RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 LGR6Q9HBX8 967 aa20.06■□□□□ 0.8
PDXDC1-209ENST00000563667 PCDH11XQ9BZA7 1347 aa20.05■□□□□ 0.8
PDXDC1-209ENST00000563667 PCDH11YQ9BZA8 1340 aa20.05■□□□□ 0.8
PDXDC1-209ENST00000563667 RNMTO43148 476 aaKnown RBP20.05■□□□□ 0.8
PDXDC1-209ENST00000563667 DDX54Q8TDD1 881 aaKnown RBP20.05■□□□□ 0.8
PDXDC1-209ENST00000563667 CYP27B1O15528 508 aa20.04■□□□□ 0.8
PDXDC1-209ENST00000563667 ZNF853P0CG23 659 aa20.04■□□□□ 0.8
PDXDC1-209ENST00000563667 ACSBG1Q96GR2 724 aa20.04■□□□□ 0.8
PDXDC1-209ENST00000563667 MBIPQ9NS73 344 aa20.04■□□□□ 0.8
PDXDC1-209ENST00000563667 RCAN3Q9UKA8 241 aa20.04■□□□□ 0.8
PDXDC1-209ENST00000563667 SUPT16HQ9Y5B9 1047 aaKnown RBP20.04■□□□□ 0.8
PDXDC1-209ENST00000563667 PKD1L3Q7Z443 1732 aa20.04■□□□□ 0.8
PDXDC1-209ENST00000563667 BCL9O00512 1426 aa20.03■□□□□ 0.8
PDXDC1-209ENST00000563667 HSP90AB1P08238 724 aaKnown RBP20.03■□□□□ 0.8
PDXDC1-209ENST00000563667 EXOSC9Q06265 439 aaKnown RBP20.03■□□□□ 0.8
PDXDC1-209ENST00000563667 TEFQ10587 303 aa20.03■□□□□ 0.8
PDXDC1-209ENST00000563667 PTF1AQ7RTS3 328 aa20.03■□□□□ 0.8
PDXDC1-209ENST00000563667 R3HDM1Q15032 1099 aaKnown RBP20.02■□□□□ 0.8
PDXDC1-209ENST00000563667 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
PDXDC1-209ENST00000563667 MIS18AQ9NYP9 233 aa20.02■□□□□ 0.8
PDXDC1-209ENST00000563667 TSPYL4Q9UJ04 414 aa20.02■□□□□ 0.8
PDXDC1-209ENST00000563667 CHL1O00533 1208 aa20.01■□□□□ 0.79
PDXDC1-209ENST00000563667 NBPF14Q5TI25 921 aa20.01■□□□□ 0.79
PDXDC1-209ENST00000563667 CEMIPQ8WUJ3 1361 aa20■□□□□ 0.79
PDXDC1-209ENST00000563667 PLSCR1O15162 318 aa20■□□□□ 0.79
PDXDC1-209ENST00000563667 KCNQ2O43526 872 aa20■□□□□ 0.79
PDXDC1-209ENST00000563667 DCAF5Q96JK2 942 aa20■□□□□ 0.79
PDXDC1-209ENST00000563667 KDM6AO15550 1401 aaPredicted RBP19.97■□□□□ 0.79
PDXDC1-209ENST00000563667 BABAM1Q9NWV8 329 aa19.97■□□□□ 0.79
PDXDC1-209ENST00000563667 BTBD11A6QL63 1104 aa19.96■□□□□ 0.79
PDXDC1-209ENST00000563667 CABP4P57796 275 aa19.96■□□□□ 0.79
PDXDC1-209ENST00000563667 SYTL4Q96C24 671 aaPredicted RBP19.96■□□□□ 0.79
PDXDC1-209ENST00000563667 SBF2Q86WG5 1849 aa19.95■□□□□ 0.78
PDXDC1-209ENST00000563667 ELL2O00472 640 aaPredicted RBP19.95■□□□□ 0.78
PDXDC1-209ENST00000563667 CT47B1P0C2W7 299 aaPredicted RBP19.95■□□□□ 0.78
PDXDC1-209ENST00000563667 NKX1-1Q15270 411 aaPredicted RBP19.95■□□□□ 0.78
PDXDC1-209ENST00000563667 SLC52A2Q9HAB3 445 aa19.95■□□□□ 0.78
PDXDC1-209ENST00000563667 NEFLP07196 543 aa19.94■□□□□ 0.78
PDXDC1-209ENST00000563667 C8orf58Q8NAV2 365 aa19.94■□□□□ 0.78
PDXDC1-209ENST00000563667 RREB1Q92766 1687 aa19.94■□□□□ 0.78
PDXDC1-209ENST00000563667 SHANK3Q9BYB0 1731 aa19.93■□□□□ 0.78
PDXDC1-209ENST00000563667 TWISTNBQ3B726 338 aaPredicted RBP19.93■□□□□ 0.78
PDXDC1-209ENST00000563667 NFATC2IPQ8NCF5 419 aa19.93■□□□□ 0.78
PDXDC1-209ENST00000563667 SCN11AQ9UI33 1791 aa19.93■□□□□ 0.78
PDXDC1-209ENST00000563667 NHSQ6T4R5 1651 aa19.92■□□□□ 0.78
PDXDC1-209ENST00000563667 ADAMTS7Q9UKP4 1686 aa19.92■□□□□ 0.78
PDXDC1-209ENST00000563667 ERVV-2B6SEH9 535 aa19.92■□□□□ 0.78
PDXDC1-209ENST00000563667 TXNRD1Q16881 649 aa19.92■□□□□ 0.78
PDXDC1-209ENST00000563667 TSPYL6Q8N831 410 aa19.92■□□□□ 0.78
PDXDC1-209ENST00000563667 NUP188Q5SRE5 1749 aa19.91■□□□□ 0.78
PDXDC1-209ENST00000563667 VIRMAQ69YN4 1812 aaKnown RBP19.91■□□□□ 0.78
PDXDC1-209ENST00000563667 KRT24Q2M2I5 525 aa19.91■□□□□ 0.78
PDXDC1-209ENST00000563667 VAMP4O75379 141 aa19.9■□□□□ 0.78
PDXDC1-209ENST00000563667 BCAR3O75815 825 aa19.9■□□□□ 0.78
PDXDC1-209ENST00000563667 PRIM1P49642 420 aaKnown RBP19.9■□□□□ 0.78
PDXDC1-209ENST00000563667 RARSP54136 660 aaKnown RBP19.9■□□□□ 0.78
PDXDC1-209ENST00000563667 PROM2Q8N271 834 aa19.9■□□□□ 0.78
PDXDC1-209ENST00000563667 RGPD3A6NKT7 1758 aaPredicted RBP19.89■□□□□ 0.77
PDXDC1-209ENST00000563667 KCNQ3O43525 872 aa19.89■□□□□ 0.77
PDXDC1-209ENST00000563667 RRP1P56182 461 aaKnown RBP19.89■□□□□ 0.77
PDXDC1-209ENST00000563667 RGPD4Q7Z3J3 1758 aa19.89■□□□□ 0.77
PDXDC1-209ENST00000563667 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.88■□□□□ 0.77
PDXDC1-209ENST00000563667 BCL2L13Q9BXK5 485 aa19.88■□□□□ 0.77
PDXDC1-209ENST00000563667 STK32BQ9NY57 414 aa19.88■□□□□ 0.77
PDXDC1-209ENST00000563667 TMOD3Q9NYL9 352 aa19.88■□□□□ 0.77
PDXDC1-209ENST00000563667 MRC1P22897 1456 aa19.87■□□□□ 0.77
PDXDC1-209ENST00000563667 EIF4A1P60842 406 aaKnown RBP19.87■□□□□ 0.77
PDXDC1-209ENST00000563667 IRX6P78412 446 aaPredicted RBP19.87■□□□□ 0.77
PDXDC1-209ENST00000563667 SLC39A6Q13433 755 aa19.87■□□□□ 0.77
PDXDC1-209ENST00000563667 TTC5Q8N0Z6 440 aa19.87■□□□□ 0.77
PDXDC1-209ENST00000563667 ZNF428Q96B54 188 aa19.87■□□□□ 0.77
PDXDC1-209ENST00000563667 SMC4Q9NTJ3 1288 aa19.87■□□□□ 0.77
PDXDC1-209ENST00000563667 GTF3C3Q9Y5Q9 886 aa19.87■□□□□ 0.77
PDXDC1-209ENST00000563667 RNF123Q5XPI4 1314 aa19.86■□□□□ 0.77
PDXDC1-209ENST00000563667 PLIN1O60240 522 aa19.86■□□□□ 0.77
PDXDC1-209ENST00000563667 CANXP27824 592 aaKnown RBP19.86■□□□□ 0.77
PDXDC1-209ENST00000563667 ANO8Q9HCE9 1232 aaPredicted RBP19.86■□□□□ 0.77
PDXDC1-209ENST00000563667 SIPA1L3O60292 1781 aaPredicted RBP19.85■□□□□ 0.77
PDXDC1-209ENST00000563667 TCERG1O14776 1098 aaKnown RBP19.85■□□□□ 0.77
PDXDC1-209ENST00000563667 ALDH1L2Q3SY69 923 aa19.85■□□□□ 0.77
PDXDC1-209ENST00000563667 ZNF790Q6PG37 636 aa19.85■□□□□ 0.77
PDXDC1-209ENST00000563667 SSH1Q8WYL5 1049 aa19.85■□□□□ 0.77
PDXDC1-209ENST00000563667 KDM3BQ7LBC6 1761 aa19.85■□□□□ 0.77
PDXDC1-209ENST00000563667 FKBP8Q14318 412 aa19.84■□□□□ 0.77
PDXDC1-209ENST00000563667 FRAT1Q92837 279 aaPredicted RBP19.84■□□□□ 0.77
PDXDC1-209ENST00000563667 BTAF1O14981 1849 aa19.83■□□□□ 0.77
PDXDC1-209ENST00000563667 DOT1LQ8TEK3 1739 aa19.83■□□□□ 0.77
PDXDC1-209ENST00000563667 TOGARAM1Q9Y4F4 1720 aa19.82■□□□□ 0.76
PDXDC1-209ENST00000563667 SOS1Q07889 1333 aaPredicted RBP19.81■□□□□ 0.76
PDXDC1-209ENST00000563667 SLC15A2Q16348 729 aa19.81■□□□□ 0.76
PDXDC1-209ENST00000563667 PIGBQ92521 554 aa19.81■□□□□ 0.76
PDXDC1-209ENST00000563667 NECTIN2Q92692 538 aa19.81■□□□□ 0.76
PDXDC1-209ENST00000563667 LRP5O75197 1615 aa19.8■□□□□ 0.76
PDXDC1-209ENST00000563667 EIF2S2P20042 333 aaKnown RBP19.8■□□□□ 0.76
PDXDC1-209ENST00000563667 SLC27A3Q5K4L6 730 aa19.8■□□□□ 0.76
PDXDC1-209ENST00000563667 MRPL50Q8N5N7 158 aaKnown RBP19.8■□□□□ 0.76
PDXDC1-209ENST00000563667 FMNL2Q96PY5 1086 aa19.8■□□□□ 0.76
PDXDC1-209ENST00000563667 HDGFL1Q5TGJ6 251 aa19.79■□□□□ 0.76
PDXDC1-209ENST00000563667 CCDC30Q5VVM6 783 aa19.79■□□□□ 0.76
PDXDC1-209ENST00000563667 ZNF496Q96IT1 587 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms