RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 FAM187AA6NFU0 413 aa11.9□□□□□ -0.5
SMG1-209ENST00000563836 IRF5Q13568 498 aa11.9□□□□□ -0.5
SMG1-209ENST00000563836 MAP3K4Q9Y6R4 1608 aa11.89□□□□□ -0.51
SMG1-209ENST00000563836 ADGRL2O95490 1459 aa11.89□□□□□ -0.51
SMG1-209ENST00000563836 SPAG9O60271 1321 aaKnown RBP11.89□□□□□ -0.51
SMG1-209ENST00000563836 DIP2BQ9P265 1576 aa11.89□□□□□ -0.51
SMG1-209ENST00000563836 MAST1Q9Y2H9 1570 aa11.89□□□□□ -0.51
SMG1-209ENST00000563836 NAIPQ13075 1403 aa11.89□□□□□ -0.51
SMG1-209ENST00000563836 SCAPERQ9BY12 1400 aa11.89□□□□□ -0.51
SMG1-209ENST00000563836 NR1H3Q13133 447 aa11.89□□□□□ -0.51
SMG1-209ENST00000563836 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
SMG1-209ENST00000563836 PTPRKQ15262 1439 aa11.88□□□□□ -0.51
SMG1-209ENST00000563836 PKDCCQ504Y2 493 aa11.88□□□□□ -0.51
SMG1-209ENST00000563836 POM121Q96HA1 1249 aa11.88□□□□□ -0.51
SMG1-209ENST00000563836 MBD5Q9P267 1494 aa11.88□□□□□ -0.51
SMG1-209ENST00000563836 ADH1CP00326 375 aa11.87□□□□□ -0.51
SMG1-209ENST00000563836 GRM5P41594 1212 aa11.87□□□□□ -0.51
SMG1-209ENST00000563836 ABL2P42684 1182 aa11.87□□□□□ -0.51
SMG1-209ENST00000563836 SLC10A4Q96EP9 437 aa11.87□□□□□ -0.51
SMG1-209ENST00000563836 CDV3Q9UKY7 258 aaKnown RBP11.87□□□□□ -0.51
SMG1-209ENST00000563836 ZNF518AQ6AHZ1 1483 aa11.87□□□□□ -0.51
SMG1-209ENST00000563836 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
SMG1-209ENST00000563836 AVPP01185 164 aa11.86□□□□□ -0.51
SMG1-209ENST00000563836 ARID5BQ14865 1188 aa11.86□□□□□ -0.51
SMG1-209ENST00000563836 GTF3C3Q9Y5Q9 886 aa11.86□□□□□ -0.51
SMG1-209ENST00000563836 WASF2Q9Y6W5 498 aa11.86□□□□□ -0.51
SMG1-209ENST00000563836 KIF15Q9NS87 1388 aa11.86□□□□□ -0.51
SMG1-209ENST00000563836 RTEL1-TNFRSF6BF6WH68 1400 aa11.86□□□□□ -0.51
SMG1-209ENST00000563836 ANKRD50Q9ULJ7 1429 aa11.86□□□□□ -0.51
SMG1-209ENST00000563836 PLXNC1O60486 1568 aa11.85□□□□□ -0.51
SMG1-209ENST00000563836 Q6ZNB5 142 aa11.85□□□□□ -0.51
SMG1-209ENST00000563836 VASH1Q7L8A9 365 aaPredicted RBP11.85□□□□□ -0.51
SMG1-209ENST00000563836 DENND4BO75064 1496 aaPredicted RBP11.84□□□□□ -0.51
SMG1-209ENST00000563836 RAD21O60216 631 aa11.84□□□□□ -0.51
SMG1-209ENST00000563836 NR5A1Q13285 461 aa11.84□□□□□ -0.51
SMG1-209ENST00000563836 DUOX2Q9NRD8 1548 aa11.84□□□□□ -0.51
SMG1-209ENST00000563836 DZIP3Q86Y13 1208 aaKnown RBP11.83□□□□□ -0.52
SMG1-209ENST00000563836 HPS1Q92902 700 aa11.83□□□□□ -0.52
SMG1-209ENST00000563836 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.52
SMG1-209ENST00000563836 DHX57Q6P158 1386 aaKnown RBP11.82□□□□□ -0.52
SMG1-209ENST00000563836 KIF13AQ9H1H9 1805 aa11.82□□□□□ -0.52
SMG1-209ENST00000563836 NNTQ13423 1086 aa11.82□□□□□ -0.52
SMG1-209ENST00000563836 WASHC4Q2M389 1173 aa11.82□□□□□ -0.52
SMG1-209ENST00000563836 AFAP1Q8N556 730 aa11.82□□□□□ -0.52
SMG1-209ENST00000563836 TRAPPC8Q9Y2L5 1435 aa11.82□□□□□ -0.52
SMG1-209ENST00000563836 ATP7AQ04656 1500 aa11.81□□□□□ -0.52
SMG1-209ENST00000563836 MCCD1P59942 119 aaPredicted RBP11.81□□□□□ -0.52
SMG1-209ENST00000563836 MYT1Q01538 1121 aa11.81□□□□□ -0.52
SMG1-209ENST00000563836 KCTD15Q96SI1 283 aaPredicted RBP11.81□□□□□ -0.52
SMG1-209ENST00000563836 ARHGEF12Q9NZN5 1544 aa11.81□□□□□ -0.52
SMG1-209ENST00000563836 POGZQ7Z3K3 1410 aa11.8□□□□□ -0.52
SMG1-209ENST00000563836 ERBINQ96RT1 1412 aa11.8□□□□□ -0.52
SMG1-209ENST00000563836 LCE2BO14633 110 aa11.8□□□□□ -0.52
SMG1-209ENST00000563836 FSHRP23945 695 aa11.8□□□□□ -0.52
SMG1-209ENST00000563836 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
SMG1-209ENST00000563836 ZNF592Q92610 1267 aa11.8□□□□□ -0.52
SMG1-209ENST00000563836 PCDHB9Q9Y5E1 797 aa11.8□□□□□ -0.52
SMG1-209ENST00000563836 HECW2Q9P2P5 1572 aa11.79□□□□□ -0.52
SMG1-209ENST00000563836 NR3C2P08235 984 aa11.79□□□□□ -0.52
SMG1-209ENST00000563836 SMCPP49901 116 aaPredicted RBP11.79□□□□□ -0.52
SMG1-209ENST00000563836 VAC14Q08AM6 782 aa11.79□□□□□ -0.52
SMG1-209ENST00000563836 CTC1Q2NKJ3 1217 aa11.79□□□□□ -0.52
SMG1-209ENST00000563836 CRIPAKQ8N1N5 446 aa11.79□□□□□ -0.52
SMG1-209ENST00000563836 CLUAP1Q96AJ1 413 aa11.79□□□□□ -0.52
SMG1-209ENST00000563836 KANK1Q14678 1352 aa11.79□□□□□ -0.52
SMG1-209ENST00000563836 ZFYVE16Q7Z3T8 1539 aa11.78□□□□□ -0.52
SMG1-209ENST00000563836 TRAF7Q6Q0C0 670 aa11.78□□□□□ -0.52
SMG1-209ENST00000563836 WWC1Q8IX03 1113 aa11.78□□□□□ -0.52
SMG1-209ENST00000563836 INO80Q9ULG1 1556 aaPredicted RBP11.78□□□□□ -0.52
SMG1-209ENST00000563836 ESPNB1AK53 854 aa11.77□□□□□ -0.53
SMG1-209ENST00000563836 EIF4G2P78344 907 aaKnown RBP eCLIP11.77□□□□□ -0.53
SMG1-209ENST00000563836 MPHOSPH9Q99550 1183 aa11.77□□□□□ -0.53
SMG1-209ENST00000563836 KLF16Q9BXK1 252 aaPredicted RBP11.77□□□□□ -0.53
SMG1-209ENST00000563836 NUP155O75694 1391 aa11.77□□□□□ -0.53
SMG1-209ENST00000563836 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
SMG1-209ENST00000563836 KDM5CP41229 1560 aa11.76□□□□□ -0.53
SMG1-209ENST00000563836 A6NJR5 290 aa11.76□□□□□ -0.53
SMG1-209ENST00000563836 INTS6LQ5JSJ4 861 aaKnown RBP11.76□□□□□ -0.53
SMG1-209ENST00000563836 AAASQ9NRG9 546 aa11.76□□□□□ -0.53
SMG1-209ENST00000563836 EIF2AK4Q9P2K8 1649 aaKnown RBP11.75□□□□□ -0.53
SMG1-209ENST00000563836 SEPT12Q8IYM1 358 aa11.75□□□□□ -0.53
SMG1-209ENST00000563836 CCDC116Q8IYX3 515 aa11.75□□□□□ -0.53
SMG1-209ENST00000563836 FNBP4Q8N3X1 1017 aaPredicted RBP11.75□□□□□ -0.53
SMG1-209ENST00000563836 MAGI2Q86UL8 1455 aa11.75□□□□□ -0.53
SMG1-209ENST00000563836 RICTORQ6R327 1708 aa11.74□□□□□ -0.53
SMG1-209ENST00000563836 RAPGEF3O95398 923 aa11.74□□□□□ -0.53
SMG1-209ENST00000563836 TIMELESSQ9UNS1 1208 aa11.74□□□□□ -0.53
SMG1-209ENST00000563836 DHX29Q7Z478 1369 aaKnown RBP11.74□□□□□ -0.53
SMG1-209ENST00000563836 KDM6BO15054 1643 aa11.74□□□□□ -0.53
SMG1-209ENST00000563836 PPRC1Q5VV67 1664 aaKnown RBP11.74□□□□□ -0.53
SMG1-209ENST00000563836 KIDINS220Q9ULH0 1771 aa11.74□□□□□ -0.53
SMG1-209ENST00000563836 AXIN1O15169 862 aa11.73□□□□□ -0.53
SMG1-209ENST00000563836 A2MP01023 1474 aa11.73□□□□□ -0.53
SMG1-209ENST00000563836 TIMP2P16035 220 aa11.73□□□□□ -0.53
SMG1-209ENST00000563836 SOX11P35716 441 aa11.73□□□□□ -0.53
SMG1-209ENST00000563836 WDR4P57081 412 aaKnown RBP11.73□□□□□ -0.53
SMG1-209ENST00000563836 DHX9Q08211 1270 aaKnown RBP11.73□□□□□ -0.53
SMG1-209ENST00000563836 NEUROD1Q13562 356 aa11.73□□□□□ -0.53
SMG1-209ENST00000563836 PROSER2Q86WR7 435 aaPredicted RBP11.73□□□□□ -0.53
SMG1-209ENST00000563836 TONSLQ96HA7 1378 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms