RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 EIF2S2P20042 333 aaKnown RBP14.31□□□□□ -0.12
ABCA3-203ENST00000563623 CHMP3Q9Y3E7 222 aa14.31□□□□□ -0.12
ABCA3-203ENST00000563623 LRRFIP2Q9Y608 721 aaKnown RBP14.31□□□□□ -0.12
ABCA3-203ENST00000563623 FRMPD1Q5SYB0 1578 aa14.31□□□□□ -0.12
ABCA3-203ENST00000563623 HECW2Q9P2P5 1572 aa14.3□□□□□ -0.12
ABCA3-203ENST00000563623 FIBPO43427 364 aa14.3□□□□□ -0.12
ABCA3-203ENST00000563623 GADD45BO75293 160 aaPredicted RBP14.3□□□□□ -0.12
ABCA3-203ENST00000563623 SURF6O75683 361 aaKnown RBP14.3□□□□□ -0.12
ABCA3-203ENST00000563623 MCM2P49736 904 aa14.3□□□□□ -0.12
ABCA3-203ENST00000563623 CSPP1Q1MSJ5 1256 aa14.3□□□□□ -0.12
ABCA3-203ENST00000563623 PNMA6EA0A0J9YXQ4 647 aa14.29□□□□□ -0.12
ABCA3-203ENST00000563623 IBTKQ9P2D0 1353 aaPredicted RBP14.29□□□□□ -0.12
ABCA3-203ENST00000563623 GNAI3P08754 354 aa14.29□□□□□ -0.12
ABCA3-203ENST00000563623 DDX54Q8TDD1 881 aaKnown RBP14.29□□□□□ -0.12
ABCA3-203ENST00000563623 USP25Q9UHP3 1055 aa14.29□□□□□ -0.12
ABCA3-203ENST00000563623 EDC4Q6P2E9 1401 aaKnown RBP14.29□□□□□ -0.12
ABCA3-203ENST00000563623 PHF14O94880 888 aa14.29□□□□□ -0.12
ABCA3-203ENST00000563623 UBTFL1P0CB47 393 aaPredicted RBP14.29□□□□□ -0.12
ABCA3-203ENST00000563623 PAXIP1Q6ZW49 1069 aaPredicted RBP14.29□□□□□ -0.12
ABCA3-203ENST00000563623 NGDNQ8NEJ9 315 aaKnown RBP14.29□□□□□ -0.12
ABCA3-203ENST00000563623 CHMLP26374 656 aa14.28□□□□□ -0.12
ABCA3-203ENST00000563623 MTHFSDQ2M296 383 aaKnown RBP14.28□□□□□ -0.12
ABCA3-203ENST00000563623 USP48Q86UV5 1035 aa14.28□□□□□ -0.12
ABCA3-203ENST00000563623 MAP2P11137 1827 aaKnown RBP14.28□□□□□ -0.12
ABCA3-203ENST00000563623 KCNJ4P48050 445 aa14.28□□□□□ -0.12
ABCA3-203ENST00000563623 FLIIQ13045 1269 aa14.28□□□□□ -0.12
ABCA3-203ENST00000563623 CYB5RLQ6IPT4 315 aa14.28□□□□□ -0.12
ABCA3-203ENST00000563623 PIK3C2BO00750 1634 aa14.28□□□□□ -0.12
ABCA3-203ENST00000563623 ARHGEF40Q8TER5 1519 aa14.27□□□□□ -0.12
ABCA3-203ENST00000563623 UNC5CLQ8IV45 518 aa14.27□□□□□ -0.12
ABCA3-203ENST00000563623 ATP10DQ9P241 1426 aa14.27□□□□□ -0.13
ABCA3-203ENST00000563623 HS1BP3Q53T59 392 aa14.27□□□□□ -0.13
ABCA3-203ENST00000563623 ACEP12821 1306 aa14.27□□□□□ -0.13
ABCA3-203ENST00000563623 BRD1O95696 1058 aa14.26□□□□□ -0.13
ABCA3-203ENST00000563623 CCDC30Q5VVM6 783 aa14.26□□□□□ -0.13
ABCA3-203ENST00000563623 NAP1L2Q9ULW6 460 aaPredicted RBP14.26□□□□□ -0.13
ABCA3-203ENST00000563623 WDR33Q9C0J8 1336 aaKnown RBP14.26□□□□□ -0.13
ABCA3-203ENST00000563623 SIGLEC1Q9BZZ2 1709 aa14.26□□□□□ -0.13
ABCA3-203ENST00000563623 TTC21BQ7Z4L5 1316 aa14.26□□□□□ -0.13
ABCA3-203ENST00000563623 PRDM10Q9NQV6 1147 aa14.26□□□□□ -0.13
ABCA3-203ENST00000563623 SMC3Q9UQE7 1217 aa14.26□□□□□ -0.13
ABCA3-203ENST00000563623 CNPY2Q9Y2B0 182 aa14.26□□□□□ -0.13
ABCA3-203ENST00000563623 KIF24Q5T7B8 1368 aa14.26□□□□□ -0.13
ABCA3-203ENST00000563623 VPS37CA5D8V6 355 aaPredicted RBP14.26□□□□□ -0.13
ABCA3-203ENST00000563623 C17orf53Q8N3J3 647 aaPredicted RBP14.26□□□□□ -0.13
ABCA3-203ENST00000563623 HCLS1P14317 486 aaPredicted RBP14.25□□□□□ -0.13
ABCA3-203ENST00000563623 FAM69CQ0P6D2 419 aa14.25□□□□□ -0.13
ABCA3-203ENST00000563623 CWC27Q6UX04 472 aaKnown RBP14.25□□□□□ -0.13
ABCA3-203ENST00000563623 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.25□□□□□ -0.13
ABCA3-203ENST00000563623 CPA1P15085 419 aa14.25□□□□□ -0.13
ABCA3-203ENST00000563623 ALKQ9UM73 1620 aa14.25□□□□□ -0.13
ABCA3-203ENST00000563623 TSC1Q92574 1164 aa14.24□□□□□ -0.13
ABCA3-203ENST00000563623 TTC12Q9H892 705 aaPredicted RBP14.24□□□□□ -0.13
ABCA3-203ENST00000563623 SPG7Q9UQ90 795 aa14.24□□□□□ -0.13
ABCA3-203ENST00000563623 ZNF500O60304 480 aaPredicted RBP14.24□□□□□ -0.13
ABCA3-203ENST00000563623 PDLIM2Q96JY6 352 aa14.24□□□□□ -0.13
ABCA3-203ENST00000563623 HDGFP51858 240 aaKnown RBP14.24□□□□□ -0.13
ABCA3-203ENST00000563623 FAM177BA6PVY3 158 aa14.23□□□□□ -0.13
ABCA3-203ENST00000563623 SPC24Q8NBT2 197 aa14.23□□□□□ -0.13
ABCA3-203ENST00000563623 SLC26A8Q96RN1 970 aa14.23□□□□□ -0.13
ABCA3-203ENST00000563623 METP08581 1390 aa14.23□□□□□ -0.13
ABCA3-203ENST00000563623 ATP8B2P98198 1209 aa14.23□□□□□ -0.13
ABCA3-203ENST00000563623 SASS6Q6UVJ0 657 aa14.23□□□□□ -0.13
ABCA3-203ENST00000563623 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.23□□□□□ -0.13
ABCA3-203ENST00000563623 ATP7BP35670 1465 aa14.23□□□□□ -0.13
ABCA3-203ENST00000563623 CDK12Q9NYV4 1490 aaPredicted RBP14.23□□□□□ -0.13
ABCA3-203ENST00000563623 MAP3K19Q56UN5 1328 aa14.23□□□□□ -0.13
ABCA3-203ENST00000563623 SRGAP3O43295 1099 aa14.23□□□□□ -0.13
ABCA3-203ENST00000563623 HDGFL1Q5TGJ6 251 aa14.23□□□□□ -0.13
ABCA3-203ENST00000563623 DIAPH3Q9NSV4 1193 aa14.23□□□□□ -0.13
ABCA3-203ENST00000563623 MYO5BQ9ULV0 1848 aa14.22□□□□□ -0.13
ABCA3-203ENST00000563623 PRR36Q9H6K5 1346 aa14.22□□□□□ -0.13
ABCA3-203ENST00000563623 ADCY5O95622 1261 aa14.22□□□□□ -0.13
ABCA3-203ENST00000563623 PLCD3Q8N3E9 789 aa14.22□□□□□ -0.13
ABCA3-203ENST00000563623 SRCIN1Q9C0H9 1055 aa14.22□□□□□ -0.13
ABCA3-203ENST00000563623 CCDC83Q8IWF9 413 aa14.22□□□□□ -0.13
ABCA3-203ENST00000563623 NLRP6P59044 892 aa14.21□□□□□ -0.13
ABCA3-203ENST00000563623 GIMAP6Q6P9H5 292 aa14.21□□□□□ -0.13
ABCA3-203ENST00000563623 PPP1R42Q7Z4L9 355 aa14.21□□□□□ -0.13
ABCA3-203ENST00000563623 JARID2Q92833 1246 aaPredicted RBP14.21□□□□□ -0.13
ABCA3-203ENST00000563623 ARHGAP31Q2M1Z3 1444 aa14.21□□□□□ -0.13
ABCA3-203ENST00000563623 AATKQ6ZMQ8 1374 aa14.21□□□□□ -0.13
ABCA3-203ENST00000563623 ANXA1P04083 346 aa14.21□□□□□ -0.13
ABCA3-203ENST00000563623 USHBP1Q8N6Y0 703 aa14.21□□□□□ -0.13
ABCA3-203ENST00000563623 CASTP20810 708 aaKnown RBP14.21□□□□□ -0.14
ABCA3-203ENST00000563623 MCM5P33992 734 aa14.21□□□□□ -0.14
ABCA3-203ENST00000563623 MAP7D2Q96T17 732 aa14.21□□□□□ -0.14
ABCA3-203ENST00000563623 OSBPL3Q9H4L5 887 aa14.21□□□□□ -0.14
ABCA3-203ENST00000563623 KIAA0232Q92628 1395 aa14.2□□□□□ -0.14
ABCA3-203ENST00000563623 DRC7Q8IY82 874 aa14.2□□□□□ -0.14
ABCA3-203ENST00000563623 CPS1P31327 1500 aa14.2□□□□□ -0.14
ABCA3-203ENST00000563623 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.2□□□□□ -0.14
ABCA3-203ENST00000563623 PHAXQ9H814 394 aaKnown RBP14.2□□□□□ -0.14
ABCA3-203ENST00000563623 GOLGA6L4A6NEF3 574 aa14.2□□□□□ -0.14
ABCA3-203ENST00000563623 CDK11BP21127 795 aaKnown RBP14.2□□□□□ -0.14
ABCA3-203ENST00000563623 ANAPC15P60006 121 aa14.2□□□□□ -0.14
ABCA3-203ENST00000563623 CUL4AQ13619 759 aa14.2□□□□□ -0.14
ABCA3-203ENST00000563623 CCDC183Q5T5S1 534 aa14.2□□□□□ -0.14
ABCA3-203ENST00000563623 FERMT3Q86UX7 667 aa14.2□□□□□ -0.14
ABCA3-203ENST00000563623 CNTROBQ8N137 903 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms