ENST00000564316 AK7Q96M32 723 aa17.94■□□□□ 0.46
STUB1-203ENST00000564316 TJP1Q07157 1748 aa17.94■□□□□ 0.46
STUB1-203ENST00000564316 GIGYF1O75420 1035 aaPredicted RBP17.93■□□□□ 0.46
STUB1-203ENST00000564316 STARD3NLO95772 234 aa17.93■□□□□ 0.46
STUB1-203ENST00000564316 CRKLP46109 303 aaKnown RBP17.93■□□□□ 0.46
STUB1-203ENST00000564316 R3HDM1Q15032 1099 aaKnown RBP17.93■□□□□ 0.46
STUB1-203ENST00000564316 RC3H1Q5TC82 1133 aaKnown RBP17.93■□□□□ 0.46
STUB1-203ENST00000564316 SPINK5Q9NQ38 1064 aaPredicted RBP17.93■□□□□ 0.46
STUB1-203ENST00000564316 TFCP2L1Q9NZI6 479 aa17.93■□□□□ 0.46
STUB1-203ENST00000564316 C4BP0C0L5 1744 aa17.92■□□□□ 0.46
STUB1-203ENST00000564316 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
STUB1-203ENST00000564316 TSR2Q969E8 191 aaKnown RBP17.92■□□□□ 0.46
STUB1-203ENST00000564316 USP16Q9Y5T5 823 aa17.92■□□□□ 0.46
STUB1-203ENST00000564316 PSDA5PKW4 1024 aaPredicted RBP17.91■□□□□ 0.46
STUB1-203ENST00000564316 GNPATO15228 680 aa17.91■□□□□ 0.46
STUB1-203ENST00000564316 GOLGA2Q08379 1002 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms